RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 NDUFC1O43677 76 aa5.06□□□□□ -1.6
CALCOCO2-201ENST00000258947 KLKP1Q107X0 134 aa5.06□□□□□ -1.6
CALCOCO2-201ENST00000258947 MRPL34Q9BQ48 92 aaKnown RBP5.06□□□□□ -1.6
CALCOCO2-201ENST00000258947 SPINK1P00995 79 aa5.05□□□□□ -1.6
CALCOCO2-201ENST00000258947 PCOTHQ58A44 107 aa5.05□□□□□ -1.6
CALCOCO2-201ENST00000258947 NOTCH2NLQ7Z3S9 236 aa5.05□□□□□ -1.6
CALCOCO2-201ENST00000258947 KMT2CQ8NEZ4 4911 aaKnown RBP5.05□□□□□ -1.6
CALCOCO2-201ENST00000258947 TRAV22A0A0B4J277 110 aa5.04□□□□□ -1.6
CALCOCO2-201ENST00000258947 C1orf64Q8NEQ6 169 aa5.04□□□□□ -1.6
CALCOCO2-201ENST00000258947 H7BZZ5 65 aa5.04□□□□□ -1.6
CALCOCO2-201ENST00000258947 Q5VSD8 79 aa5.04□□□□□ -1.6
CALCOCO2-201ENST00000258947 C1orf195Q5TG92 126 aa5.04□□□□□ -1.6
CALCOCO2-201ENST00000258947 PKHD1P08F94 4074 aa5.04□□□□□ -1.6
CALCOCO2-201ENST00000258947 KRTAP29-1A8MX34 341 aaPredicted RBP5.02□□□□□ -1.61
CALCOCO2-201ENST00000258947 A0A0U1RQV1 116 aa5.02□□□□□ -1.61
CALCOCO2-201ENST00000258947 DYNC1H1Q14204 4646 aaKnown RBP5.02□□□□□ -1.61
CALCOCO2-201ENST00000258947 FAT2Q9NYQ8 4349 aa5.02□□□□□ -1.61
CALCOCO2-201ENST00000258947 TP53AIP1Q9HCN2 124 aa5.02□□□□□ -1.61
CALCOCO2-201ENST00000258947 SPAG11AQ6PDA7 123 aa5.01□□□□□ -1.61
CALCOCO2-201ENST00000258947 FAT1Q14517 4588 aa5.01□□□□□ -1.61
CALCOCO2-201ENST00000258947 C9orf92A6NGG3 77 aa5□□□□□ -1.61
CALCOCO2-201ENST00000258947 C8orf87E5RJ46 101 aa5□□□□□ -1.61
CALCOCO2-201ENST00000258947 RYR2Q92736 4967 aa4.98□□□□□ -1.61
CALCOCO2-201ENST00000258947 VPS13BQ7Z7G8 4022 aa4.97□□□□□ -1.61
CALCOCO2-201ENST00000258947 PKD1P98161 4303 aa4.97□□□□□ -1.61
CALCOCO2-201ENST00000258947 IGKV2D-30A0A075B6S6 120 aa4.96□□□□□ -1.61
CALCOCO2-201ENST00000258947 IGKV2-30P06310 120 aa4.96□□□□□ -1.61
CALCOCO2-201ENST00000258947 ATP5EP56381 51 aaPredicted RBP4.95□□□□□ -1.62
CALCOCO2-201ENST00000258947 ASB16-AS1Q495Z4 193 aa4.94□□□□□ -1.62
CALCOCO2-201ENST00000258947 H3BPC8 53 aa4.94□□□□□ -1.62
CALCOCO2-201ENST00000258947 SERP1Q9Y6X1 66 aa4.94□□□□□ -1.62
CALCOCO2-201ENST00000258947 MPLKIPQ8TAP9 179 aa4.93□□□□□ -1.62
CALCOCO2-201ENST00000258947 Q5XG85 94 aa4.92□□□□□ -1.62
CALCOCO2-201ENST00000258947 Q5W150 140 aa4.91□□□□□ -1.62
CALCOCO2-201ENST00000258947 LOC101927531A0A1B0GV80 90 aa4.9□□□□□ -1.62
CALCOCO2-201ENST00000258947 ZCCHC13Q8WW36 166 aaKnown RBP4.89□□□□□ -1.63
CALCOCO2-201ENST00000258947 Q8N1X5 172 aa4.88□□□□□ -1.63
CALCOCO2-201ENST00000258947 KRTAP10-4P60372 401 aaPredicted RBP4.88□□□□□ -1.63
CALCOCO2-201ENST00000258947 RPS28P62857 69 aaKnown RBP4.88□□□□□ -1.63
CALCOCO2-201ENST00000258947 APOBP04114 4563 aaKnown RBP4.88□□□□□ -1.63
CALCOCO2-201ENST00000258947 RYR3Q15413 4870 aa4.87□□□□□ -1.63
CALCOCO2-201ENST00000258947 Q8N9P0 234 aaPredicted RBP4.87□□□□□ -1.63
CALCOCO2-201ENST00000258947 CHKB-CPT1BH3BT56 60 aa4.86□□□□□ -1.63
CALCOCO2-201ENST00000258947 KIAA1109Q2LD37 5005 aa4.86□□□□□ -1.63
CALCOCO2-201ENST00000258947 SMIM26A0A096LP01 95 aa4.86□□□□□ -1.63
CALCOCO2-201ENST00000258947 OXTP01178 125 aa4.86□□□□□ -1.63
CALCOCO2-201ENST00000258947 RPS29P62273 56 aaKnown RBP4.86□□□□□ -1.63
CALCOCO2-201ENST00000258947 IGLV7-46A0A075B6I9 117 aa4.84□□□□□ -1.63
CALCOCO2-201ENST00000258947 CYP4F30PQ9H0H9 118 aa4.84□□□□□ -1.64
CALCOCO2-201ENST00000258947 J3QL48 77 aa4.82□□□□□ -1.64
CALCOCO2-201ENST00000258947 SPANXA2-OT1Q8N9U9 137 aa4.82□□□□□ -1.64
CALCOCO2-201ENST00000258947 HRES1P13985 223 aa4.81□□□□□ -1.64
CALCOCO2-201ENST00000258947 COA5Q86WW8 74 aa4.81□□□□□ -1.64
CALCOCO2-201ENST00000258947 C7orf65Q6ZTY9 151 aa4.81□□□□□ -1.64
CALCOCO2-201ENST00000258947 ATP11AUNQ6ZP68 121 aa4.81□□□□□ -1.64
CALCOCO2-201ENST00000258947 KRTAP16-1A8MUX0 517 aa4.8□□□□□ -1.64
CALCOCO2-201ENST00000258947 C4orf26Q17RF5 130 aa4.8□□□□□ -1.64
CALCOCO2-201ENST00000258947 LRP1Q07954 4544 aaKnown RBP4.79□□□□□ -1.64
CALCOCO2-201ENST00000258947 PSPHP1O15172 72 aa4.79□□□□□ -1.64
CALCOCO2-201ENST00000258947 KRTAP10-8P60410 259 aa4.78□□□□□ -1.64
CALCOCO2-201ENST00000258947 ACYP2P14621 99 aa4.78□□□□□ -1.64
CALCOCO2-201ENST00000258947 RYR1P21817 5038 aa4.76□□□□□ -1.65
CALCOCO2-201ENST00000258947 FP248Q71RG6 208 aaPredicted RBP4.75□□□□□ -1.65
CALCOCO2-201ENST00000258947 EPPK1P58107 5090 aaKnown RBP4.74□□□□□ -1.65
CALCOCO2-201ENST00000258947 SPINK7P58062 85 aa4.74□□□□□ -1.65
CALCOCO2-201ENST00000258947 PRR15LQ9BU68 103 aa4.74□□□□□ -1.65
CALCOCO2-201ENST00000258947 HSPG2P98160 4391 aa4.73□□□□□ -1.65
CALCOCO2-201ENST00000258947 KRTAP17-1Q9BYP8 105 aa4.73□□□□□ -1.65
CALCOCO2-201ENST00000258947 KRTAP13-3Q3SY46 172 aa4.73□□□□□ -1.65
CALCOCO2-201ENST00000258947 MYCBP2O75592 4640 aa4.73□□□□□ -1.65
CALCOCO2-201ENST00000258947 KRTAP4-5Q9BYR2 181 aa4.73□□□□□ -1.65
CALCOCO2-201ENST00000258947 BRK1Q8WUW1 75 aa4.71□□□□□ -1.65
CALCOCO2-201ENST00000258947 A8MUU9 505 aa4.71□□□□□ -1.66
CALCOCO2-201ENST00000258947 C20orf166-AS1Q96NR2 134 aa4.71□□□□□ -1.66
CALCOCO2-201ENST00000258947 V9GYY9 64 aa4.71□□□□□ -1.66
CALCOCO2-201ENST00000258947 A8MUN3 132 aa4.7□□□□□ -1.66
CALCOCO2-201ENST00000258947 MT1HL1P0DM35 61 aa4.68□□□□□ -1.66
CALCOCO2-201ENST00000258947 Q75L30 129 aa4.68□□□□□ -1.66
CALCOCO2-201ENST00000258947 DMAC1Q96GE9 116 aa4.67□□□□□ -1.66
CALCOCO2-201ENST00000258947 XP32Q5T750 250 aa4.66□□□□□ -1.66
CALCOCO2-201ENST00000258947 A6NED7 52 aa4.66□□□□□ -1.66
CALCOCO2-201ENST00000258947 RPL37P61927 97 aaKnown RBP4.64□□□□□ -1.67
CALCOCO2-201ENST00000258947 SEC61GP60059 68 aa4.63□□□□□ -1.67
CALCOCO2-201ENST00000258947 Q1T7F1 81 aa4.63□□□□□ -1.67
CALCOCO2-201ENST00000258947 FAT3Q8TDW7 4589 aa4.63□□□□□ -1.67
CALCOCO2-201ENST00000258947 A0A1B0GU69 56 aa4.62□□□□□ -1.67
CALCOCO2-201ENST00000258947 SPTSSBQ8NFR3 76 aa4.61□□□□□ -1.67
CALCOCO2-201ENST00000258947 PKHD1L1Q86WI1 4243 aa4.61□□□□□ -1.67
CALCOCO2-201ENST00000258947 COX6B2Q6YFQ2 88 aa4.57□□□□□ -1.68
CALCOCO2-201ENST00000258947 TPRXLQ17RH7 258 aa4.57□□□□□ -1.68
CALCOCO2-201ENST00000258947 Q5VV11 94 aa4.56□□□□□ -1.68
CALCOCO2-201ENST00000258947 LINC01558Q9Y6Z2 57 aa4.56□□□□□ -1.68
CALCOCO2-201ENST00000258947 HERC2O95714 4834 aa4.55□□□□□ -1.68
CALCOCO2-201ENST00000258947 TNXBP22105 4242 aa4.55□□□□□ -1.68
CALCOCO2-201ENST00000258947 RBM12B-AS1Q9P1G2 102 aa4.54□□□□□ -1.68
CALCOCO2-201ENST00000258947 SEC61BP60468 96 aaKnown RBP4.53□□□□□ -1.68
CALCOCO2-201ENST00000258947 ABCA13Q86UQ4 5058 aa4.52□□□□□ -1.69
CALCOCO2-201ENST00000258947 PRO0628Q9UI54 55 aa4.5□□□□□ -1.69
CALCOCO2-201ENST00000258947 BIRC6Q9NR09 4857 aa4.49□□□□□ -1.69
CALCOCO2-201ENST00000258947 KRTAP3-1Q9BYR8 98 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms