RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 SPATA8Q6RVD6 105 aa12.25□□□□□ -0.45
RARA-201ENST00000254066 DNAH9Q9NYC9 4486 aa12.24□□□□□ -0.45
RARA-201ENST00000254066 LINC00483Q53H64 154 aa12.22□□□□□ -0.45
RARA-201ENST00000254066 TENM2Q9NT68 2774 aa12.22□□□□□ -0.45
RARA-201ENST00000254066 KRTAP13-3Q3SY46 172 aa12.22□□□□□ -0.45
RARA-201ENST00000254066 IGLV9-49A0A0B4J1Y8 123 aa12.2□□□□□ -0.46
RARA-201ENST00000254066 CHTF8P0CG12 524 aa12.2□□□□□ -0.46
RARA-201ENST00000254066 DMAC1Q96GE9 116 aa12.19□□□□□ -0.46
RARA-201ENST00000254066 C1orf134Q5TEV5 83 aa12.17□□□□□ -0.46
RARA-201ENST00000254066 COL7A1Q02388 2944 aa12.17□□□□□ -0.46
RARA-201ENST00000254066 A0A1B0GU69 56 aa12.17□□□□□ -0.46
RARA-201ENST00000254066 CSAG1Q6PB30 78 aa12.16□□□□□ -0.46
RARA-201ENST00000254066 Q5W150 140 aa12.13□□□□□ -0.47
RARA-201ENST00000254066 NOTCH2NLQ7Z3S9 236 aa12.12□□□□□ -0.47
RARA-201ENST00000254066 KRTAP1-5Q9BYS1 174 aa12.11□□□□□ -0.47
RARA-201ENST00000254066 UQCR11O14957 56 aa12.09□□□□□ -0.47
RARA-201ENST00000254066 ROMO1P60602 79 aa12.08□□□□□ -0.48
RARA-201ENST00000254066 MIR22HGQ0VDD5 57 aa12.08□□□□□ -0.48
RARA-201ENST00000254066 TENM3Q9P273 2699 aa12.05□□□□□ -0.48
RARA-201ENST00000254066 ALMS1Q8TCU4 4167 aa12.05□□□□□ -0.48
RARA-201ENST00000254066 HUWE1Q7Z6Z7 4374 aaKnown RBP12.04□□□□□ -0.48
RARA-201ENST00000254066 STAB2Q8WWQ8 2551 aa12□□□□□ -0.49
RARA-201ENST00000254066 SRRM2Q9UQ35 2752 aaKnown RBP11.97□□□□□ -0.49
RARA-201ENST00000254066 FAM229AH3BQW9 127 aa11.96□□□□□ -0.49
RARA-201ENST00000254066 KMT2CQ8NEZ4 4911 aaKnown RBP11.94□□□□□ -0.5
RARA-201ENST00000254066 PANO1I0J062 215 aa11.94□□□□□ -0.5
RARA-201ENST00000254066 SPACA4Q8TDM5 124 aa11.93□□□□□ -0.5
RARA-201ENST00000254066 DNAH7Q8WXX0 4024 aa11.91□□□□□ -0.5
RARA-201ENST00000254066 IGKV2-30P06310 120 aa11.91□□□□□ -0.5
RARA-201ENST00000254066 UBE2DNLQ8IWF7 75 aa11.9□□□□□ -0.5
RARA-201ENST00000254066 SPINK6Q6UWN8 80 aa11.88□□□□□ -0.51
RARA-201ENST00000254066 ZNF861PO60384 105 aa11.85□□□□□ -0.51
RARA-201ENST00000254066 IGLV5-52A0A0A0MRZ9 124 aa11.85□□□□□ -0.51
RARA-201ENST00000254066 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.84□□□□□ -0.51
RARA-201ENST00000254066 DYNC2H1Q8NCM8 4307 aaKnown RBP11.83□□□□□ -0.52
RARA-201ENST00000254066 PSORS1C2Q9UIG4 136 aa11.81□□□□□ -0.52
RARA-201ENST00000254066 APLNQ9ULZ1 77 aa11.81□□□□□ -0.52
RARA-201ENST00000254066 RYR3Q15413 4870 aa11.8□□□□□ -0.52
RARA-201ENST00000254066 NUPR2A6NF83 97 aa11.79□□□□□ -0.52
RARA-201ENST00000254066 IGLV7-43P04211 117 aa11.78□□□□□ -0.52
RARA-201ENST00000254066 ANAPC11Q9NYG5 84 aa11.78□□□□□ -0.52
RARA-201ENST00000254066 Q6ZRN7 208 aaPredicted RBP11.76□□□□□ -0.53
RARA-201ENST00000254066 DNAH10Q8IVF4 4471 aa11.76□□□□□ -0.53
RARA-201ENST00000254066 SSBP3-AS1Q7Z2R9 100 aa11.75□□□□□ -0.53
RARA-201ENST00000254066 STARD9Q9P2P6 4700 aa11.74□□□□□ -0.53
RARA-201ENST00000254066 KRTAP25-1Q3LHN0 102 aa11.74□□□□□ -0.53
RARA-201ENST00000254066 NBDYA0A0U1RRE5 68 aa11.73□□□□□ -0.53
RARA-201ENST00000254066 CSMD3Q7Z407 3707 aa11.73□□□□□ -0.53
RARA-201ENST00000254066 SACSQ9NZJ4 4579 aa11.72□□□□□ -0.53
RARA-201ENST00000254066 CIRBP-AS1Q8TBR5 109 aa11.7□□□□□ -0.54
RARA-201ENST00000254066 RYR2Q92736 4967 aa11.69□□□□□ -0.54
RARA-201ENST00000254066 LYSTQ99698 3801 aa11.68□□□□□ -0.54
RARA-201ENST00000254066 IGKV2D-30A0A075B6S6 120 aa11.68□□□□□ -0.54
RARA-201ENST00000254066 P0C880 135 aa11.68□□□□□ -0.54
RARA-201ENST00000254066 KRTAP16-1A8MUX0 517 aa11.62□□□□□ -0.55
RARA-201ENST00000254066 LY6G6CO95867 125 aa11.62□□□□□ -0.55
RARA-201ENST00000254066 PLECQ15149 4684 aaKnown RBP11.59□□□□□ -0.55
RARA-201ENST00000254066 A0A087WTM6 91 aa11.57□□□□□ -0.56
RARA-201ENST00000254066 A8MUU9 505 aa11.57□□□□□ -0.56
RARA-201ENST00000254066 HYDINQ4G0P3 5121 aa11.49□□□□□ -0.57
RARA-201ENST00000254066 Q6ZSA8 131 aa11.45□□□□□ -0.58
RARA-201ENST00000254066 H0YAA0 97 aa11.44□□□□□ -0.58
RARA-201ENST00000254066 LINC00304Q8N9R0 145 aa11.44□□□□□ -0.58
RARA-201ENST00000254066 DNAH8Q96JB1 4490 aa11.43□□□□□ -0.58
RARA-201ENST00000254066 BIRC6Q9NR09 4857 aa11.4□□□□□ -0.59
RARA-201ENST00000254066 SPINK1P00995 79 aa11.39□□□□□ -0.59
RARA-201ENST00000254066 EPPK1P58107 5090 aaKnown RBP11.39□□□□□ -0.59
RARA-201ENST00000254066 VPS13DQ5THJ4 4388 aa11.36□□□□□ -0.59
RARA-201ENST00000254066 C20orf166-AS1Q96NR2 134 aa11.36□□□□□ -0.59
RARA-201ENST00000254066 DNAH6Q9C0G6 4158 aa11.35□□□□□ -0.59
RARA-201ENST00000254066 KMT2AQ03164 3969 aa11.35□□□□□ -0.59
RARA-201ENST00000254066 KRTAP13-2Q52LG2 175 aa11.34□□□□□ -0.59
RARA-201ENST00000254066 A0A1B0GU33 70 aa11.33□□□□□ -0.6
RARA-201ENST00000254066 Q8N1X5 172 aa11.3□□□□□ -0.6
RARA-201ENST00000254066 H1FX-AS1Q4G0G2 97 aa11.27□□□□□ -0.6
RARA-201ENST00000254066 NDUFAF8A1L188 74 aa11.27□□□□□ -0.61
RARA-201ENST00000254066 FRAS1Q86XX4 4008 aa11.26□□□□□ -0.61
RARA-201ENST00000254066 K7ERS5 55 aa11.23□□□□□ -0.61
RARA-201ENST00000254066 TYMSOSQ8TAI1 123 aa11.23□□□□□ -0.61
RARA-201ENST00000254066 A0A1B0GVY2 172 aa11.18□□□□□ -0.62
RARA-201ENST00000254066 HECTD4Q9Y4D8 3996 aa11.18□□□□□ -0.62
RARA-201ENST00000254066 DNAH17Q9UFH2 4485 aa11.13□□□□□ -0.63
RARA-201ENST00000254066 SPINT4Q6UDR6 99 aa11.11□□□□□ -0.63
RARA-201ENST00000254066 LUZP6Q538Z0 58 aa11.1□□□□□ -0.63
RARA-201ENST00000254066 SEC61BP60468 96 aaKnown RBP11.1□□□□□ -0.63
RARA-201ENST00000254066 KRTAP1-4P0C5Y4 121 aa11.09□□□□□ -0.63
RARA-201ENST00000254066 FAT2Q9NYQ8 4349 aa11.09□□□□□ -0.63
RARA-201ENST00000254066 DNAH2Q9P225 4427 aa11.09□□□□□ -0.63
RARA-201ENST00000254066 KRTAP15-1Q3LI76 137 aa11.04□□□□□ -0.64
RARA-201ENST00000254066 KRTAP3-1Q9BYR8 98 aa11.03□□□□□ -0.64
RARA-201ENST00000254066 RPS29P62273 56 aaKnown RBP11.02□□□□□ -0.65
RARA-201ENST00000254066 HERC2O95714 4834 aa11□□□□□ -0.65
RARA-201ENST00000254066 DNAH11Q96DT5 4516 aa10.99□□□□□ -0.65
RARA-201ENST00000254066 COX6B2Q6YFQ2 88 aa10.98□□□□□ -0.65
RARA-201ENST00000254066 PKD1P98161 4303 aa10.98□□□□□ -0.65
RARA-201ENST00000254066 DYNC1H1Q14204 4646 aaKnown RBP10.97□□□□□ -0.65
RARA-201ENST00000254066 CRIPTQ9P021 101 aa10.95□□□□□ -0.66
RARA-201ENST00000254066 PKHD1P08F94 4074 aa10.94□□□□□ -0.66
RARA-201ENST00000254066 KIAA1109Q2LD37 5005 aa10.91□□□□□ -0.66
RARA-201ENST00000254066 RPL37P61927 97 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms