RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 C1orf195Q5TG92 126 aa9.57□□□□□ -0.88
HLA-F-216ENST00000259951 PRR15Q8IV56 129 aa9.57□□□□□ -0.88
HLA-F-216ENST00000259951 DMBT1Q9UGM3 2413 aaPredicted RBP9.54□□□□□ -0.88
HLA-F-216ENST00000259951 HERC1Q15751 4861 aa9.54□□□□□ -0.88
HLA-F-216ENST00000259951 A0A1B0GVX0 72 aa9.53□□□□□ -0.88
HLA-F-216ENST00000259951 HCG22E2RYF7 251 aa9.5□□□□□ -0.89
HLA-F-216ENST00000259951 IGHV6-1A0A0B4J1U7 121 aa9.49□□□□□ -0.89
HLA-F-216ENST00000259951 UQCRQO14949 82 aa9.49□□□□□ -0.89
HLA-F-216ENST00000259951 MT1HL1P0DM35 61 aa9.49□□□□□ -0.89
HLA-F-216ENST00000259951 CCDC179H3BU77 68 aa9.47□□□□□ -0.89
HLA-F-216ENST00000259951 COX7CP15954 63 aa9.47□□□□□ -0.89
HLA-F-216ENST00000259951 KRTAP29-1A8MX34 341 aaPredicted RBP9.46□□□□□ -0.89
HLA-F-216ENST00000259951 C8orf87E5RJ46 101 aa9.45□□□□□ -0.9
HLA-F-216ENST00000259951 C8orf17Q9NRJ1 99 aa9.45□□□□□ -0.9
HLA-F-216ENST00000259951 CASC2Q6XLA1 102 aa9.45□□□□□ -0.9
HLA-F-216ENST00000259951 SERP2Q8N6R1 65 aa9.45□□□□□ -0.9
HLA-F-216ENST00000259951 MMP24-AS1A0A0U1RRL7 71 aa9.44□□□□□ -0.9
HLA-F-216ENST00000259951 SMIM20Q8N5G0 67 aa9.44□□□□□ -0.9
HLA-F-216ENST00000259951 WFDC13Q8IUB5 93 aa9.43□□□□□ -0.9
HLA-F-216ENST00000259951 hDV103S1A0JD37 113 aa9.42□□□□□ -0.9
HLA-F-216ENST00000259951 LRP1Q07954 4544 aaKnown RBP9.41□□□□□ -0.9
HLA-F-216ENST00000259951 LINC00313P59037 77 aa9.4□□□□□ -0.9
HLA-F-216ENST00000259951 FAT3Q8TDW7 4589 aa9.38□□□□□ -0.91
HLA-F-216ENST00000259951 J3QL48 77 aa9.38□□□□□ -0.91
HLA-F-216ENST00000259951 TMEM254Q8TBM7 123 aa9.38□□□□□ -0.91
HLA-F-216ENST00000259951 FP248Q71RG6 208 aaPredicted RBP9.37□□□□□ -0.91
HLA-F-216ENST00000259951 RETNLBQ9BQ08 111 aa9.37□□□□□ -0.91
HLA-F-216ENST00000259951 TNXBP22105 4242 aa9.36□□□□□ -0.91
HLA-F-216ENST00000259951 TRAV7A0A075B6U4 112 aa9.36□□□□□ -0.91
HLA-F-216ENST00000259951 NOTCH2NLQ7Z3S9 236 aa9.36□□□□□ -0.91
HLA-F-216ENST00000259951 MRPL34Q9BQ48 92 aaKnown RBP9.34□□□□□ -0.91
HLA-F-216ENST00000259951 OCR1Q9BZK8 76 aa9.31□□□□□ -0.92
HLA-F-216ENST00000259951 TP53AIP1Q9HCN2 124 aa9.28□□□□□ -0.92
HLA-F-216ENST00000259951 NDUFS5O43920 106 aa9.27□□□□□ -0.92
HLA-F-216ENST00000259951 KRTAP16-1A8MUX0 517 aa9.26□□□□□ -0.93
HLA-F-216ENST00000259951 IGLV7-46A0A075B6I9 117 aa9.25□□□□□ -0.93
HLA-F-216ENST00000259951 Q8N9P0 234 aaPredicted RBP9.24□□□□□ -0.93
HLA-F-216ENST00000259951 C9orf92A6NGG3 77 aa9.23□□□□□ -0.93
HLA-F-216ENST00000259951 PRR4Q16378 134 aa9.21□□□□□ -0.93
HLA-F-216ENST00000259951 C5orf47Q569G3 176 aa9.21□□□□□ -0.93
HLA-F-216ENST00000259951 C20orf197Q8N268 126 aa9.2□□□□□ -0.94
HLA-F-216ENST00000259951 TMEM258P61165 79 aa9.2□□□□□ -0.94
HLA-F-216ENST00000259951 KLKP1Q107X0 134 aa9.19□□□□□ -0.94
HLA-F-216ENST00000259951 TRAV22A0A0B4J277 110 aa9.16□□□□□ -0.94
HLA-F-216ENST00000259951 MP68P56378 58 aa9.16□□□□□ -0.94
HLA-F-216ENST00000259951 HMCN2Q8NDA2 5059 aa9.16□□□□□ -0.94
HLA-F-216ENST00000259951 KRTAP13-3Q3SY46 172 aa9.15□□□□□ -0.94
HLA-F-216ENST00000259951 C20orf166-AS1Q96NR2 134 aa9.15□□□□□ -0.94
HLA-F-216ENST00000259951 H0Y9P7 68 aa9.14□□□□□ -0.95
HLA-F-216ENST00000259951 NDUFC1O43677 76 aa9.14□□□□□ -0.95
HLA-F-216ENST00000259951 A8MUU9 505 aa9.13□□□□□ -0.95
HLA-F-216ENST00000259951 CYSTM1Q9H1C7 97 aa9.13□□□□□ -0.95
HLA-F-216ENST00000259951 H3BPC8 53 aa9.13□□□□□ -0.95
HLA-F-216ENST00000259951 TPRXLQ17RH7 258 aa9.11□□□□□ -0.95
HLA-F-216ENST00000259951 Q75L30 129 aa9.09□□□□□ -0.95
HLA-F-216ENST00000259951 A0A0U1RQV1 116 aa9.09□□□□□ -0.95
HLA-F-216ENST00000259951 Q5W150 140 aa9.07□□□□□ -0.96
HLA-F-216ENST00000259951 LINC00208Q96KT6 92 aa9.07□□□□□ -0.96
HLA-F-216ENST00000259951 SNURFQ9Y675 71 aa9.07□□□□□ -0.96
HLA-F-216ENST00000259951 H7BZZ5 65 aa9.06□□□□□ -0.96
HLA-F-216ENST00000259951 ZCCHC13Q8WW36 166 aaKnown RBP9.06□□□□□ -0.96
HLA-F-216ENST00000259951 XP32Q5T750 250 aa9.05□□□□□ -0.96
HLA-F-216ENST00000259951 C1orf64Q8NEQ6 169 aa9.05□□□□□ -0.96
HLA-F-216ENST00000259951 FAM236DA0A1B0GTK5 79 aa9.03□□□□□ -0.96
HLA-F-216ENST00000259951 FAM236CP0DP71 79 aa9.03□□□□□ -0.96
HLA-F-216ENST00000259951 ATP5EP56381 51 aaPredicted RBP9.03□□□□□ -0.96
HLA-F-216ENST00000259951 UBR4Q5T4S7 5183 aa9.02□□□□□ -0.97
HLA-F-216ENST00000259951 LOC101927531A0A1B0GV80 90 aa9.02□□□□□ -0.97
HLA-F-216ENST00000259951 RPL37P61927 97 aaKnown RBP9.02□□□□□ -0.97
HLA-F-216ENST00000259951 RPS28P62857 69 aaKnown RBP9□□□□□ -0.97
HLA-F-216ENST00000259951 ATP11AUNQ6ZP68 121 aa8.99□□□□□ -0.97
HLA-F-216ENST00000259951 IGKV2-30P06310 120 aa8.94□□□□□ -0.98
HLA-F-216ENST00000259951 LRP2P98164 4655 aa8.92□□□□□ -0.98
HLA-F-216ENST00000259951 CYP4F30PQ9H0H9 118 aa8.92□□□□□ -0.98
HLA-F-216ENST00000259951 IGKV2D-30A0A075B6S6 120 aa8.91□□□□□ -0.98
HLA-F-216ENST00000259951 C7orf65Q6ZTY9 151 aa8.91□□□□□ -0.98
HLA-F-216ENST00000259951 SERP1Q9Y6X1 66 aa8.91□□□□□ -0.98
HLA-F-216ENST00000259951 PCOTHQ58A44 107 aa8.87□□□□□ -0.99
HLA-F-216ENST00000259951 SEC61BP60468 96 aaKnown RBP8.83□□□□□ -1
HLA-F-216ENST00000259951 SPINK7P58062 85 aa8.83□□□□□ -1
HLA-F-216ENST00000259951 SPANXA2-OT1Q8N9U9 137 aa8.83□□□□□ -1
HLA-F-216ENST00000259951 RNF213Q63HN8 5207 aa8.78□□□□□ -1
HLA-F-216ENST00000259951 HRES1P13985 223 aa8.77□□□□□ -1.01
HLA-F-216ENST00000259951 LPAP08519 4548 aa8.76□□□□□ -1.01
HLA-F-216ENST00000259951 SMIM26A0A096LP01 95 aa8.71□□□□□ -1.02
HLA-F-216ENST00000259951 C4orf26Q17RF5 130 aa8.66□□□□□ -1.02
HLA-F-216ENST00000259951 DMAC1Q96GE9 116 aa8.64□□□□□ -1.03
HLA-F-216ENST00000259951 A8MUN3 132 aa8.63□□□□□ -1.03
HLA-F-216ENST00000259951 ACYP2P14621 99 aa8.62□□□□□ -1.03
HLA-F-216ENST00000259951 COX6B2Q6YFQ2 88 aa8.6□□□□□ -1.03
HLA-F-216ENST00000259951 SVIPQ8NHG7 77 aa8.58□□□□□ -1.04
HLA-F-216ENST00000259951 RBM12B-AS1Q9P1G2 102 aa8.57□□□□□ -1.04
HLA-F-216ENST00000259951 MUC2Q02817 5179 aa8.55□□□□□ -1.04
HLA-F-216ENST00000259951 COA5Q86WW8 74 aa8.53□□□□□ -1.04
HLA-F-216ENST00000259951 MPLKIPQ8TAP9 179 aa8.53□□□□□ -1.04
HLA-F-216ENST00000259951 KRTAP4-1Q9BYQ7 146 aa8.51□□□□□ -1.05
HLA-F-216ENST00000259951 KRTAP3-1Q9BYR8 98 aa8.51□□□□□ -1.05
HLA-F-216ENST00000259951 MUC17Q685J3 4493 aa8.49□□□□□ -1.05
HLA-F-216ENST00000259951 CHKB-CPT1BH3BT56 60 aa8.47□□□□□ -1.05
HLA-F-216ENST00000259951 V9GYY9 64 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms