RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 IGHV6-1A0A0B4J1U7 121 aa10.72□□□□□ -0.69
TNFSF9-201ENST00000245817 A0A1B0GVX0 72 aa10.72□□□□□ -0.69
TNFSF9-201ENST00000245817 WFDC13Q8IUB5 93 aa10.69□□□□□ -0.7
TNFSF9-201ENST00000245817 SMIM20Q8N5G0 67 aa10.69□□□□□ -0.7
TNFSF9-201ENST00000245817 MYCBP2O75592 4640 aa10.68□□□□□ -0.7
TNFSF9-201ENST00000245817 LRP1Q07954 4544 aaKnown RBP10.68□□□□□ -0.7
TNFSF9-201ENST00000245817 CASC2Q6XLA1 102 aa10.68□□□□□ -0.7
TNFSF9-201ENST00000245817 FAT3Q8TDW7 4589 aa10.68□□□□□ -0.7
TNFSF9-201ENST00000245817 KRTAP10-8P60410 259 aa10.67□□□□□ -0.7
TNFSF9-201ENST00000245817 C8orf17Q9NRJ1 99 aa10.66□□□□□ -0.7
TNFSF9-201ENST00000245817 hDV103S1A0JD37 113 aa10.64□□□□□ -0.71
TNFSF9-201ENST00000245817 SERP2Q8N6R1 65 aa10.64□□□□□ -0.71
TNFSF9-201ENST00000245817 MMP24-AS1A0A0U1RRL7 71 aa10.63□□□□□ -0.71
TNFSF9-201ENST00000245817 PCLOQ9Y6V0 5065 aa10.63□□□□□ -0.71
TNFSF9-201ENST00000245817 TRAV7A0A075B6U4 112 aa10.62□□□□□ -0.71
TNFSF9-201ENST00000245817 C8orf87E5RJ46 101 aa10.62□□□□□ -0.71
TNFSF9-201ENST00000245817 OXTP01178 125 aa10.62□□□□□ -0.71
TNFSF9-201ENST00000245817 KRTAP29-1A8MX34 341 aaPredicted RBP10.61□□□□□ -0.71
TNFSF9-201ENST00000245817 COX7CP15954 63 aa10.6□□□□□ -0.71
TNFSF9-201ENST00000245817 LINC00313P59037 77 aa10.58□□□□□ -0.72
TNFSF9-201ENST00000245817 UQCRQO14949 82 aa10.57□□□□□ -0.72
TNFSF9-201ENST00000245817 TNXBP22105 4242 aa10.57□□□□□ -0.72
TNFSF9-201ENST00000245817 OCR1Q9BZK8 76 aa10.56□□□□□ -0.72
TNFSF9-201ENST00000245817 NOTCH2NLQ7Z3S9 236 aa10.55□□□□□ -0.72
TNFSF9-201ENST00000245817 TMEM254Q8TBM7 123 aa10.55□□□□□ -0.72
TNFSF9-201ENST00000245817 MRPL34Q9BQ48 92 aaKnown RBP10.54□□□□□ -0.72
TNFSF9-201ENST00000245817 CCDC179H3BU77 68 aa10.52□□□□□ -0.73
TNFSF9-201ENST00000245817 J3QL48 77 aa10.52□□□□□ -0.73
TNFSF9-201ENST00000245817 NDUFS5O43920 106 aa10.52□□□□□ -0.73
TNFSF9-201ENST00000245817 RETNLBQ9BQ08 111 aa10.5□□□□□ -0.73
TNFSF9-201ENST00000245817 MT1HL1P0DM35 61 aa10.5□□□□□ -0.73
TNFSF9-201ENST00000245817 TP53AIP1Q9HCN2 124 aa10.47□□□□□ -0.73
TNFSF9-201ENST00000245817 C5orf47Q569G3 176 aa10.45□□□□□ -0.74
TNFSF9-201ENST00000245817 C20orf197Q8N268 126 aa10.44□□□□□ -0.74
TNFSF9-201ENST00000245817 DMBT1Q9UGM3 2413 aaPredicted RBP10.43□□□□□ -0.74
TNFSF9-201ENST00000245817 MP68P56378 58 aa10.41□□□□□ -0.74
TNFSF9-201ENST00000245817 FP248Q71RG6 208 aaPredicted RBP10.41□□□□□ -0.74
TNFSF9-201ENST00000245817 KRTAP16-1A8MUX0 517 aa10.38□□□□□ -0.75
TNFSF9-201ENST00000245817 TRAV22A0A0B4J277 110 aa10.37□□□□□ -0.75
TNFSF9-201ENST00000245817 C9orf92A6NGG3 77 aa10.37□□□□□ -0.75
TNFSF9-201ENST00000245817 Q8N9P0 234 aaPredicted RBP10.37□□□□□ -0.75
TNFSF9-201ENST00000245817 H0Y9P7 68 aa10.36□□□□□ -0.75
TNFSF9-201ENST00000245817 SNURFQ9Y675 71 aa10.36□□□□□ -0.75
TNFSF9-201ENST00000245817 KLKP1Q107X0 134 aa10.34□□□□□ -0.75
TNFSF9-201ENST00000245817 IGLV7-46A0A075B6I9 117 aa10.32□□□□□ -0.76
TNFSF9-201ENST00000245817 A0A0U1RQV1 116 aa10.32□□□□□ -0.76
TNFSF9-201ENST00000245817 H3BPC8 53 aa10.32□□□□□ -0.76
TNFSF9-201ENST00000245817 LINC00208Q96KT6 92 aa10.31□□□□□ -0.76
TNFSF9-201ENST00000245817 PRR4Q16378 134 aa10.28□□□□□ -0.76
TNFSF9-201ENST00000245817 HERC1Q15751 4861 aa10.28□□□□□ -0.76
TNFSF9-201ENST00000245817 NDUFC1O43677 76 aa10.28□□□□□ -0.76
TNFSF9-201ENST00000245817 C1orf64Q8NEQ6 169 aa10.27□□□□□ -0.77
TNFSF9-201ENST00000245817 CYSTM1Q9H1C7 97 aa10.25□□□□□ -0.77
TNFSF9-201ENST00000245817 Q5W150 140 aa10.23□□□□□ -0.77
TNFSF9-201ENST00000245817 C20orf166-AS1Q96NR2 134 aa10.22□□□□□ -0.77
TNFSF9-201ENST00000245817 ZCCHC13Q8WW36 166 aaKnown RBP10.22□□□□□ -0.77
TNFSF9-201ENST00000245817 A8MUU9 505 aa10.21□□□□□ -0.78
TNFSF9-201ENST00000245817 H7BZZ5 65 aa10.19□□□□□ -0.78
TNFSF9-201ENST00000245817 LOC101927531A0A1B0GV80 90 aa10.18□□□□□ -0.78
TNFSF9-201ENST00000245817 KRTAP13-3Q3SY46 172 aa10.18□□□□□ -0.78
TNFSF9-201ENST00000245817 TMEM258P61165 79 aa10.17□□□□□ -0.78
TNFSF9-201ENST00000245817 Q75L30 129 aa10.16□□□□□ -0.78
TNFSF9-201ENST00000245817 TPRXLQ17RH7 258 aa10.1□□□□□ -0.79
TNFSF9-201ENST00000245817 XP32Q5T750 250 aa10.09□□□□□ -0.79
TNFSF9-201ENST00000245817 PCOTHQ58A44 107 aa10.09□□□□□ -0.79
TNFSF9-201ENST00000245817 ATP11AUNQ6ZP68 121 aa10.09□□□□□ -0.79
TNFSF9-201ENST00000245817 CYP4F30PQ9H0H9 118 aa10.09□□□□□ -0.79
TNFSF9-201ENST00000245817 IGKV2-30P06310 120 aa10.08□□□□□ -0.8
TNFSF9-201ENST00000245817 FAM236DA0A1B0GTK5 79 aa10.07□□□□□ -0.8
TNFSF9-201ENST00000245817 FAM236CP0DP71 79 aa10.07□□□□□ -0.8
TNFSF9-201ENST00000245817 IGKV2D-30A0A075B6S6 120 aa10.06□□□□□ -0.8
TNFSF9-201ENST00000245817 RPL37P61927 97 aaKnown RBP10.06□□□□□ -0.8
TNFSF9-201ENST00000245817 ATP5EP56381 51 aaPredicted RBP10.04□□□□□ -0.8
TNFSF9-201ENST00000245817 HMCN2Q8NDA2 5059 aa10.03□□□□□ -0.8
TNFSF9-201ENST00000245817 C7orf65Q6ZTY9 151 aa10.02□□□□□ -0.81
TNFSF9-201ENST00000245817 SPANXA2-OT1Q8N9U9 137 aa10□□□□□ -0.81
TNFSF9-201ENST00000245817 LPAP08519 4548 aa9.95□□□□□ -0.82
TNFSF9-201ENST00000245817 HRES1P13985 223 aa9.92□□□□□ -0.82
TNFSF9-201ENST00000245817 SPINK7P58062 85 aa9.92□□□□□ -0.82
TNFSF9-201ENST00000245817 KRTAP3-3Q9BYR6 98 aa9.87□□□□□ -0.83
TNFSF9-201ENST00000245817 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
TNFSF9-201ENST00000245817 LRP2P98164 4655 aa9.86□□□□□ -0.83
TNFSF9-201ENST00000245817 SERP1Q9Y6X1 66 aa9.86□□□□□ -0.83
TNFSF9-201ENST00000245817 SEC61BP60468 96 aaKnown RBP9.81□□□□□ -0.84
TNFSF9-201ENST00000245817 RPS28P62857 69 aaKnown RBP9.81□□□□□ -0.84
TNFSF9-201ENST00000245817 ACYP2P14621 99 aa9.77□□□□□ -0.84
TNFSF9-201ENST00000245817 C4orf26Q17RF5 130 aa9.77□□□□□ -0.84
TNFSF9-201ENST00000245817 DMAC1Q96GE9 116 aa9.76□□□□□ -0.85
TNFSF9-201ENST00000245817 A8MUN3 132 aa9.71□□□□□ -0.86
TNFSF9-201ENST00000245817 COA5Q86WW8 74 aa9.71□□□□□ -0.86
TNFSF9-201ENST00000245817 UBR4Q5T4S7 5183 aa9.7□□□□□ -0.86
TNFSF9-201ENST00000245817 COX6B2Q6YFQ2 88 aa9.66□□□□□ -0.86
TNFSF9-201ENST00000245817 CHKB-CPT1BH3BT56 60 aa9.65□□□□□ -0.86
TNFSF9-201ENST00000245817 MUC17Q685J3 4493 aa9.63□□□□□ -0.87
TNFSF9-201ENST00000245817 SMIM26A0A096LP01 95 aa9.6□□□□□ -0.87
TNFSF9-201ENST00000245817 RBM12B-AS1Q9P1G2 102 aa9.58□□□□□ -0.88
TNFSF9-201ENST00000245817 KRTAP3-1Q9BYR8 98 aa9.58□□□□□ -0.88
TNFSF9-201ENST00000245817 RNF213Q63HN8 5207 aa9.5□□□□□ -0.89
TNFSF9-201ENST00000245817 MPLKIPQ8TAP9 179 aa9.5□□□□□ -0.89
TNFSF9-201ENST00000245817 MUC2Q02817 5179 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms