RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 A0A1B0GVX0 72 aa10.26□□□□□ -0.77
LRFN3-201ENST00000246529 FAT2Q9NYQ8 4349 aa10.25□□□□□ -0.77
LRFN3-201ENST00000246529 ASB16-AS1Q495Z4 193 aa10.25□□□□□ -0.77
LRFN3-201ENST00000246529 SPINK6Q6UWN8 80 aa10.24□□□□□ -0.77
LRFN3-201ENST00000246529 KRTAP10-1P60331 282 aa10.24□□□□□ -0.77
LRFN3-201ENST00000246529 CDK2AP2O75956 126 aa10.23□□□□□ -0.77
LRFN3-201ENST00000246529 CYP4F30PQ9H0H9 118 aa10.22□□□□□ -0.77
LRFN3-201ENST00000246529 NDUFS5O43920 106 aa10.21□□□□□ -0.77
LRFN3-201ENST00000246529 H3BPC8 53 aa10.21□□□□□ -0.78
LRFN3-201ENST00000246529 C1orf195Q5TG92 126 aa10.19□□□□□ -0.78
LRFN3-201ENST00000246529 Q6ZSA8 131 aa10.16□□□□□ -0.78
LRFN3-201ENST00000246529 MRPL34Q9BQ48 92 aaKnown RBP10.15□□□□□ -0.78
LRFN3-201ENST00000246529 PCOTHQ58A44 107 aa10.15□□□□□ -0.78
LRFN3-201ENST00000246529 TP53AIP1Q9HCN2 124 aa10.14□□□□□ -0.79
LRFN3-201ENST00000246529 KRTAP13-2Q52LG2 175 aa10.12□□□□□ -0.79
LRFN3-201ENST00000246529 SSBP3-AS1Q7Z2R9 100 aa10.12□□□□□ -0.79
LRFN3-201ENST00000246529 SPANXA2-OT1Q8N9U9 137 aa10.12□□□□□ -0.79
LRFN3-201ENST00000246529 CD164Q04900 197 aa10.09□□□□□ -0.79
LRFN3-201ENST00000246529 VPS13BQ7Z7G8 4022 aa10.08□□□□□ -0.8
LRFN3-201ENST00000246529 KRTAP21-3Q3LHN1 58 aa10.05□□□□□ -0.8
LRFN3-201ENST00000246529 Q5W150 140 aa10.04□□□□□ -0.8
LRFN3-201ENST00000246529 PKHD1P08F94 4074 aa10.04□□□□□ -0.8
LRFN3-201ENST00000246529 Q1T7F1 81 aa10.04□□□□□ -0.8
LRFN3-201ENST00000246529 IGLV7-46A0A075B6I9 117 aa10.03□□□□□ -0.8
LRFN3-201ENST00000246529 KRTAP1-4P0C5Y4 121 aa10.02□□□□□ -0.8
LRFN3-201ENST00000246529 SACSQ9NZJ4 4579 aa10.02□□□□□ -0.81
LRFN3-201ENST00000246529 PSPHP1O15172 72 aa10.01□□□□□ -0.81
LRFN3-201ENST00000246529 COA5Q86WW8 74 aa9.98□□□□□ -0.81
LRFN3-201ENST00000246529 KRTAP13-3Q3SY46 172 aa9.96□□□□□ -0.81
LRFN3-201ENST00000246529 LINC00313P59037 77 aa9.95□□□□□ -0.82
LRFN3-201ENST00000246529 Q8N9P0 234 aaPredicted RBP9.95□□□□□ -0.82
LRFN3-201ENST00000246529 C8orf87E5RJ46 101 aa9.95□□□□□ -0.82
LRFN3-201ENST00000246529 RETNLBQ9BQ08 111 aa9.94□□□□□ -0.82
LRFN3-201ENST00000246529 PLA2G1BP04054 148 aaKnown RBP9.93□□□□□ -0.82
LRFN3-201ENST00000246529 A8MUN3 132 aa9.93□□□□□ -0.82
LRFN3-201ENST00000246529 PMAIP1Q13794 54 aa9.92□□□□□ -0.82
LRFN3-201ENST00000246529 LOC101927531A0A1B0GV80 90 aa9.9□□□□□ -0.82
LRFN3-201ENST00000246529 DYNC1H1Q14204 4646 aaKnown RBP9.89□□□□□ -0.83
LRFN3-201ENST00000246529 H3BS24 57 aa9.89□□□□□ -0.83
LRFN3-201ENST00000246529 TYMSOSQ8TAI1 123 aa9.88□□□□□ -0.83
LRFN3-201ENST00000246529 HRES1P13985 223 aa9.87□□□□□ -0.83
LRFN3-201ENST00000246529 SMR3BP02814 79 aaPredicted RBP9.86□□□□□ -0.83
LRFN3-201ENST00000246529 LIMD2Q9BT23 127 aa9.85□□□□□ -0.83
LRFN3-201ENST00000246529 KRTAP16-1A8MUX0 517 aa9.85□□□□□ -0.83
LRFN3-201ENST00000246529 Q5VV11 94 aa9.84□□□□□ -0.83
LRFN3-201ENST00000246529 PRR26Q8N8Z3 221 aa9.83□□□□□ -0.84
LRFN3-201ENST00000246529 PRR15LQ9BU68 103 aa9.82□□□□□ -0.84
LRFN3-201ENST00000246529 FAT1Q14517 4588 aa9.81□□□□□ -0.84
LRFN3-201ENST00000246529 FAM229AH3BQW9 127 aa9.8□□□□□ -0.84
LRFN3-201ENST00000246529 SPAG11AQ6PDA7 123 aa9.79□□□□□ -0.84
LRFN3-201ENST00000246529 SPINK1P00995 79 aa9.77□□□□□ -0.85
LRFN3-201ENST00000246529 A8MU10 97 aa9.76□□□□□ -0.85
LRFN3-201ENST00000246529 APOBP04114 4563 aaKnown RBP9.75□□□□□ -0.85
LRFN3-201ENST00000246529 CHKB-CPT1BH3BT56 60 aa9.75□□□□□ -0.85
LRFN3-201ENST00000246529 IGKV2-30P06310 120 aa9.74□□□□□ -0.85
LRFN3-201ENST00000246529 LINC00304Q8N9R0 145 aa9.73□□□□□ -0.85
LRFN3-201ENST00000246529 A0A1B0GVY2 172 aa9.72□□□□□ -0.85
LRFN3-201ENST00000246529 RYR2Q92736 4967 aa9.71□□□□□ -0.86
LRFN3-201ENST00000246529 IGKV2D-30A0A075B6S6 120 aa9.7□□□□□ -0.86
LRFN3-201ENST00000246529 KMT2CQ8NEZ4 4911 aaKnown RBP9.68□□□□□ -0.86
LRFN3-201ENST00000246529 LINC01558Q9Y6Z2 57 aa9.67□□□□□ -0.86
LRFN3-201ENST00000246529 ACYP2P14621 99 aa9.67□□□□□ -0.86
LRFN3-201ENST00000246529 DMAC1Q96GE9 116 aa9.66□□□□□ -0.86
LRFN3-201ENST00000246529 Q75L30 129 aa9.66□□□□□ -0.86
LRFN3-201ENST00000246529 KRTAP10-4P60372 401 aaPredicted RBP9.65□□□□□ -0.86
LRFN3-201ENST00000246529 A6NED7 52 aa9.61□□□□□ -0.87
LRFN3-201ENST00000246529 PKHD1L1Q86WI1 4243 aa9.6□□□□□ -0.87
LRFN3-201ENST00000246529 KTN1-AS1Q86SY8 53 aa9.6□□□□□ -0.87
LRFN3-201ENST00000246529 RPS29P62273 56 aaKnown RBP9.59□□□□□ -0.87
LRFN3-201ENST00000246529 LCA10Q71F78 164 aa9.58□□□□□ -0.88
LRFN3-201ENST00000246529 C9orf92A6NGG3 77 aa9.58□□□□□ -0.88
LRFN3-201ENST00000246529 ATP11AUNQ6ZP68 121 aa9.58□□□□□ -0.88
LRFN3-201ENST00000246529 SPTSSBQ8NFR3 76 aa9.56□□□□□ -0.88
LRFN3-201ENST00000246529 SPINK7P58062 85 aa9.54□□□□□ -0.88
LRFN3-201ENST00000246529 C7orf65Q6ZTY9 151 aa9.52□□□□□ -0.88
LRFN3-201ENST00000246529 A6NN06 94 aa9.49□□□□□ -0.89
LRFN3-201ENST00000246529 RBM12B-AS1Q9P1G2 102 aa9.49□□□□□ -0.89
LRFN3-201ENST00000246529 CDC42SE1Q9NRR8 79 aa9.49□□□□□ -0.89
LRFN3-201ENST00000246529 Q8N1X5 172 aa9.47□□□□□ -0.89
LRFN3-201ENST00000246529 LRP1Q07954 4544 aaKnown RBP9.44□□□□□ -0.9
LRFN3-201ENST00000246529 A8MUU9 505 aa9.42□□□□□ -0.9
LRFN3-201ENST00000246529 C20orf166-AS1Q96NR2 134 aa9.42□□□□□ -0.9
LRFN3-201ENST00000246529 A0A1B0GU69 56 aa9.39□□□□□ -0.91
LRFN3-201ENST00000246529 RYR3Q15413 4870 aa9.39□□□□□ -0.91
LRFN3-201ENST00000246529 A0A0A0MQY5 61 aa9.37□□□□□ -0.91
LRFN3-201ENST00000246529 HSPG2P98160 4391 aa9.37□□□□□ -0.91
LRFN3-201ENST00000246529 FLG2Q5D862 2391 aaPredicted RBP9.36□□□□□ -0.91
LRFN3-201ENST00000246529 FAT3Q8TDW7 4589 aa9.34□□□□□ -0.91
LRFN3-201ENST00000246529 TNXBP22105 4242 aa9.34□□□□□ -0.91
LRFN3-201ENST00000246529 Q5VSD8 79 aa9.3□□□□□ -0.92
LRFN3-201ENST00000246529 KRTAP3-1Q9BYR8 98 aa9.28□□□□□ -0.92
LRFN3-201ENST00000246529 KRTAP17-1Q9BYP8 105 aa9.27□□□□□ -0.93
LRFN3-201ENST00000246529 KRTAP10-8P60410 259 aa9.25□□□□□ -0.93
LRFN3-201ENST00000246529 RYR1P21817 5038 aa9.25□□□□□ -0.93
LRFN3-201ENST00000246529 MYCBP2O75592 4640 aa9.19□□□□□ -0.94
LRFN3-201ENST00000246529 KIAA1109Q2LD37 5005 aa9.18□□□□□ -0.94
LRFN3-201ENST00000246529 UQCR11O14957 56 aa9.17□□□□□ -0.94
LRFN3-201ENST00000246529 SPATA8Q6RVD6 105 aa9.17□□□□□ -0.94
LRFN3-201ENST00000246529 MIR22HGQ0VDD5 57 aa9.16□□□□□ -0.94
LRFN3-201ENST00000246529 DMBT1Q9UGM3 2413 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms