RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 FAM236DA0A1B0GTK5 79 aa10.44□□□□□ -0.74
SSB-201ENST00000260956 FAM236CP0DP71 79 aa10.44□□□□□ -0.74
SSB-201ENST00000260956 WFDC13Q8IUB5 93 aa10.41□□□□□ -0.74
SSB-201ENST00000260956 MMP24-AS1A0A0U1RRL7 71 aa10.41□□□□□ -0.74
SSB-201ENST00000260956 ASB16-AS1Q495Z4 193 aa10.41□□□□□ -0.74
SSB-201ENST00000260956 FAM229AH3BQW9 127 aa10.4□□□□□ -0.74
SSB-201ENST00000260956 FLG2Q5D862 2391 aaPredicted RBP10.4□□□□□ -0.75
SSB-201ENST00000260956 CASC2Q6XLA1 102 aa10.37□□□□□ -0.75
SSB-201ENST00000260956 HRCT1Q6UXD1 115 aa10.36□□□□□ -0.75
SSB-201ENST00000260956 C5orf47Q569G3 176 aa10.35□□□□□ -0.75
SSB-201ENST00000260956 CD164Q04900 197 aa10.33□□□□□ -0.76
SSB-201ENST00000260956 LRP1Q07954 4544 aaKnown RBP10.33□□□□□ -0.76
SSB-201ENST00000260956 ATP5EP56381 51 aaPredicted RBP10.33□□□□□ -0.76
SSB-201ENST00000260956 PLA2G1BP04054 148 aaKnown RBP10.32□□□□□ -0.76
SSB-201ENST00000260956 SERP1Q9Y6X1 66 aa10.31□□□□□ -0.76
SSB-201ENST00000260956 KRTAP13-2Q52LG2 175 aa10.3□□□□□ -0.76
SSB-201ENST00000260956 SSBP3-AS1Q7Z2R9 100 aa10.3□□□□□ -0.76
SSB-201ENST00000260956 A0A087X002 238 aa10.3□□□□□ -0.76
SSB-201ENST00000260956 KRTAP1-4P0C5Y4 121 aa10.29□□□□□ -0.76
SSB-201ENST00000260956 A0A1B0GVX0 72 aa10.28□□□□□ -0.76
SSB-201ENST00000260956 NDUFB1O75438 58 aa10.28□□□□□ -0.76
SSB-201ENST00000260956 FAM229BQ4G0N7 80 aa10.28□□□□□ -0.76
SSB-201ENST00000260956 C8orf17Q9NRJ1 99 aa10.28□□□□□ -0.76
SSB-201ENST00000260956 PKHD1L1Q86WI1 4243 aa10.27□□□□□ -0.76
SSB-201ENST00000260956 hDV103S1A0JD37 113 aa10.26□□□□□ -0.77
SSB-201ENST00000260956 HERC1Q15751 4861 aa10.22□□□□□ -0.77
SSB-201ENST00000260956 FAT3Q8TDW7 4589 aa10.22□□□□□ -0.77
SSB-201ENST00000260956 NOTCH2NLQ7Z3S9 236 aa10.21□□□□□ -0.77
SSB-201ENST00000260956 H3BPC8 53 aa10.21□□□□□ -0.78
SSB-201ENST00000260956 Q5XG85 94 aa10.21□□□□□ -0.78
SSB-201ENST00000260956 TRAV22A0A0B4J277 110 aa10.2□□□□□ -0.78
SSB-201ENST00000260956 H0Y9P7 68 aa10.2□□□□□ -0.78
SSB-201ENST00000260956 IGHV6-1A0A0B4J1U7 121 aa10.19□□□□□ -0.78
SSB-201ENST00000260956 MP68P56378 58 aa10.19□□□□□ -0.78
SSB-201ENST00000260956 DMBT1Q9UGM3 2413 aaPredicted RBP10.17□□□□□ -0.78
SSB-201ENST00000260956 LINC00208Q96KT6 92 aa10.16□□□□□ -0.78
SSB-201ENST00000260956 MRPL34Q9BQ48 92 aaKnown RBP10.14□□□□□ -0.79
SSB-201ENST00000260956 TP53AIP1Q9HCN2 124 aa10.14□□□□□ -0.79
SSB-201ENST00000260956 CYP4F30PQ9H0H9 118 aa10.13□□□□□ -0.79
SSB-201ENST00000260956 C1orf195Q5TG92 126 aa10.1□□□□□ -0.79
SSB-201ENST00000260956 SPINK6Q6UWN8 80 aa10.1□□□□□ -0.79
SSB-201ENST00000260956 FP248Q71RG6 208 aaPredicted RBP10.1□□□□□ -0.79
SSB-201ENST00000260956 KRTAP13-3Q3SY46 172 aa10.1□□□□□ -0.79
SSB-201ENST00000260956 C1orf64Q8NEQ6 169 aa10.1□□□□□ -0.79
SSB-201ENST00000260956 SMIM26A0A096LP01 95 aa10.07□□□□□ -0.8
SSB-201ENST00000260956 SPANXA2-OT1Q8N9U9 137 aa10.07□□□□□ -0.8
SSB-201ENST00000260956 C8orf87E5RJ46 101 aa10.07□□□□□ -0.8
SSB-201ENST00000260956 TNXBP22105 4242 aa10.06□□□□□ -0.8
SSB-201ENST00000260956 MT1HL1P0DM35 61 aa10.04□□□□□ -0.8
SSB-201ENST00000260956 C4orf26Q17RF5 130 aa10.01□□□□□ -0.81
SSB-201ENST00000260956 KRTAP16-1A8MUX0 517 aa10□□□□□ -0.81
SSB-201ENST00000260956 LIMD2Q9BT23 127 aa10□□□□□ -0.81
SSB-201ENST00000260956 Q5W150 140 aa9.99□□□□□ -0.81
SSB-201ENST00000260956 PRR4Q16378 134 aa9.99□□□□□ -0.81
SSB-201ENST00000260956 J3QL48 77 aa9.98□□□□□ -0.81
SSB-201ENST00000260956 NDUFS5O43920 106 aa9.98□□□□□ -0.81
SSB-201ENST00000260956 Q8N9P0 234 aaPredicted RBP9.98□□□□□ -0.81
SSB-201ENST00000260956 TYMSOSQ8TAI1 123 aa9.98□□□□□ -0.81
SSB-201ENST00000260956 IGLV7-46A0A075B6I9 117 aa9.95□□□□□ -0.82
SSB-201ENST00000260956 SPINK1P00995 79 aa9.95□□□□□ -0.82
SSB-201ENST00000260956 RPS29P62273 56 aaKnown RBP9.95□□□□□ -0.82
SSB-201ENST00000260956 PRR26Q8N8Z3 221 aa9.95□□□□□ -0.82
SSB-201ENST00000260956 KRTAP10-8P60410 259 aa9.94□□□□□ -0.82
SSB-201ENST00000260956 LINC00313P59037 77 aa9.93□□□□□ -0.82
SSB-201ENST00000260956 LOC101927531A0A1B0GV80 90 aa9.89□□□□□ -0.83
SSB-201ENST00000260956 LINC00304Q8N9R0 145 aa9.89□□□□□ -0.83
SSB-201ENST00000260956 PCOTHQ58A44 107 aa9.88□□□□□ -0.83
SSB-201ENST00000260956 HMCN2Q8NDA2 5059 aa9.87□□□□□ -0.83
SSB-201ENST00000260956 C4orf48Q5BLP8 95 aa9.86□□□□□ -0.83
SSB-201ENST00000260956 SPAG11AQ6PDA7 123 aa9.85□□□□□ -0.83
SSB-201ENST00000260956 Q1T7F1 81 aa9.82□□□□□ -0.84
SSB-201ENST00000260956 SVIPQ8NHG7 77 aa9.82□□□□□ -0.84
SSB-201ENST00000260956 MPLKIPQ8TAP9 179 aa9.79□□□□□ -0.84
SSB-201ENST00000260956 COA5Q86WW8 74 aa9.79□□□□□ -0.84
SSB-201ENST00000260956 IGKV2-30P06310 120 aa9.77□□□□□ -0.85
SSB-201ENST00000260956 HRES1P13985 223 aa9.72□□□□□ -0.85
SSB-201ENST00000260956 RETNLBQ9BQ08 111 aa9.7□□□□□ -0.86
SSB-201ENST00000260956 DMAC1Q96GE9 116 aa9.67□□□□□ -0.86
SSB-201ENST00000260956 LRP2P98164 4655 aa9.65□□□□□ -0.86
SSB-201ENST00000260956 UBR4Q5T4S7 5183 aa9.64□□□□□ -0.87
SSB-201ENST00000260956 V9GYY9 64 aa9.63□□□□□ -0.87
SSB-201ENST00000260956 A8MUU9 505 aa9.62□□□□□ -0.87
SSB-201ENST00000260956 C20orf166-AS1Q96NR2 134 aa9.62□□□□□ -0.87
SSB-201ENST00000260956 LPAP08519 4548 aa9.6□□□□□ -0.87
SSB-201ENST00000260956 A8MUN3 132 aa9.58□□□□□ -0.88
SSB-201ENST00000260956 Q5VV11 94 aa9.58□□□□□ -0.88
SSB-201ENST00000260956 PSPHP1O15172 72 aa9.57□□□□□ -0.88
SSB-201ENST00000260956 IGKV2D-30A0A075B6S6 120 aa9.56□□□□□ -0.88
SSB-201ENST00000260956 ACYP2P14621 99 aa9.54□□□□□ -0.88
SSB-201ENST00000260956 LINC01558Q9Y6Z2 57 aa9.53□□□□□ -0.88
SSB-201ENST00000260956 C9orf92A6NGG3 77 aa9.53□□□□□ -0.88
SSB-201ENST00000260956 PRO0628Q9UI54 55 aa9.53□□□□□ -0.88
SSB-201ENST00000260956 C7orf65Q6ZTY9 151 aa9.51□□□□□ -0.89
SSB-201ENST00000260956 PRR15LQ9BU68 103 aa9.48□□□□□ -0.89
SSB-201ENST00000260956 Q75L30 129 aa9.47□□□□□ -0.89
SSB-201ENST00000260956 BRK1Q8WUW1 75 aa9.47□□□□□ -0.89
SSB-201ENST00000260956 RNF213Q63HN8 5207 aa9.45□□□□□ -0.9
SSB-201ENST00000260956 CHKB-CPT1BH3BT56 60 aa9.35□□□□□ -0.91
SSB-201ENST00000260956 A8MU10 97 aa9.33□□□□□ -0.92
SSB-201ENST00000260956 KRTAP3-1Q9BYR8 98 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms