RNA–Protein interactions for RNA: ENST00000262659.12

CCM2L-201, Transcript of CCM2 like scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCM2L, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2L-201ENST00000262659 SPINK6Q6UWN8 80 aa14.01□□□□□ -0.17
CCM2L-201ENST00000262659 ZNF861PO60384 105 aa14□□□□□ -0.17
CCM2L-201ENST00000262659 MAST4O15021 2626 aa13.98□□□□□ -0.17
CCM2L-201ENST00000262659 PANO1I0J062 215 aa13.97□□□□□ -0.17
CCM2L-201ENST00000262659 LINC00483Q53H64 154 aa13.96□□□□□ -0.17
CCM2L-201ENST00000262659 NBEAL1Q6ZS30 2694 aa13.95□□□□□ -0.18
CCM2L-201ENST00000262659 WWC2-AS2Q96NR7 200 aa13.95□□□□□ -0.18
CCM2L-201ENST00000262659 ANAPC11Q9NYG5 84 aa13.95□□□□□ -0.18
CCM2L-201ENST00000262659 DNAH9Q9NYC9 4486 aa13.94□□□□□ -0.18
CCM2L-201ENST00000262659 C1orf134Q5TEV5 83 aa13.93□□□□□ -0.18
CCM2L-201ENST00000262659 CMYA5Q8N3K9 4069 aa13.91□□□□□ -0.18
CCM2L-201ENST00000262659 COL6A5A8TX70 2615 aa13.85□□□□□ -0.19
CCM2L-201ENST00000262659 NOTCH1P46531 2555 aa13.84□□□□□ -0.19
CCM2L-201ENST00000262659 C14orf177Q52M58 125 aa13.83□□□□□ -0.2
CCM2L-201ENST00000262659 IGKV2-30P06310 120 aa13.8□□□□□ -0.2
CCM2L-201ENST00000262659 KMT2BQ9UMN6 2715 aaPredicted RBP13.8□□□□□ -0.2
CCM2L-201ENST00000262659 IGLV7-43P04211 117 aa13.79□□□□□ -0.2
CCM2L-201ENST00000262659 ZNF706Q9Y5V0 76 aaPredicted RBP13.78□□□□□ -0.2
CCM2L-201ENST00000262659 FAM229AH3BQW9 127 aa13.77□□□□□ -0.21
CCM2L-201ENST00000262659 DNAH3Q8TD57 4116 aa13.76□□□□□ -0.21
CCM2L-201ENST00000262659 ROMO1P60602 79 aa13.74□□□□□ -0.21
CCM2L-201ENST00000262659 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.73□□□□□ -0.21
CCM2L-201ENST00000262659 FRAS1Q86XX4 4008 aa13.73□□□□□ -0.21
CCM2L-201ENST00000262659 KRTAP25-1Q3LHN0 102 aa13.71□□□□□ -0.21
CCM2L-201ENST00000262659 STAB1Q9NY15 2570 aa13.69□□□□□ -0.22
CCM2L-201ENST00000262659 DNAH8Q96JB1 4490 aa13.68□□□□□ -0.22
CCM2L-201ENST00000262659 HUWE1Q7Z6Z7 4374 aaKnown RBP13.67□□□□□ -0.22
CCM2L-201ENST00000262659 KRTAP24-1Q3LI83 254 aa13.65□□□□□ -0.22
CCM2L-201ENST00000262659 CIRBP-AS1Q8TBR5 109 aa13.65□□□□□ -0.22
CCM2L-201ENST00000262659 SPACA4Q8TDM5 124 aa13.65□□□□□ -0.22
CCM2L-201ENST00000262659 PSORS1C2Q9UIG4 136 aa13.64□□□□□ -0.23
CCM2L-201ENST00000262659 A8MUU9 505 aa13.64□□□□□ -0.23
CCM2L-201ENST00000262659 UBE2DNLQ8IWF7 75 aa13.63□□□□□ -0.23
CCM2L-201ENST00000262659 IGKV2D-30A0A075B6S6 120 aa13.61□□□□□ -0.23
CCM2L-201ENST00000262659 SPINK1P00995 79 aa13.6□□□□□ -0.23
CCM2L-201ENST00000262659 MEGF8Q7Z7M0 2845 aa13.59□□□□□ -0.23
CCM2L-201ENST00000262659 LINC00304Q8N9R0 145 aa13.59□□□□□ -0.23
CCM2L-201ENST00000262659 IGLV5-52A0A0A0MRZ9 124 aa13.58□□□□□ -0.24
CCM2L-201ENST00000262659 DNAH7Q8WXX0 4024 aa13.57□□□□□ -0.24
CCM2L-201ENST00000262659 H0YAA0 97 aa13.55□□□□□ -0.24
CCM2L-201ENST00000262659 Q6ZSA8 131 aa13.52□□□□□ -0.25
CCM2L-201ENST00000262659 STAB2Q8WWQ8 2551 aa13.49□□□□□ -0.25
CCM2L-201ENST00000262659 LY6G6CO95867 125 aa13.48□□□□□ -0.25
CCM2L-201ENST00000262659 FLG2Q5D862 2391 aaPredicted RBP13.46□□□□□ -0.25
CCM2L-201ENST00000262659 KRTAP16-1A8MUX0 517 aa13.45□□□□□ -0.26
CCM2L-201ENST00000262659 P0C880 135 aa13.43□□□□□ -0.26
CCM2L-201ENST00000262659 Q6ZRN7 208 aaPredicted RBP13.42□□□□□ -0.26
CCM2L-201ENST00000262659 CRIPTQ9P021 101 aa13.42□□□□□ -0.26
CCM2L-201ENST00000262659 APLNQ9ULZ1 77 aa13.41□□□□□ -0.26
CCM2L-201ENST00000262659 TGP01266 2768 aa13.41□□□□□ -0.26
CCM2L-201ENST00000262659 Q8N1X5 172 aa13.4□□□□□ -0.26
CCM2L-201ENST00000262659 DNAH17Q9UFH2 4485 aa13.38□□□□□ -0.27
CCM2L-201ENST00000262659 NBDYA0A0U1RRE5 68 aa13.36□□□□□ -0.27
CCM2L-201ENST00000262659 SSBP3-AS1Q7Z2R9 100 aa13.34□□□□□ -0.27
CCM2L-201ENST00000262659 HECTD4Q9Y4D8 3996 aa13.33□□□□□ -0.28
CCM2L-201ENST00000262659 TYMSOSQ8TAI1 123 aa13.33□□□□□ -0.28
CCM2L-201ENST00000262659 A0A1B0GU33 70 aa13.27□□□□□ -0.29
CCM2L-201ENST00000262659 PLECQ15149 4684 aaKnown RBP13.23□□□□□ -0.29
CCM2L-201ENST00000262659 VPS13DQ5THJ4 4388 aa13.22□□□□□ -0.29
CCM2L-201ENST00000262659 A0A087WTM6 91 aa13.21□□□□□ -0.29
CCM2L-201ENST00000262659 DYNC2H1Q8NCM8 4307 aaKnown RBP13.2□□□□□ -0.3
CCM2L-201ENST00000262659 H1FX-AS1Q4G0G2 97 aa13.17□□□□□ -0.3
CCM2L-201ENST00000262659 MGAM2Q2M2H8 2515 aa13.15□□□□□ -0.3
CCM2L-201ENST00000262659 KRTAP13-2Q52LG2 175 aa13.12□□□□□ -0.31
CCM2L-201ENST00000262659 K7ERS5 55 aa13.03□□□□□ -0.32
CCM2L-201ENST00000262659 KMT2AQ03164 3969 aa13.01□□□□□ -0.33
CCM2L-201ENST00000262659 FBN3Q75N90 2809 aa12.99□□□□□ -0.33
CCM2L-201ENST00000262659 SPINT4Q6UDR6 99 aa12.98□□□□□ -0.33
CCM2L-201ENST00000262659 STARD9Q9P2P6 4700 aa12.95□□□□□ -0.34
CCM2L-201ENST00000262659 KRTAP3-1Q9BYR8 98 aa12.93□□□□□ -0.34
CCM2L-201ENST00000262659 DNAH2Q9P225 4427 aa12.92□□□□□ -0.34
CCM2L-201ENST00000262659 COX6B2Q6YFQ2 88 aa12.91□□□□□ -0.34
CCM2L-201ENST00000262659 NDUFAF8A1L188 74 aa12.88□□□□□ -0.35
CCM2L-201ENST00000262659 TPRXLQ17RH7 258 aa12.88□□□□□ -0.35
CCM2L-201ENST00000262659 NUPR2A6NF83 97 aa12.87□□□□□ -0.35
CCM2L-201ENST00000262659 DNAH11Q96DT5 4516 aa12.87□□□□□ -0.35
CCM2L-201ENST00000262659 DNAH6Q9C0G6 4158 aa12.83□□□□□ -0.36
CCM2L-201ENST00000262659 C20orf166-AS1Q96NR2 134 aa12.79□□□□□ -0.36
CCM2L-201ENST00000262659 PRKDCP78527 4128 aaKnown RBP12.76□□□□□ -0.37
CCM2L-201ENST00000262659 KRTAP15-1Q3LI76 137 aa12.76□□□□□ -0.37
CCM2L-201ENST00000262659 KRTAP1-4P0C5Y4 121 aa12.75□□□□□ -0.37
CCM2L-201ENST00000262659 C10orf95Q9H7T3 257 aa12.73□□□□□ -0.37
CCM2L-201ENST00000262659 RPL37P61927 97 aaKnown RBP12.69□□□□□ -0.38
CCM2L-201ENST00000262659 LRP1BQ9NZR2 4599 aa12.66□□□□□ -0.38
CCM2L-201ENST00000262659 DNAH5Q8TE73 4624 aa12.62□□□□□ -0.39
CCM2L-201ENST00000262659 DMBT1Q9UGM3 2413 aaPredicted RBP12.62□□□□□ -0.39
CCM2L-201ENST00000262659 A0A0D9SG42 100 aa12.61□□□□□ -0.39
CCM2L-201ENST00000262659 KRTAP13-4Q3LI77 160 aa12.58□□□□□ -0.4
CCM2L-201ENST00000262659 C9orf92A6NGG3 77 aa12.56□□□□□ -0.4
CCM2L-201ENST00000262659 KRTAP10-2P60368 255 aa12.54□□□□□ -0.4
CCM2L-201ENST00000262659 VPS13BQ7Z7G8 4022 aa12.51□□□□□ -0.41
CCM2L-201ENST00000262659 KRTAP10-6P60371 365 aaPredicted RBP12.51□□□□□ -0.41
CCM2L-201ENST00000262659 A0A0A0MQY5 61 aa12.43□□□□□ -0.42
CCM2L-201ENST00000262659 KRTAP10-1P60331 282 aa12.37□□□□□ -0.43
CCM2L-201ENST00000262659 KRTAP3-2Q9BYR7 98 aa12.33□□□□□ -0.44
CCM2L-201ENST00000262659 KRTAP3-3Q9BYR6 98 aa12.3□□□□□ -0.44
CCM2L-201ENST00000262659 S4R3F8 94 aa12.3□□□□□ -0.44
CCM2L-201ENST00000262659 RPS29P62273 56 aaKnown RBP12.29□□□□□ -0.44
CCM2L-201ENST00000262659 FAT2Q9NYQ8 4349 aa12.27□□□□□ -0.45
CCM2L-201ENST00000262659 PKD1P98161 4303 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms