RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 WFDC13Q8IUB5 93 aa13.59□□□□□ -0.23
RRP9-201ENST00000232888 C8orf17Q9NRJ1 99 aa13.59□□□□□ -0.23
RRP9-201ENST00000232888 IGHV6-1A0A0B4J1U7 121 aa13.58□□□□□ -0.23
RRP9-201ENST00000232888 OCR1Q9BZK8 76 aa13.58□□□□□ -0.23
RRP9-201ENST00000232888 CCDC179H3BU77 68 aa13.56□□□□□ -0.24
RRP9-201ENST00000232888 hDV103S1A0JD37 113 aa13.55□□□□□ -0.24
RRP9-201ENST00000232888 C8orf87E5RJ46 101 aa13.55□□□□□ -0.24
RRP9-201ENST00000232888 KRTAP17-1Q9BYP8 105 aa13.54□□□□□ -0.24
RRP9-201ENST00000232888 KRTAP10-8P60410 259 aa13.53□□□□□ -0.24
RRP9-201ENST00000232888 EPPK1P58107 5090 aaKnown RBP13.49□□□□□ -0.25
RRP9-201ENST00000232888 KIAA1109Q2LD37 5005 aa13.49□□□□□ -0.25
RRP9-201ENST00000232888 TMEM254Q8TBM7 123 aa13.49□□□□□ -0.25
RRP9-201ENST00000232888 LINC00313P59037 77 aa13.44□□□□□ -0.26
RRP9-201ENST00000232888 MRPL34Q9BQ48 92 aaKnown RBP13.44□□□□□ -0.26
RRP9-201ENST00000232888 NOTCH2NLQ7Z3S9 236 aa13.43□□□□□ -0.26
RRP9-201ENST00000232888 TP53AIP1Q9HCN2 124 aa13.41□□□□□ -0.26
RRP9-201ENST00000232888 C5orf47Q569G3 176 aa13.41□□□□□ -0.26
RRP9-201ENST00000232888 C20orf197Q8N268 126 aa13.39□□□□□ -0.27
RRP9-201ENST00000232888 KLKP1Q107X0 134 aa13.36□□□□□ -0.27
RRP9-201ENST00000232888 OXTP01178 125 aa13.34□□□□□ -0.27
RRP9-201ENST00000232888 A0A0U1RQV1 116 aa13.3□□□□□ -0.28
RRP9-201ENST00000232888 MP68P56378 58 aa13.3□□□□□ -0.28
RRP9-201ENST00000232888 NDUFS5O43920 106 aa13.29□□□□□ -0.28
RRP9-201ENST00000232888 H3BPC8 53 aa13.28□□□□□ -0.28
RRP9-201ENST00000232888 MT1HL1P0DM35 61 aa13.28□□□□□ -0.28
RRP9-201ENST00000232888 Q8N9P0 234 aaPredicted RBP13.27□□□□□ -0.29
RRP9-201ENST00000232888 KRTAP16-1A8MUX0 517 aa13.26□□□□□ -0.29
RRP9-201ENST00000232888 NDUFC1O43677 76 aa13.25□□□□□ -0.29
RRP9-201ENST00000232888 FLG2Q5D862 2391 aaPredicted RBP13.25□□□□□ -0.29
RRP9-201ENST00000232888 TRAV22A0A0B4J277 110 aa13.24□□□□□ -0.29
RRP9-201ENST00000232888 SNURFQ9Y675 71 aa13.24□□□□□ -0.29
RRP9-201ENST00000232888 H0Y9P7 68 aa13.23□□□□□ -0.29
RRP9-201ENST00000232888 TNXBP22105 4242 aa13.21□□□□□ -0.29
RRP9-201ENST00000232888 LRP1Q07954 4544 aaKnown RBP13.21□□□□□ -0.29
RRP9-201ENST00000232888 FP248Q71RG6 208 aaPredicted RBP13.21□□□□□ -0.29
RRP9-201ENST00000232888 CYSTM1Q9H1C7 97 aa13.21□□□□□ -0.29
RRP9-201ENST00000232888 FAT3Q8TDW7 4589 aa13.21□□□□□ -0.3
RRP9-201ENST00000232888 ZCCHC13Q8WW36 166 aaKnown RBP13.2□□□□□ -0.3
RRP9-201ENST00000232888 RETNLBQ9BQ08 111 aa13.19□□□□□ -0.3
RRP9-201ENST00000232888 KRTAP4-5Q9BYR2 181 aa13.19□□□□□ -0.3
RRP9-201ENST00000232888 H7BZZ5 65 aa13.15□□□□□ -0.3
RRP9-201ENST00000232888 TMEM258P61165 79 aa13.15□□□□□ -0.3
RRP9-201ENST00000232888 LINC00208Q96KT6 92 aa13.15□□□□□ -0.3
RRP9-201ENST00000232888 C1orf64Q8NEQ6 169 aa13.11□□□□□ -0.31
RRP9-201ENST00000232888 BIRC6Q9NR09 4857 aa13.09□□□□□ -0.31
RRP9-201ENST00000232888 KRTAP13-3Q3SY46 172 aa13.07□□□□□ -0.32
RRP9-201ENST00000232888 Q5W150 140 aa13.06□□□□□ -0.32
RRP9-201ENST00000232888 DMBT1Q9UGM3 2413 aaPredicted RBP13.05□□□□□ -0.32
RRP9-201ENST00000232888 C9orf92A6NGG3 77 aa13.04□□□□□ -0.32
RRP9-201ENST00000232888 C20orf166-AS1Q96NR2 134 aa13.04□□□□□ -0.32
RRP9-201ENST00000232888 LOC101927531A0A1B0GV80 90 aa13.03□□□□□ -0.32
RRP9-201ENST00000232888 A8MUU9 505 aa13.02□□□□□ -0.33
RRP9-201ENST00000232888 IGLV7-46A0A075B6I9 117 aa13.01□□□□□ -0.33
RRP9-201ENST00000232888 MYCBP2O75592 4640 aa13□□□□□ -0.33
RRP9-201ENST00000232888 ATP5EP56381 51 aaPredicted RBP12.98□□□□□ -0.33
RRP9-201ENST00000232888 FAM236DA0A1B0GTK5 79 aa12.96□□□□□ -0.33
RRP9-201ENST00000232888 FAM236CP0DP71 79 aa12.96□□□□□ -0.33
RRP9-201ENST00000232888 HERC2O95714 4834 aa12.95□□□□□ -0.34
RRP9-201ENST00000232888 Q75L30 129 aa12.93□□□□□ -0.34
RRP9-201ENST00000232888 J3QL48 77 aa12.9□□□□□ -0.35
RRP9-201ENST00000232888 CYP4F30PQ9H0H9 118 aa12.9□□□□□ -0.35
RRP9-201ENST00000232888 SPANXA2-OT1Q8N9U9 137 aa12.89□□□□□ -0.35
RRP9-201ENST00000232888 IGKV2-30P06310 120 aa12.88□□□□□ -0.35
RRP9-201ENST00000232888 PRR4Q16378 134 aa12.88□□□□□ -0.35
RRP9-201ENST00000232888 PCOTHQ58A44 107 aa12.82□□□□□ -0.36
RRP9-201ENST00000232888 ABCA13Q86UQ4 5058 aa12.8□□□□□ -0.36
RRP9-201ENST00000232888 TPRXLQ17RH7 258 aa12.8□□□□□ -0.36
RRP9-201ENST00000232888 RPS28P62857 69 aaKnown RBP12.78□□□□□ -0.36
RRP9-201ENST00000232888 XP32Q5T750 250 aa12.77□□□□□ -0.36
RRP9-201ENST00000232888 RPL37P61927 97 aaKnown RBP12.76□□□□□ -0.37
RRP9-201ENST00000232888 IGKV2D-30A0A075B6S6 120 aa12.74□□□□□ -0.37
RRP9-201ENST00000232888 C7orf65Q6ZTY9 151 aa12.74□□□□□ -0.37
RRP9-201ENST00000232888 ATP11AUNQ6ZP68 121 aa12.73□□□□□ -0.37
RRP9-201ENST00000232888 SERP1Q9Y6X1 66 aa12.73□□□□□ -0.37
RRP9-201ENST00000232888 HRES1P13985 223 aa12.66□□□□□ -0.38
RRP9-201ENST00000232888 SPINK7P58062 85 aa12.59□□□□□ -0.39
RRP9-201ENST00000232888 DMAC1Q96GE9 116 aa12.52□□□□□ -0.4
RRP9-201ENST00000232888 ACYP2P14621 99 aa12.48□□□□□ -0.41
RRP9-201ENST00000232888 A8MUN3 132 aa12.43□□□□□ -0.42
RRP9-201ENST00000232888 COA5Q86WW8 74 aa12.43□□□□□ -0.42
RRP9-201ENST00000232888 SMIM26A0A096LP01 95 aa12.42□□□□□ -0.42
RRP9-201ENST00000232888 C4orf26Q17RF5 130 aa12.39□□□□□ -0.43
RRP9-201ENST00000232888 SEC61BP60468 96 aaKnown RBP12.38□□□□□ -0.43
RRP9-201ENST00000232888 PCLOQ9Y6V0 5065 aa12.34□□□□□ -0.43
RRP9-201ENST00000232888 COX6B2Q6YFQ2 88 aa12.31□□□□□ -0.44
RRP9-201ENST00000232888 CHKB-CPT1BH3BT56 60 aa12.26□□□□□ -0.45
RRP9-201ENST00000232888 LRP2P98164 4655 aa12.24□□□□□ -0.45
RRP9-201ENST00000232888 KRTAP3-1Q9BYR8 98 aa12.23□□□□□ -0.45
RRP9-201ENST00000232888 LPAP08519 4548 aa12.23□□□□□ -0.45
RRP9-201ENST00000232888 V9GYY9 64 aa12.17□□□□□ -0.46
RRP9-201ENST00000232888 Q1T7F1 81 aa12.16□□□□□ -0.46
RRP9-201ENST00000232888 MPLKIPQ8TAP9 179 aa12.14□□□□□ -0.47
RRP9-201ENST00000232888 RBM12B-AS1Q9P1G2 102 aa12.1□□□□□ -0.47
RRP9-201ENST00000232888 SPTSSBQ8NFR3 76 aa12.08□□□□□ -0.48
RRP9-201ENST00000232888 HERC1Q15751 4861 aa12.02□□□□□ -0.49
RRP9-201ENST00000232888 LINC01558Q9Y6Z2 57 aa12.01□□□□□ -0.49
RRP9-201ENST00000232888 HMCN2Q8NDA2 5059 aa12□□□□□ -0.49
RRP9-201ENST00000232888 H1FX-AS1Q4G0G2 97 aa12□□□□□ -0.49
RRP9-201ENST00000232888 MUC17Q685J3 4493 aa11.98□□□□□ -0.49
RRP9-201ENST00000232888 KRTAP4-1Q9BYQ7 146 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms