RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 TRBV7-7A0A0K0K1E9 115 aa11.15□□□□□ -0.62
NEDD8-201ENST00000250495 M0R2T5 61 aa11.15□□□□□ -0.62
NEDD8-201ENST00000250495 LORP23490 312 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-201ENST00000250495 LINC00643Q86TS7 51 aa11.15□□□□□ -0.62
NEDD8-201ENST00000250495 KRTAP10-6P60371 365 aaPredicted RBP11.14□□□□□ -0.63
NEDD8-201ENST00000250495 Q6Q795 121 aa11.14□□□□□ -0.63
NEDD8-201ENST00000250495 IGFL1Q6UW32 110 aa11.14□□□□□ -0.63
NEDD8-201ENST00000250495 FSIP2Q5CZC0 6907 aa11.12□□□□□ -0.63
NEDD8-201ENST00000250495 PCP4P48539 62 aa11.12□□□□□ -0.63
NEDD8-201ENST00000250495 NDUFV3P56181 108 aaKnown RBP11.12□□□□□ -0.63
NEDD8-201ENST00000250495 Q6ZQT0 140 aa11.12□□□□□ -0.63
NEDD8-201ENST00000250495 DSCR8Q96T75 97 aa11.12□□□□□ -0.63
NEDD8-201ENST00000250495 TRBV7-4A0A0J9YYF1 115 aa11.09□□□□□ -0.63
NEDD8-201ENST00000250495 IMUPQ9GZP8 106 aa11.08□□□□□ -0.64
NEDD8-201ENST00000250495 A0A1B0GV72 72 aa11.07□□□□□ -0.64
NEDD8-201ENST00000250495 ATP11AUNQ6ZP68 121 aa11.07□□□□□ -0.64
NEDD8-201ENST00000250495 LINC00846Q9NV44 126 aa11.06□□□□□ -0.64
NEDD8-201ENST00000250495 Q75L30 129 aa11.04□□□□□ -0.64
NEDD8-201ENST00000250495 ATP5EP2Q5VTU8 51 aa11.03□□□□□ -0.64
NEDD8-201ENST00000250495 FLGP20930 4061 aaPredicted RBP11.01□□□□□ -0.65
NEDD8-201ENST00000250495 UBL5Q9BZL1 73 aa11□□□□□ -0.65
NEDD8-201ENST00000250495 A0A1B0GW54 56 aa10.98□□□□□ -0.65
NEDD8-201ENST00000250495 SS18L2Q9UHA2 77 aa10.98□□□□□ -0.65
NEDD8-201ENST00000250495 Q96NJ1 140 aa10.96□□□□□ -0.65
NEDD8-201ENST00000250495 Q6ZVQ6 151 aa10.89□□□□□ -0.67
NEDD8-201ENST00000250495 C20orf166-AS1Q96NR2 134 aa10.88□□□□□ -0.67
NEDD8-201ENST00000250495 IGKV3D-7A0A0C4DH55 119 aa10.86□□□□□ -0.67
NEDD8-201ENST00000250495 A8MUU9 505 aa10.86□□□□□ -0.67
NEDD8-201ENST00000250495 CXCL6P80162 114 aa10.86□□□□□ -0.67
NEDD8-201ENST00000250495 A0A087WSZ3 146 aa10.85□□□□□ -0.67
NEDD8-201ENST00000250495 A0A1W2PNM2 257 aa10.83□□□□□ -0.68
NEDD8-201ENST00000250495 FAM236AA0A1B0GUQ0 79 aa10.82□□□□□ -0.68
NEDD8-201ENST00000250495 FAM236BA0A1B0GV22 79 aa10.82□□□□□ -0.68
NEDD8-201ENST00000250495 HIST1H4AP62805 103 aaKnown RBP10.82□□□□□ -0.68
NEDD8-201ENST00000250495 ANAPC13Q9BS18 74 aa10.82□□□□□ -0.68
NEDD8-201ENST00000250495 NREPQ16612 68 aa10.78□□□□□ -0.68
NEDD8-201ENST00000250495 ATOX1O00244 68 aa10.76□□□□□ -0.69
NEDD8-201ENST00000250495 DSCR10P59022 87 aa10.76□□□□□ -0.69
NEDD8-201ENST00000250495 LINC00313P59037 77 aa10.72□□□□□ -0.69
NEDD8-201ENST00000250495 A0A087WVE0 104 aa10.71□□□□□ -0.69
NEDD8-201ENST00000250495 BPY2O14599 106 aa10.69□□□□□ -0.7
NEDD8-201ENST00000250495 IGKV4-1P06312 121 aa10.69□□□□□ -0.7
NEDD8-201ENST00000250495 KRTAP9-8Q9BYQ0 159 aa10.68□□□□□ -0.7
NEDD8-201ENST00000250495 KRTAP16-1A8MUX0 517 aa10.63□□□□□ -0.71
NEDD8-201ENST00000250495 FAM236DA0A1B0GTK5 79 aa10.62□□□□□ -0.71
NEDD8-201ENST00000250495 FAM236CP0DP71 79 aa10.62□□□□□ -0.71
NEDD8-201ENST00000250495 UQCRQO14949 82 aa10.6□□□□□ -0.71
NEDD8-201ENST00000250495 SMIM20Q8N5G0 67 aa10.6□□□□□ -0.71
NEDD8-201ENST00000250495 LINC00472Q9H8W2 130 aa10.6□□□□□ -0.71
NEDD8-201ENST00000250495 COX7CP15954 63 aa10.59□□□□□ -0.71
NEDD8-201ENST00000250495 DEFB116Q30KQ4 102 aa10.59□□□□□ -0.71
NEDD8-201ENST00000250495 SERP2Q8N6R1 65 aa10.59□□□□□ -0.71
NEDD8-201ENST00000250495 NOTCH2NLQ7Z3S9 236 aa10.58□□□□□ -0.72
NEDD8-201ENST00000250495 RBM12B-AS1Q9P1G2 102 aa10.58□□□□□ -0.72
NEDD8-201ENST00000250495 CCDC179H3BU77 68 aa10.56□□□□□ -0.72
NEDD8-201ENST00000250495 IGHV6-1A0A0B4J1U7 121 aa10.55□□□□□ -0.72
NEDD8-201ENST00000250495 MPLKIPQ8TAP9 179 aa10.53□□□□□ -0.72
NEDD8-201ENST00000250495 HRES1P13985 223 aa10.52□□□□□ -0.73
NEDD8-201ENST00000250495 Q8N9L7 120 aa10.52□□□□□ -0.73
NEDD8-201ENST00000250495 TRAV7A0A075B6U4 112 aa10.51□□□□□ -0.73
NEDD8-201ENST00000250495 J3KT08 172 aa10.51□□□□□ -0.73
NEDD8-201ENST00000250495 C8orf87E5RJ46 101 aa10.49□□□□□ -0.73
NEDD8-201ENST00000250495 MT2AP02795 61 aa10.49□□□□□ -0.73
NEDD8-201ENST00000250495 USH2AO75445 5202 aa10.48□□□□□ -0.73
NEDD8-201ENST00000250495 K7EQZ3 153 aa10.47□□□□□ -0.73
NEDD8-201ENST00000250495 A0A1B0GVX0 72 aa10.46□□□□□ -0.73
NEDD8-201ENST00000250495 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.45□□□□□ -0.74
NEDD8-201ENST00000250495 A8MWP4 228 aa10.43□□□□□ -0.74
NEDD8-201ENST00000250495 SSPOA2VEC9 5147 aa10.43□□□□□ -0.74
NEDD8-201ENST00000250495 HCG22E2RYF7 251 aa10.41□□□□□ -0.74
NEDD8-201ENST00000250495 PRR15Q8IV56 129 aa10.41□□□□□ -0.74
NEDD8-201ENST00000250495 KRTAP9-7A8MTY7 169 aa10.4□□□□□ -0.74
NEDD8-201ENST00000250495 MT1FP04733 61 aa10.4□□□□□ -0.74
NEDD8-201ENST00000250495 KRTAP10-10P60014 251 aa10.39□□□□□ -0.75
NEDD8-201ENST00000250495 OCR1Q9BZK8 76 aa10.39□□□□□ -0.75
NEDD8-201ENST00000250495 ZCCHC13Q8WW36 166 aaKnown RBP10.38□□□□□ -0.75
NEDD8-201ENST00000250495 NDUFB1O75438 58 aa10.37□□□□□ -0.75
NEDD8-201ENST00000250495 KRTAP9-3Q9BYQ3 159 aa10.35□□□□□ -0.75
NEDD8-201ENST00000250495 LCE2BO14633 110 aa10.34□□□□□ -0.75
NEDD8-201ENST00000250495 SPINK7P58062 85 aa10.34□□□□□ -0.75
NEDD8-201ENST00000250495 KLKP1Q107X0 134 aa10.32□□□□□ -0.76
NEDD8-201ENST00000250495 C20orf197Q8N268 126 aa10.31□□□□□ -0.76
NEDD8-201ENST00000250495 Q8N9P0 234 aaPredicted RBP10.3□□□□□ -0.76
NEDD8-201ENST00000250495 CASC2Q6XLA1 102 aa10.29□□□□□ -0.76
NEDD8-201ENST00000250495 MMP24-AS1A0A0U1RRL7 71 aa10.27□□□□□ -0.77
NEDD8-201ENST00000250495 KRTAP19-1Q8IUB9 90 aa10.27□□□□□ -0.77
NEDD8-201ENST00000250495 TMEM258P61165 79 aa10.26□□□□□ -0.77
NEDD8-201ENST00000250495 WFDC13Q8IUB5 93 aa10.26□□□□□ -0.77
NEDD8-201ENST00000250495 NDUFC1O43677 76 aa10.25□□□□□ -0.77
NEDD8-201ENST00000250495 TMEM254Q8TBM7 123 aa10.25□□□□□ -0.77
NEDD8-201ENST00000250495 C8orf17Q9NRJ1 99 aa10.24□□□□□ -0.77
NEDD8-201ENST00000250495 FCGBPQ9Y6R7 5405 aaPredicted RBP10.23□□□□□ -0.77
NEDD8-201ENST00000250495 CYSTM1Q9H1C7 97 aa10.23□□□□□ -0.77
NEDD8-201ENST00000250495 hDV103S1A0JD37 113 aa10.21□□□□□ -0.77
NEDD8-201ENST00000250495 C5orf47Q569G3 176 aa10.21□□□□□ -0.77
NEDD8-201ENST00000250495 H7BZZ5 65 aa10.17□□□□□ -0.78
NEDD8-201ENST00000250495 SNURFQ9Y675 71 aa10.16□□□□□ -0.78
NEDD8-201ENST00000250495 TP53AIP1Q9HCN2 124 aa10.15□□□□□ -0.78
NEDD8-201ENST00000250495 H3BPC8 53 aa10.14□□□□□ -0.79
NEDD8-201ENST00000250495 MP68P56378 58 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms