RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 KRTAP4-1Q9BYQ7 146 aa4.62□□□□□ -1.67
TMEM258-201ENST00000257262 SS18L2Q9UHA2 77 aa4.62□□□□□ -1.67
TMEM258-201ENST00000257262 A0A0U1RQV1 116 aa4.61□□□□□ -1.67
TMEM258-201ENST00000257262 ATXN8Q156A1 80 aa4.61□□□□□ -1.67
TMEM258-201ENST00000257262 TRBV7-4A0A0J9YYF1 115 aa4.6□□□□□ -1.67
TMEM258-201ENST00000257262 RBM3P98179 157 aaKnown RBP4.6□□□□□ -1.67
TMEM258-201ENST00000257262 Q75L30 129 aa4.6□□□□□ -1.67
TMEM258-201ENST00000257262 PCP4L1A6NKN8 68 aa4.59□□□□□ -1.67
TMEM258-201ENST00000257262 CCKP06307 115 aa4.59□□□□□ -1.67
TMEM258-201ENST00000257262 PCOTHQ58A44 107 aa4.59□□□□□ -1.67
TMEM258-201ENST00000257262 Q96NJ1 140 aa4.59□□□□□ -1.67
TMEM258-201ENST00000257262 FSIP2Q5CZC0 6907 aa4.58□□□□□ -1.68
TMEM258-201ENST00000257262 TAX1BP3O14907 124 aa4.57□□□□□ -1.68
TMEM258-201ENST00000257262 RPL37P61927 97 aaKnown RBP4.57□□□□□ -1.68
TMEM258-201ENST00000257262 LYRM7Q5U5X0 104 aa4.57□□□□□ -1.68
TMEM258-201ENST00000257262 OBSCN-AS1Q96MR7 158 aa4.57□□□□□ -1.68
TMEM258-201ENST00000257262 DSCR8Q96T75 97 aa4.57□□□□□ -1.68
TMEM258-201ENST00000257262 VPS25Q9BRG1 176 aa4.57□□□□□ -1.68
TMEM258-201ENST00000257262 TRBV20-1A0A075B6N2 111 aa4.56□□□□□ -1.68
TMEM258-201ENST00000257262 C9JAW5 83 aa4.56□□□□□ -1.68
TMEM258-201ENST00000257262 JMJD7-PLA2G4BH0Y9G9 81 aa4.55□□□□□ -1.68
TMEM258-201ENST00000257262 DEFB116Q30KQ4 102 aa4.55□□□□□ -1.68
TMEM258-201ENST00000257262 A0A1W2PPM0 123 aa4.54□□□□□ -1.68
TMEM258-201ENST00000257262 IGKV4-1P06312 121 aa4.54□□□□□ -1.68
TMEM258-201ENST00000257262 LINC00472Q9H8W2 130 aa4.54□□□□□ -1.68
TMEM258-201ENST00000257262 DSCR10P59022 87 aa4.53□□□□□ -1.68
TMEM258-201ENST00000257262 SIGMAR1Q99720 223 aa4.53□□□□□ -1.68
TMEM258-201ENST00000257262 Q6ZQT0 140 aa4.52□□□□□ -1.69
TMEM258-201ENST00000257262 LOC110117498A0A087WWA1 95 aa4.51□□□□□ -1.69
TMEM258-201ENST00000257262 LINC00313P59037 77 aa4.51□□□□□ -1.69
TMEM258-201ENST00000257262 C14orf132Q9NPU4 83 aa4.51□□□□□ -1.69
TMEM258-201ENST00000257262 CRCT1Q9UGL9 99 aa4.51□□□□□ -1.69
TMEM258-201ENST00000257262 ATP11AUNQ6ZP68 121 aa4.5□□□□□ -1.69
TMEM258-201ENST00000257262 MTURNQ8N3F0 131 aa4.5□□□□□ -1.69
TMEM258-201ENST00000257262 A8MUU9 505 aa4.49□□□□□ -1.69
TMEM258-201ENST00000257262 H3BT86 120 aa4.49□□□□□ -1.69
TMEM258-201ENST00000257262 PDE6GP18545 87 aa4.49□□□□□ -1.69
TMEM258-201ENST00000257262 NOTCH2NLQ7Z3S9 236 aa4.49□□□□□ -1.69
TMEM258-201ENST00000257262 C20orf166-AS1Q96NR2 134 aa4.49□□□□□ -1.69
TMEM258-201ENST00000257262 IGHV6-1A0A0B4J1U7 121 aa4.48□□□□□ -1.69
TMEM258-201ENST00000257262 A0A1B0GW54 56 aa4.48□□□□□ -1.69
TMEM258-201ENST00000257262 COL5A1-AS1Q5SY13 56 aa4.48□□□□□ -1.69
TMEM258-201ENST00000257262 SPCS1Q9Y6A9 102 aa4.48□□□□□ -1.69
TMEM258-201ENST00000257262 KRTAP16-1A8MUX0 517 aa4.47□□□□□ -1.69
TMEM258-201ENST00000257262 SEC61GP60059 68 aa4.47□□□□□ -1.69
TMEM258-201ENST00000257262 KRTAP19-2Q3LHN2 52 aa4.47□□□□□ -1.69
TMEM258-201ENST00000257262 A0A1B0GVX0 72 aa4.46□□□□□ -1.7
TMEM258-201ENST00000257262 J3KT08 172 aa4.46□□□□□ -1.7
TMEM258-201ENST00000257262 C8orf87E5RJ46 101 aa4.44□□□□□ -1.7
TMEM258-201ENST00000257262 NREPQ16612 68 aa4.44□□□□□ -1.7
TMEM258-201ENST00000257262 KRTAP9-8Q9BYQ0 159 aa4.44□□□□□ -1.7
TMEM258-201ENST00000257262 NDUFB1O75438 58 aa4.43□□□□□ -1.7
TMEM258-201ENST00000257262 K7EP34 96 aa4.42□□□□□ -1.7
TMEM258-201ENST00000257262 IGKV3D-7A0A0C4DH55 119 aa4.41□□□□□ -1.7
TMEM258-201ENST00000257262 A8MWP4 228 aa4.41□□□□□ -1.7
TMEM258-201ENST00000257262 MT1HP80294 61 aa4.41□□□□□ -1.7
TMEM258-201ENST00000257262 PRO0461Q9UI25 63 aa4.41□□□□□ -1.7
TMEM258-201ENST00000257262 COX6B2Q6YFQ2 88 aa4.4□□□□□ -1.71
TMEM258-201ENST00000257262 MPLKIPQ8TAP9 179 aa4.4□□□□□ -1.71
TMEM258-201ENST00000257262 C8orf17Q9NRJ1 99 aa4.39□□□□□ -1.71
TMEM258-201ENST00000257262 GTF2H5Q6ZYL4 71 aa4.38□□□□□ -1.71
TMEM258-201ENST00000257262 PRR15Q8IV56 129 aa4.38□□□□□ -1.71
TMEM258-201ENST00000257262 Q8N9P0 234 aaPredicted RBP4.37□□□□□ -1.71
TMEM258-201ENST00000257262 F8W1H4 67 aa4.36□□□□□ -1.71
TMEM258-201ENST00000257262 K7EQZ3 153 aa4.36□□□□□ -1.71
TMEM258-201ENST00000257262 BPY2O14599 106 aa4.36□□□□□ -1.71
TMEM258-201ENST00000257262 Q6ZVQ6 151 aa4.36□□□□□ -1.71
TMEM258-201ENST00000257262 MMP24-AS1A0A0U1RRL7 71 aa4.35□□□□□ -1.71
TMEM258-201ENST00000257262 ZCCHC13Q8WW36 166 aaKnown RBP4.35□□□□□ -1.71
TMEM258-201ENST00000257262 LINC00846Q9NV44 126 aa4.34□□□□□ -1.71
TMEM258-201ENST00000257262 M0R2T5 61 aa4.33□□□□□ -1.72
TMEM258-201ENST00000257262 TMEM254Q8TBM7 123 aa4.33□□□□□ -1.72
TMEM258-201ENST00000257262 MRPL34Q9BQ48 92 aaKnown RBP4.33□□□□□ -1.72
TMEM258-201ENST00000257262 hDV103S1A0JD37 113 aa4.32□□□□□ -1.72
TMEM258-201ENST00000257262 HRES1P13985 223 aa4.32□□□□□ -1.72
TMEM258-201ENST00000257262 ETDBQ3ZM63 59 aa4.32□□□□□ -1.72
TMEM258-201ENST00000257262 Q8N9L7 120 aa4.32□□□□□ -1.72
TMEM258-201ENST00000257262 UBL5Q9BZL1 73 aa4.32□□□□□ -1.72
TMEM258-201ENST00000257262 SPINK7P58062 85 aa4.3□□□□□ -1.72
TMEM258-201ENST00000257262 KRTAP10-6P60371 365 aaPredicted RBP4.3□□□□□ -1.72
TMEM258-201ENST00000257262 RBM12B-AS1Q9P1G2 102 aa4.3□□□□□ -1.72
TMEM258-201ENST00000257262 NDUFS5O43920 106 aa4.29□□□□□ -1.72
TMEM258-201ENST00000257262 FAM236DA0A1B0GTK5 79 aa4.28□□□□□ -1.72
TMEM258-201ENST00000257262 FAM236CP0DP71 79 aa4.28□□□□□ -1.72
TMEM258-201ENST00000257262 CASC2Q6XLA1 102 aa4.28□□□□□ -1.72
TMEM258-201ENST00000257262 WFDC13Q8IUB5 93 aa4.28□□□□□ -1.72
TMEM258-201ENST00000257262 HCG22E2RYF7 251 aa4.25□□□□□ -1.73
TMEM258-201ENST00000257262 Q5W150 140 aa4.25□□□□□ -1.73
TMEM258-201ENST00000257262 FLGP20930 4061 aaPredicted RBP4.25□□□□□ -1.73
TMEM258-201ENST00000257262 A0A1B0GV90 55 aa4.23□□□□□ -1.73
TMEM258-201ENST00000257262 CXCL6P80162 114 aa4.23□□□□□ -1.73
TMEM258-201ENST00000257262 ACYP1P07311 99 aa4.21□□□□□ -1.74
TMEM258-201ENST00000257262 IGKV2D-30A0A075B6S6 120 aa4.2□□□□□ -1.74
TMEM258-201ENST00000257262 IGKV2-30P06310 120 aa4.2□□□□□ -1.74
TMEM258-201ENST00000257262 C7orf65Q6ZTY9 151 aa4.18□□□□□ -1.74
TMEM258-201ENST00000257262 FAM240AA0A1B0GVK7 77 aa4.17□□□□□ -1.74
TMEM258-201ENST00000257262 TP53AIP1Q9HCN2 124 aa4.15□□□□□ -1.75
TMEM258-201ENST00000257262 MT2AP02795 61 aa4.14□□□□□ -1.75
TMEM258-201ENST00000257262 H1FX-AS1Q4G0G2 97 aa4.14□□□□□ -1.75
TMEM258-201ENST00000257262 HIST1H4AP62805 103 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms