RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 NDUFB1O75438 58 aa8.91□□□□□ -0.98
COPS3-201ENST00000268717 COX7CP15954 63 aa8.91□□□□□ -0.98
COPS3-201ENST00000268717 HCG22E2RYF7 251 aa8.9□□□□□ -0.99
COPS3-201ENST00000268717 UQCRQO14949 82 aa8.9□□□□□ -0.99
COPS3-201ENST00000268717 TRAV7A0A075B6U4 112 aa8.89□□□□□ -0.99
COPS3-201ENST00000268717 LIMD2Q9BT23 127 aa8.89□□□□□ -0.99
COPS3-201ENST00000268717 TNXBP22105 4242 aa8.88□□□□□ -0.99
COPS3-201ENST00000268717 RPS29P62273 56 aaKnown RBP8.88□□□□□ -0.99
COPS3-201ENST00000268717 SPINK1P00995 79 aa8.87□□□□□ -0.99
COPS3-201ENST00000268717 SPAG11AQ6PDA7 123 aa8.87□□□□□ -0.99
COPS3-201ENST00000268717 C4orf48Q5BLP8 95 aa8.86□□□□□ -0.99
COPS3-201ENST00000268717 PRR26Q8N8Z3 221 aa8.85□□□□□ -0.99
COPS3-201ENST00000268717 CCDC179H3BU77 68 aa8.84□□□□□ -0.99
COPS3-201ENST00000268717 OCR1Q9BZK8 76 aa8.83□□□□□ -1
COPS3-201ENST00000268717 A0A1B0GVX0 72 aa8.83□□□□□ -1
COPS3-201ENST00000268717 MT1HL1P0DM35 61 aa8.83□□□□□ -1
COPS3-201ENST00000268717 LINC00304Q8N9R0 145 aa8.83□□□□□ -1
COPS3-201ENST00000268717 MMP24-AS1A0A0U1RRL7 71 aa8.81□□□□□ -1
COPS3-201ENST00000268717 CASC2Q6XLA1 102 aa8.8□□□□□ -1
COPS3-201ENST00000268717 C1orf195Q5TG92 126 aa8.8□□□□□ -1
COPS3-201ENST00000268717 C8orf17Q9NRJ1 99 aa8.79□□□□□ -1
COPS3-201ENST00000268717 WFDC13Q8IUB5 93 aa8.78□□□□□ -1
COPS3-201ENST00000268717 IGHV6-1A0A0B4J1U7 121 aa8.76□□□□□ -1.01
COPS3-201ENST00000268717 hDV103S1A0JD37 113 aa8.76□□□□□ -1.01
COPS3-201ENST00000268717 HMCN2Q8NDA2 5059 aa8.76□□□□□ -1.01
COPS3-201ENST00000268717 C8orf87E5RJ46 101 aa8.76□□□□□ -1.01
COPS3-201ENST00000268717 TMEM254Q8TBM7 123 aa8.72□□□□□ -1.01
COPS3-201ENST00000268717 KRTAP10-8P60410 259 aa8.72□□□□□ -1.01
COPS3-201ENST00000268717 KLKP1Q107X0 134 aa8.72□□□□□ -1.01
COPS3-201ENST00000268717 C20orf197Q8N268 126 aa8.7□□□□□ -1.02
COPS3-201ENST00000268717 C5orf47Q569G3 176 aa8.69□□□□□ -1.02
COPS3-201ENST00000268717 MRPL34Q9BQ48 92 aaKnown RBP8.69□□□□□ -1.02
COPS3-201ENST00000268717 TP53AIP1Q9HCN2 124 aa8.69□□□□□ -1.02
COPS3-201ENST00000268717 NOTCH2NLQ7Z3S9 236 aa8.66□□□□□ -1.02
COPS3-201ENST00000268717 LINC00313P59037 77 aa8.65□□□□□ -1.02
COPS3-201ENST00000268717 A0A0U1RQV1 116 aa8.65□□□□□ -1.03
COPS3-201ENST00000268717 NDUFC1O43677 76 aa8.64□□□□□ -1.03
COPS3-201ENST00000268717 H3BPC8 53 aa8.62□□□□□ -1.03
COPS3-201ENST00000268717 CYSTM1Q9H1C7 97 aa8.62□□□□□ -1.03
COPS3-201ENST00000268717 MP68P56378 58 aa8.61□□□□□ -1.03
COPS3-201ENST00000268717 SNURFQ9Y675 71 aa8.6□□□□□ -1.03
COPS3-201ENST00000268717 TRAV22A0A0B4J277 110 aa8.59□□□□□ -1.03
COPS3-201ENST00000268717 TMEM258P61165 79 aa8.59□□□□□ -1.03
COPS3-201ENST00000268717 Q8N9P0 234 aaPredicted RBP8.59□□□□□ -1.03
COPS3-201ENST00000268717 ZCCHC13Q8WW36 166 aaKnown RBP8.59□□□□□ -1.03
COPS3-201ENST00000268717 KRTAP16-1A8MUX0 517 aa8.58□□□□□ -1.04
COPS3-201ENST00000268717 H0Y9P7 68 aa8.57□□□□□ -1.04
COPS3-201ENST00000268717 H7BZZ5 65 aa8.57□□□□□ -1.04
COPS3-201ENST00000268717 NDUFS5O43920 106 aa8.57□□□□□ -1.04
COPS3-201ENST00000268717 UBR4Q5T4S7 5183 aa8.56□□□□□ -1.04
COPS3-201ENST00000268717 LRP2P98164 4655 aa8.53□□□□□ -1.04
COPS3-201ENST00000268717 LINC00208Q96KT6 92 aa8.51□□□□□ -1.05
COPS3-201ENST00000268717 FP248Q71RG6 208 aaPredicted RBP8.51□□□□□ -1.05
COPS3-201ENST00000268717 KRTAP13-3Q3SY46 172 aa8.49□□□□□ -1.05
COPS3-201ENST00000268717 C1orf64Q8NEQ6 169 aa8.49□□□□□ -1.05
COPS3-201ENST00000268717 ATP5EP56381 51 aaPredicted RBP8.47□□□□□ -1.05
COPS3-201ENST00000268717 RETNLBQ9BQ08 111 aa8.47□□□□□ -1.05
COPS3-201ENST00000268717 FAM236DA0A1B0GTK5 79 aa8.45□□□□□ -1.06
COPS3-201ENST00000268717 FAM236CP0DP71 79 aa8.45□□□□□ -1.06
COPS3-201ENST00000268717 LOC101927531A0A1B0GV80 90 aa8.44□□□□□ -1.06
COPS3-201ENST00000268717 Q5W150 140 aa8.43□□□□□ -1.06
COPS3-201ENST00000268717 C20orf166-AS1Q96NR2 134 aa8.43□□□□□ -1.06
COPS3-201ENST00000268717 LPAP08519 4548 aa8.42□□□□□ -1.06
COPS3-201ENST00000268717 LCE2DQ5TA82 110 aaPredicted RBP8.42□□□□□ -1.06
COPS3-201ENST00000268717 A8MUU9 505 aa8.4□□□□□ -1.06
COPS3-201ENST00000268717 SPANXA2-OT1Q8N9U9 137 aa8.4□□□□□ -1.07
COPS3-201ENST00000268717 C9orf92A6NGG3 77 aa8.37□□□□□ -1.07
COPS3-201ENST00000268717 RPS28P62857 69 aaKnown RBP8.36□□□□□ -1.07
COPS3-201ENST00000268717 IGLV7-46A0A075B6I9 117 aa8.34□□□□□ -1.07
COPS3-201ENST00000268717 PRR4Q16378 134 aa8.34□□□□□ -1.07
COPS3-201ENST00000268717 Q75L30 129 aa8.34□□□□□ -1.07
COPS3-201ENST00000268717 CYP4F30PQ9H0H9 118 aa8.34□□□□□ -1.07
COPS3-201ENST00000268717 RNF213Q63HN8 5207 aa8.34□□□□□ -1.07
COPS3-201ENST00000268717 IGKV2-30P06310 120 aa8.33□□□□□ -1.08
COPS3-201ENST00000268717 SERP1Q9Y6X1 66 aa8.31□□□□□ -1.08
COPS3-201ENST00000268717 PCOTHQ58A44 107 aa8.28□□□□□ -1.08
COPS3-201ENST00000268717 TPRXLQ17RH7 258 aa8.24□□□□□ -1.09
COPS3-201ENST00000268717 C7orf65Q6ZTY9 151 aa8.24□□□□□ -1.09
COPS3-201ENST00000268717 XP32Q5T750 250 aa8.22□□□□□ -1.09
COPS3-201ENST00000268717 IGKV2D-30A0A075B6S6 120 aa8.21□□□□□ -1.09
COPS3-201ENST00000268717 RPL37P61927 97 aaKnown RBP8.21□□□□□ -1.09
COPS3-201ENST00000268717 HRES1P13985 223 aa8.19□□□□□ -1.1
COPS3-201ENST00000268717 ATP11AUNQ6ZP68 121 aa8.18□□□□□ -1.1
COPS3-201ENST00000268717 MUC2Q02817 5179 aa8.14□□□□□ -1.11
COPS3-201ENST00000268717 DMAC1Q96GE9 116 aa8.14□□□□□ -1.11
COPS3-201ENST00000268717 MUC17Q685J3 4493 aa8.11□□□□□ -1.11
COPS3-201ENST00000268717 SMIM26A0A096LP01 95 aa8.11□□□□□ -1.11
COPS3-201ENST00000268717 SPINK7P58062 85 aa8.11□□□□□ -1.11
COPS3-201ENST00000268717 ACYP2P14621 99 aa8.08□□□□□ -1.12
COPS3-201ENST00000268717 COA5Q86WW8 74 aa8.08□□□□□ -1.12
COPS3-201ENST00000268717 A8MUN3 132 aa8.07□□□□□ -1.12
COPS3-201ENST00000268717 KRTAP3-3Q9BYR6 98 aa8.06□□□□□ -1.12
COPS3-201ENST00000268717 KRTAP3-2Q9BYR7 98 aa8.06□□□□□ -1.12
COPS3-201ENST00000268717 C4orf26Q17RF5 130 aa7.99□□□□□ -1.13
COPS3-201ENST00000268717 COX6B2Q6YFQ2 88 aa7.95□□□□□ -1.14
COPS3-201ENST00000268717 Q1T7F1 81 aa7.94□□□□□ -1.14
COPS3-201ENST00000268717 V9GYY9 64 aa7.93□□□□□ -1.14
COPS3-201ENST00000268717 CHKB-CPT1BH3BT56 60 aa7.92□□□□□ -1.14
COPS3-201ENST00000268717 SEC61BP60468 96 aaKnown RBP7.92□□□□□ -1.14
COPS3-201ENST00000268717 KRTAP3-1Q9BYR8 98 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 186.6 ms