RNA–Protein interactions for RNA: ENST00000262067.4

TSPAN13-201, Transcript of tetraspanin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN13, Length 2,093 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-201ENST00000262067 KRTAP10-4P60372 401 aaPredicted RBP13.86□□□□□ -0.19
TSPAN13-201ENST00000262067 Q5XG85 94 aa13.85□□□□□ -0.19
TSPAN13-201ENST00000262067 ZCCHC13Q8WW36 166 aaKnown RBP13.81□□□□□ -0.2
TSPAN13-201ENST00000262067 FAM236DA0A1B0GTK5 79 aa13.81□□□□□ -0.2
TSPAN13-201ENST00000262067 FAM236CP0DP71 79 aa13.81□□□□□ -0.2
TSPAN13-201ENST00000262067 C1orf195Q5TG92 126 aa13.81□□□□□ -0.2
TSPAN13-201ENST00000262067 PRR26Q8N8Z3 221 aa13.81□□□□□ -0.2
TSPAN13-201ENST00000262067 FAT1Q14517 4588 aa13.79□□□□□ -0.2
TSPAN13-201ENST00000262067 C4orf48Q5BLP8 95 aa13.78□□□□□ -0.2
TSPAN13-201ENST00000262067 MP68P56378 58 aa13.77□□□□□ -0.21
TSPAN13-201ENST00000262067 LIMD2Q9BT23 127 aa13.76□□□□□ -0.21
TSPAN13-201ENST00000262067 MRPL34Q9BQ48 92 aaKnown RBP13.76□□□□□ -0.21
TSPAN13-201ENST00000262067 H0Y9P7 68 aa13.75□□□□□ -0.21
TSPAN13-201ENST00000262067 LINC00208Q96KT6 92 aa13.73□□□□□ -0.21
TSPAN13-201ENST00000262067 SPINK1P00995 79 aa13.72□□□□□ -0.21
TSPAN13-201ENST00000262067 NDUFS5O43920 106 aa13.71□□□□□ -0.21
TSPAN13-201ENST00000262067 TP53AIP1Q9HCN2 124 aa13.71□□□□□ -0.21
TSPAN13-201ENST00000262067 RPS28P62857 69 aaKnown RBP13.7□□□□□ -0.22
TSPAN13-201ENST00000262067 TRAV22A0A0B4J277 110 aa13.68□□□□□ -0.22
TSPAN13-201ENST00000262067 RYR3Q15413 4870 aa13.68□□□□□ -0.22
TSPAN13-201ENST00000262067 C8orf87E5RJ46 101 aa13.68□□□□□ -0.22
TSPAN13-201ENST00000262067 LINC00304Q8N9R0 145 aa13.68□□□□□ -0.22
TSPAN13-201ENST00000262067 H3BPC8 53 aa13.66□□□□□ -0.22
TSPAN13-201ENST00000262067 ATP5EP56381 51 aaPredicted RBP13.63□□□□□ -0.23
TSPAN13-201ENST00000262067 LINC00313P59037 77 aa13.63□□□□□ -0.23
TSPAN13-201ENST00000262067 C1orf64Q8NEQ6 169 aa13.63□□□□□ -0.23
TSPAN13-201ENST00000262067 OXTP01178 125 aa13.62□□□□□ -0.23
TSPAN13-201ENST00000262067 SPAG11AQ6PDA7 123 aa13.61□□□□□ -0.23
TSPAN13-201ENST00000262067 RPS29P62273 56 aaKnown RBP13.58□□□□□ -0.24
TSPAN13-201ENST00000262067 SERP1Q9Y6X1 66 aa13.58□□□□□ -0.24
TSPAN13-201ENST00000262067 FAM229AH3BQW9 127 aa13.57□□□□□ -0.24
TSPAN13-201ENST00000262067 Q5W150 140 aa13.51□□□□□ -0.25
TSPAN13-201ENST00000262067 KRTAP16-1A8MUX0 517 aa13.5□□□□□ -0.25
TSPAN13-201ENST00000262067 Q5VSD8 79 aa13.49□□□□□ -0.25
TSPAN13-201ENST00000262067 Q8N9P0 234 aaPredicted RBP13.49□□□□□ -0.25
TSPAN13-201ENST00000262067 PRR4Q16378 134 aa13.47□□□□□ -0.25
TSPAN13-201ENST00000262067 HSPG2P98160 4391 aa13.46□□□□□ -0.25
TSPAN13-201ENST00000262067 KRTAP13-3Q3SY46 172 aa13.46□□□□□ -0.25
TSPAN13-201ENST00000262067 PKHD1L1Q86WI1 4243 aa13.46□□□□□ -0.25
TSPAN13-201ENST00000262067 PCOTHQ58A44 107 aa13.41□□□□□ -0.26
TSPAN13-201ENST00000262067 KRTAP17-1Q9BYP8 105 aa13.4□□□□□ -0.26
TSPAN13-201ENST00000262067 CYP4F30PQ9H0H9 118 aa13.4□□□□□ -0.26
TSPAN13-201ENST00000262067 SPANXA2-OT1Q8N9U9 137 aa13.4□□□□□ -0.27
TSPAN13-201ENST00000262067 RYR1P21817 5038 aa13.38□□□□□ -0.27
TSPAN13-201ENST00000262067 RETNLBQ9BQ08 111 aa13.36□□□□□ -0.27
TSPAN13-201ENST00000262067 LOC101927531A0A1B0GV80 90 aa13.35□□□□□ -0.27
TSPAN13-201ENST00000262067 KRTAP10-8P60410 259 aa13.31□□□□□ -0.28
TSPAN13-201ENST00000262067 Q8N1X5 172 aa13.31□□□□□ -0.28
TSPAN13-201ENST00000262067 IGLV7-46A0A075B6I9 117 aa13.3□□□□□ -0.28
TSPAN13-201ENST00000262067 SMIM26A0A096LP01 95 aa13.28□□□□□ -0.28
TSPAN13-201ENST00000262067 LRP1Q07954 4544 aaKnown RBP13.27□□□□□ -0.28
TSPAN13-201ENST00000262067 KIAA1109Q2LD37 5005 aa13.25□□□□□ -0.29
TSPAN13-201ENST00000262067 FP248Q71RG6 208 aaPredicted RBP13.23□□□□□ -0.29
TSPAN13-201ENST00000262067 C9orf92A6NGG3 77 aa13.22□□□□□ -0.29
TSPAN13-201ENST00000262067 FLG2Q5D862 2391 aaPredicted RBP13.21□□□□□ -0.29
TSPAN13-201ENST00000262067 TNXBP22105 4242 aa13.2□□□□□ -0.3
TSPAN13-201ENST00000262067 IGKV2-30P06310 120 aa13.19□□□□□ -0.3
TSPAN13-201ENST00000262067 EPPK1P58107 5090 aaKnown RBP13.19□□□□□ -0.3
TSPAN13-201ENST00000262067 C4orf26Q17RF5 130 aa13.13□□□□□ -0.31
TSPAN13-201ENST00000262067 FAT3Q8TDW7 4589 aa13.11□□□□□ -0.31
TSPAN13-201ENST00000262067 HRES1P13985 223 aa13.1□□□□□ -0.31
TSPAN13-201ENST00000262067 IGKV2D-30A0A075B6S6 120 aa13.09□□□□□ -0.31
TSPAN13-201ENST00000262067 C20orf166-AS1Q96NR2 134 aa13.09□□□□□ -0.31
TSPAN13-201ENST00000262067 A8MUU9 505 aa13.09□□□□□ -0.31
TSPAN13-201ENST00000262067 COA5Q86WW8 74 aa13.08□□□□□ -0.32
TSPAN13-201ENST00000262067 MPLKIPQ8TAP9 179 aa13.08□□□□□ -0.32
TSPAN13-201ENST00000262067 MT1HL1P0DM35 61 aa13.04□□□□□ -0.32
TSPAN13-201ENST00000262067 MYCBP2O75592 4640 aa12.97□□□□□ -0.33
TSPAN13-201ENST00000262067 DMBT1Q9UGM3 2413 aaPredicted RBP12.96□□□□□ -0.33
TSPAN13-201ENST00000262067 C7orf65Q6ZTY9 151 aa12.94□□□□□ -0.34
TSPAN13-201ENST00000262067 Q1T7F1 81 aa12.93□□□□□ -0.34
TSPAN13-201ENST00000262067 DMAC1Q96GE9 116 aa12.93□□□□□ -0.34
TSPAN13-201ENST00000262067 Q75L30 129 aa12.91□□□□□ -0.34
TSPAN13-201ENST00000262067 ACYP2P14621 99 aa12.9□□□□□ -0.34
TSPAN13-201ENST00000262067 KRTAP4-5Q9BYR2 181 aa12.9□□□□□ -0.34
TSPAN13-201ENST00000262067 V9GYY9 64 aa12.79□□□□□ -0.36
TSPAN13-201ENST00000262067 PSPHP1O15172 72 aa12.76□□□□□ -0.37
TSPAN13-201ENST00000262067 SPINK7P58062 85 aa12.76□□□□□ -0.37
TSPAN13-201ENST00000262067 XP32Q5T750 250 aa12.75□□□□□ -0.37
TSPAN13-201ENST00000262067 CHKB-CPT1BH3BT56 60 aa12.72□□□□□ -0.37
TSPAN13-201ENST00000262067 RPL37P61927 97 aaKnown RBP12.72□□□□□ -0.37
TSPAN13-201ENST00000262067 ATP11AUNQ6ZP68 121 aa12.72□□□□□ -0.37
TSPAN13-201ENST00000262067 A8MUN3 132 aa12.71□□□□□ -0.38
TSPAN13-201ENST00000262067 PRR15LQ9BU68 103 aa12.65□□□□□ -0.39
TSPAN13-201ENST00000262067 LINC01558Q9Y6Z2 57 aa12.64□□□□□ -0.39
TSPAN13-201ENST00000262067 Q5VV11 94 aa12.61□□□□□ -0.39
TSPAN13-201ENST00000262067 KRTAP3-1Q9BYR8 98 aa12.58□□□□□ -0.39
TSPAN13-201ENST00000262067 TPRXLQ17RH7 258 aa12.54□□□□□ -0.4
TSPAN13-201ENST00000262067 ABCA13Q86UQ4 5058 aa12.53□□□□□ -0.4
TSPAN13-201ENST00000262067 BRK1Q8WUW1 75 aa12.5□□□□□ -0.41
TSPAN13-201ENST00000262067 BIRC6Q9NR09 4857 aa12.48□□□□□ -0.41
TSPAN13-201ENST00000262067 COX6B2Q6YFQ2 88 aa12.47□□□□□ -0.41
TSPAN13-201ENST00000262067 HERC2O95714 4834 aa12.44□□□□□ -0.42
TSPAN13-201ENST00000262067 J3QL48 77 aa12.44□□□□□ -0.42
TSPAN13-201ENST00000262067 PRO0628Q9UI54 55 aa12.37□□□□□ -0.43
TSPAN13-201ENST00000262067 LPAP08519 4548 aa12.35□□□□□ -0.43
TSPAN13-201ENST00000262067 LRP2P98164 4655 aa12.35□□□□□ -0.43
TSPAN13-201ENST00000262067 A0A1B0GU69 56 aa12.33□□□□□ -0.44
TSPAN13-201ENST00000262067 A6NED7 52 aa12.31□□□□□ -0.44
TSPAN13-201ENST00000262067 SPTSSBQ8NFR3 76 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms