RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 KIAA1109Q2LD37 5005 aa10.42□□□□□ -0.74
KLHDC3-201ENST00000244670 Q5VSD8 79 aa10.41□□□□□ -0.74
KLHDC3-201ENST00000244670 CASC2Q6XLA1 102 aa10.41□□□□□ -0.74
KLHDC3-201ENST00000244670 KRTAP29-1A8MX34 341 aaPredicted RBP10.39□□□□□ -0.75
KLHDC3-201ENST00000244670 NDUFB1O75438 58 aa10.39□□□□□ -0.75
KLHDC3-201ENST00000244670 C5orf47Q569G3 176 aa10.39□□□□□ -0.75
KLHDC3-201ENST00000244670 KRTAP17-1Q9BYP8 105 aa10.37□□□□□ -0.75
KLHDC3-201ENST00000244670 ATP5EP56381 51 aaPredicted RBP10.36□□□□□ -0.75
KLHDC3-201ENST00000244670 OXTP01178 125 aa10.35□□□□□ -0.75
KLHDC3-201ENST00000244670 MMP24-AS1A0A0U1RRL7 71 aa10.35□□□□□ -0.75
KLHDC3-201ENST00000244670 C4orf48Q5BLP8 95 aa10.34□□□□□ -0.75
KLHDC3-201ENST00000244670 SERP1Q9Y6X1 66 aa10.34□□□□□ -0.75
KLHDC3-201ENST00000244670 LINC00304Q8N9R0 145 aa10.31□□□□□ -0.76
KLHDC3-201ENST00000244670 ZCCHC13Q8WW36 166 aaKnown RBP10.31□□□□□ -0.76
KLHDC3-201ENST00000244670 A0A1B0GVX0 72 aa10.3□□□□□ -0.76
KLHDC3-201ENST00000244670 MP68P56378 58 aa10.3□□□□□ -0.76
KLHDC3-201ENST00000244670 hDV103S1A0JD37 113 aa10.29□□□□□ -0.76
KLHDC3-201ENST00000244670 ASB16-AS1Q495Z4 193 aa10.29□□□□□ -0.76
KLHDC3-201ENST00000244670 LRP1Q07954 4544 aaKnown RBP10.29□□□□□ -0.76
KLHDC3-201ENST00000244670 IGHV6-1A0A0B4J1U7 121 aa10.29□□□□□ -0.76
KLHDC3-201ENST00000244670 LIMD2Q9BT23 127 aa10.28□□□□□ -0.76
KLHDC3-201ENST00000244670 C8orf17Q9NRJ1 99 aa10.28□□□□□ -0.76
KLHDC3-201ENST00000244670 Q5XG85 94 aa10.27□□□□□ -0.76
KLHDC3-201ENST00000244670 SPINK1P00995 79 aa10.27□□□□□ -0.77
KLHDC3-201ENST00000244670 C1orf195Q5TG92 126 aa10.26□□□□□ -0.77
KLHDC3-201ENST00000244670 NOTCH2NLQ7Z3S9 236 aa10.25□□□□□ -0.77
KLHDC3-201ENST00000244670 H0Y9P7 68 aa10.24□□□□□ -0.77
KLHDC3-201ENST00000244670 Q8N1X5 172 aa10.23□□□□□ -0.77
KLHDC3-201ENST00000244670 LINC00208Q96KT6 92 aa10.23□□□□□ -0.77
KLHDC3-201ENST00000244670 FLG2Q5D862 2391 aaPredicted RBP10.22□□□□□ -0.77
KLHDC3-201ENST00000244670 SPAG11AQ6PDA7 123 aa10.21□□□□□ -0.77
KLHDC3-201ENST00000244670 TNXBP22105 4242 aa10.21□□□□□ -0.78
KLHDC3-201ENST00000244670 FAT3Q8TDW7 4589 aa10.2□□□□□ -0.78
KLHDC3-201ENST00000244670 H3BPC8 53 aa10.2□□□□□ -0.78
KLHDC3-201ENST00000244670 TRAV22A0A0B4J277 110 aa10.18□□□□□ -0.78
KLHDC3-201ENST00000244670 TP53AIP1Q9HCN2 124 aa10.17□□□□□ -0.78
KLHDC3-201ENST00000244670 RPS29P62273 56 aaKnown RBP10.17□□□□□ -0.78
KLHDC3-201ENST00000244670 NDUFS5O43920 106 aa10.15□□□□□ -0.79
KLHDC3-201ENST00000244670 C1orf64Q8NEQ6 169 aa10.15□□□□□ -0.79
KLHDC3-201ENST00000244670 MRPL34Q9BQ48 92 aaKnown RBP10.15□□□□□ -0.79
KLHDC3-201ENST00000244670 MYCBP2O75592 4640 aa10.14□□□□□ -0.79
KLHDC3-201ENST00000244670 SMIM26A0A096LP01 95 aa10.13□□□□□ -0.79
KLHDC3-201ENST00000244670 KRTAP10-8P60410 259 aa10.11□□□□□ -0.79
KLHDC3-201ENST00000244670 C8orf87E5RJ46 101 aa10.09□□□□□ -0.79
KLHDC3-201ENST00000244670 PRR4Q16378 134 aa10.09□□□□□ -0.79
KLHDC3-201ENST00000244670 LINC00313P59037 77 aa10.07□□□□□ -0.8
KLHDC3-201ENST00000244670 C4orf26Q17RF5 130 aa10.07□□□□□ -0.8
KLHDC3-201ENST00000244670 RETNLBQ9BQ08 111 aa10.07□□□□□ -0.8
KLHDC3-201ENST00000244670 CYP4F30PQ9H0H9 118 aa10.07□□□□□ -0.8
KLHDC3-201ENST00000244670 KRTAP4-5Q9BYR2 181 aa10.07□□□□□ -0.8
KLHDC3-201ENST00000244670 FP248Q71RG6 208 aaPredicted RBP10.05□□□□□ -0.8
KLHDC3-201ENST00000244670 SPANXA2-OT1Q8N9U9 137 aa10.04□□□□□ -0.8
KLHDC3-201ENST00000244670 BIRC6Q9NR09 4857 aa10.03□□□□□ -0.8
KLHDC3-201ENST00000244670 DMBT1Q9UGM3 2413 aaPredicted RBP10.02□□□□□ -0.81
KLHDC3-201ENST00000244670 KRTAP16-1A8MUX0 517 aa10□□□□□ -0.81
KLHDC3-201ENST00000244670 MT1HL1P0DM35 61 aa9.99□□□□□ -0.81
KLHDC3-201ENST00000244670 PCOTHQ58A44 107 aa9.97□□□□□ -0.81
KLHDC3-201ENST00000244670 Q5W150 140 aa9.97□□□□□ -0.81
KLHDC3-201ENST00000244670 Q8N9P0 234 aaPredicted RBP9.97□□□□□ -0.81
KLHDC3-201ENST00000244670 KRTAP13-3Q3SY46 172 aa9.96□□□□□ -0.81
KLHDC3-201ENST00000244670 ABCA13Q86UQ4 5058 aa9.96□□□□□ -0.82
KLHDC3-201ENST00000244670 MPLKIPQ8TAP9 179 aa9.95□□□□□ -0.82
KLHDC3-201ENST00000244670 C9orf92A6NGG3 77 aa9.94□□□□□ -0.82
KLHDC3-201ENST00000244670 IGLV7-46A0A075B6I9 117 aa9.93□□□□□ -0.82
KLHDC3-201ENST00000244670 HERC2O95714 4834 aa9.93□□□□□ -0.82
KLHDC3-201ENST00000244670 LOC101927531A0A1B0GV80 90 aa9.9□□□□□ -0.82
KLHDC3-201ENST00000244670 SVIPQ8NHG7 77 aa9.85□□□□□ -0.83
KLHDC3-201ENST00000244670 Q1T7F1 81 aa9.82□□□□□ -0.84
KLHDC3-201ENST00000244670 COA5Q86WW8 74 aa9.8□□□□□ -0.84
KLHDC3-201ENST00000244670 V9GYY9 64 aa9.74□□□□□ -0.85
KLHDC3-201ENST00000244670 IGKV2-30P06310 120 aa9.74□□□□□ -0.85
KLHDC3-201ENST00000244670 C20orf166-AS1Q96NR2 134 aa9.74□□□□□ -0.85
KLHDC3-201ENST00000244670 A8MUU9 505 aa9.73□□□□□ -0.85
KLHDC3-201ENST00000244670 J3QL48 77 aa9.7□□□□□ -0.86
KLHDC3-201ENST00000244670 PSPHP1O15172 72 aa9.7□□□□□ -0.86
KLHDC3-201ENST00000244670 HRES1P13985 223 aa9.7□□□□□ -0.86
KLHDC3-201ENST00000244670 IGKV2D-30A0A075B6S6 120 aa9.66□□□□□ -0.86
KLHDC3-201ENST00000244670 Q75L30 129 aa9.64□□□□□ -0.87
KLHDC3-201ENST00000244670 BRK1Q8WUW1 75 aa9.64□□□□□ -0.87
KLHDC3-201ENST00000244670 A8MUN3 132 aa9.63□□□□□ -0.87
KLHDC3-201ENST00000244670 ACYP2P14621 99 aa9.63□□□□□ -0.87
KLHDC3-201ENST00000244670 XP32Q5T750 250 aa9.63□□□□□ -0.87
KLHDC3-201ENST00000244670 PRO0628Q9UI54 55 aa9.61□□□□□ -0.87
KLHDC3-201ENST00000244670 DMAC1Q96GE9 116 aa9.6□□□□□ -0.87
KLHDC3-201ENST00000244670 PRR15LQ9BU68 103 aa9.58□□□□□ -0.88
KLHDC3-201ENST00000244670 LPAP08519 4548 aa9.57□□□□□ -0.88
KLHDC3-201ENST00000244670 Q5VV11 94 aa9.56□□□□□ -0.88
KLHDC3-201ENST00000244670 RPL37P61927 97 aaKnown RBP9.56□□□□□ -0.88
KLHDC3-201ENST00000244670 C7orf65Q6ZTY9 151 aa9.56□□□□□ -0.88
KLHDC3-201ENST00000244670 PCLOQ9Y6V0 5065 aa9.55□□□□□ -0.88
KLHDC3-201ENST00000244670 TPRXLQ17RH7 258 aa9.54□□□□□ -0.88
KLHDC3-201ENST00000244670 CHKB-CPT1BH3BT56 60 aa9.53□□□□□ -0.88
KLHDC3-201ENST00000244670 ATP11AUNQ6ZP68 121 aa9.53□□□□□ -0.88
KLHDC3-201ENST00000244670 LINC01558Q9Y6Z2 57 aa9.52□□□□□ -0.89
KLHDC3-201ENST00000244670 LRP2P98164 4655 aa9.5□□□□□ -0.89
KLHDC3-201ENST00000244670 SPINK7P58062 85 aa9.46□□□□□ -0.89
KLHDC3-201ENST00000244670 HERC1Q15751 4861 aa9.39□□□□□ -0.91
KLHDC3-201ENST00000244670 A6NED7 52 aa9.38□□□□□ -0.91
KLHDC3-201ENST00000244670 A8MU10 97 aa9.3□□□□□ -0.92
KLHDC3-201ENST00000244670 KRTAP3-1Q9BYR8 98 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms