RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 Q5W150 140 aa5.05□□□□□ -1.6
SPARC-201ENST00000231061 IGLV5-48A0A075B6I7 105 aa5.04□□□□□ -1.6
SPARC-201ENST00000231061 STAB2Q8WWQ8 2551 aa5.03□□□□□ -1.6
SPARC-201ENST00000231061 A0A087WTM6 91 aa5.03□□□□□ -1.6
SPARC-201ENST00000231061 HRES1P13985 223 aa5.03□□□□□ -1.6
SPARC-201ENST00000231061 LINC00304Q8N9R0 145 aa5.03□□□□□ -1.6
SPARC-201ENST00000231061 A0A087WSZ3 146 aa5.02□□□□□ -1.61
SPARC-201ENST00000231061 KRTAP7-1Q8IUC3 87 aa5.02□□□□□ -1.61
SPARC-201ENST00000231061 A0A0G2JQZ4 141 aa5.01□□□□□ -1.61
SPARC-201ENST00000231061 A0A1W2PNN7 141 aa5.01□□□□□ -1.61
SPARC-201ENST00000231061 ANK2Q01484 3957 aa5.01□□□□□ -1.61
SPARC-201ENST00000231061 SPRR1AP35321 89 aa5.01□□□□□ -1.61
SPARC-201ENST00000231061 PRLHP81277 87 aa5□□□□□ -1.61
SPARC-201ENST00000231061 CAMK2N1Q7Z7J9 78 aa5□□□□□ -1.61
SPARC-201ENST00000231061 KRTAP15-1Q3LI76 137 aa4.99□□□□□ -1.61
SPARC-201ENST00000231061 UBE2DNLQ8IWF7 75 aa4.99□□□□□ -1.61
SPARC-201ENST00000231061 FBN3Q75N90 2809 aa4.99□□□□□ -1.61
SPARC-201ENST00000231061 PANO1I0J062 215 aa4.99□□□□□ -1.61
SPARC-201ENST00000231061 A0A096LNI7 61 aa4.98□□□□□ -1.61
SPARC-201ENST00000231061 K7EIL1 84 aa4.97□□□□□ -1.61
SPARC-201ENST00000231061 DSCR10P59022 87 aa4.97□□□□□ -1.61
SPARC-201ENST00000231061 Q96NJ1 140 aa4.96□□□□□ -1.61
SPARC-201ENST00000231061 IGFL1Q6UW32 110 aa4.96□□□□□ -1.62
SPARC-201ENST00000231061 KRTAP1-5Q9BYS1 174 aa4.95□□□□□ -1.62
SPARC-201ENST00000231061 CMYA5Q8N3K9 4069 aa4.95□□□□□ -1.62
SPARC-201ENST00000231061 DNHD1Q96M86 4753 aa4.94□□□□□ -1.62
SPARC-201ENST00000231061 NBDYA0A0U1RRE5 68 aa4.94□□□□□ -1.62
SPARC-201ENST00000231061 RPL37AP61513 92 aaKnown RBP4.93□□□□□ -1.62
SPARC-201ENST00000231061 HUWE1Q7Z6Z7 4374 aaKnown RBP4.91□□□□□ -1.62
SPARC-201ENST00000231061 WWC2-AS2Q96NR7 200 aa4.91□□□□□ -1.62
SPARC-201ENST00000231061 DNAH1Q9P2D7 4330 aa4.9□□□□□ -1.62
SPARC-201ENST00000231061 C14orf177Q52M58 125 aa4.9□□□□□ -1.62
SPARC-201ENST00000231061 DNAH3Q8TD57 4116 aa4.9□□□□□ -1.63
SPARC-201ENST00000231061 DNAH10Q8IVF4 4471 aa4.89□□□□□ -1.63
SPARC-201ENST00000231061 KRTAP11-1Q8IUC1 163 aa4.89□□□□□ -1.63
SPARC-201ENST00000231061 ACYP2P14621 99 aa4.88□□□□□ -1.63
SPARC-201ENST00000231061 APLNQ9ULZ1 77 aa4.87□□□□□ -1.63
SPARC-201ENST00000231061 LYSTQ99698 3801 aa4.83□□□□□ -1.64
SPARC-201ENST00000231061 LCE2DQ5TA82 110 aaPredicted RBP4.83□□□□□ -1.64
SPARC-201ENST00000231061 SRRM2Q9UQ35 2752 aaKnown RBP4.83□□□□□ -1.64
SPARC-201ENST00000231061 Q8N1X5 172 aa4.83□□□□□ -1.64
SPARC-201ENST00000231061 CSMD3Q7Z407 3707 aa4.82□□□□□ -1.64
SPARC-201ENST00000231061 KRTAP23-1A1A580 65 aa4.82□□□□□ -1.64
SPARC-201ENST00000231061 SPRR1BP22528 89 aa4.82□□□□□ -1.64
SPARC-201ENST00000231061 DNAH9Q9NYC9 4486 aa4.82□□□□□ -1.64
SPARC-201ENST00000231061 TENM2Q9NT68 2774 aa4.81□□□□□ -1.64
SPARC-201ENST00000231061 KRTAP29-1A8MX34 341 aaPredicted RBP4.81□□□□□ -1.64
SPARC-201ENST00000231061 IGLV7-43P04211 117 aa4.8□□□□□ -1.64
SPARC-201ENST00000231061 MMP24-AS1A0A0U1RRL7 71 aa4.77□□□□□ -1.65
SPARC-201ENST00000231061 COL7A1Q02388 2944 aa4.77□□□□□ -1.65
SPARC-201ENST00000231061 PSORS1C2Q9UIG4 136 aa4.77□□□□□ -1.65
SPARC-201ENST00000231061 ANAPC11Q9NYG5 84 aa4.76□□□□□ -1.65
SPARC-201ENST00000231061 Q6ZRN7 208 aaPredicted RBP4.76□□□□□ -1.65
SPARC-201ENST00000231061 SPACA4Q8TDM5 124 aa4.76□□□□□ -1.65
SPARC-201ENST00000231061 KRTAP13-1Q8IUC0 172 aa4.76□□□□□ -1.65
SPARC-201ENST00000231061 PLECQ15149 4684 aaKnown RBP4.75□□□□□ -1.65
SPARC-201ENST00000231061 TYMSOSQ8TAI1 123 aa4.75□□□□□ -1.65
SPARC-201ENST00000231061 LY6G6CO95867 125 aa4.74□□□□□ -1.65
SPARC-201ENST00000231061 MEGF8Q7Z7M0 2845 aa4.74□□□□□ -1.65
SPARC-201ENST00000231061 A0A1B0GU33 70 aa4.73□□□□□ -1.65
SPARC-201ENST00000231061 SPINK6Q6UWN8 80 aa4.73□□□□□ -1.65
SPARC-201ENST00000231061 DNAH7Q8WXX0 4024 aa4.73□□□□□ -1.65
SPARC-201ENST00000231061 C10orf95Q9H7T3 257 aa4.72□□□□□ -1.65
SPARC-201ENST00000231061 TPRXLQ17RH7 258 aa4.71□□□□□ -1.65
SPARC-201ENST00000231061 TP53AIP1Q9HCN2 124 aa4.7□□□□□ -1.66
SPARC-201ENST00000231061 R4GN34 69 aa4.7□□□□□ -1.66
SPARC-201ENST00000231061 DYNC2H1Q8NCM8 4307 aaKnown RBP4.69□□□□□ -1.66
SPARC-201ENST00000231061 MRPL34Q9BQ48 92 aaKnown RBP4.68□□□□□ -1.66
SPARC-201ENST00000231061 KRTAP3-3Q9BYR6 98 aa4.66□□□□□ -1.66
SPARC-201ENST00000231061 KRTAP3-2Q9BYR7 98 aa4.66□□□□□ -1.66
SPARC-201ENST00000231061 DMBT1Q9UGM3 2413 aaPredicted RBP4.66□□□□□ -1.66
SPARC-201ENST00000231061 STARD9Q9P2P6 4700 aa4.66□□□□□ -1.66
SPARC-201ENST00000231061 KRTAP21-3Q3LHN1 58 aa4.65□□□□□ -1.67
SPARC-201ENST00000231061 VPS13DQ5THJ4 4388 aa4.64□□□□□ -1.67
SPARC-201ENST00000231061 H0YAA0 97 aa4.63□□□□□ -1.67
SPARC-201ENST00000231061 DNAH8Q96JB1 4490 aa4.62□□□□□ -1.67
SPARC-201ENST00000231061 FRAS1Q86XX4 4008 aa4.61□□□□□ -1.67
SPARC-201ENST00000231061 DNAH17Q9UFH2 4485 aa4.6□□□□□ -1.67
SPARC-201ENST00000231061 HECTD4Q9Y4D8 3996 aa4.6□□□□□ -1.67
SPARC-201ENST00000231061 DNAH2Q9P225 4427 aa4.59□□□□□ -1.68
SPARC-201ENST00000231061 KMT2AQ03164 3969 aa4.58□□□□□ -1.68
SPARC-201ENST00000231061 SPINK1P00995 79 aa4.58□□□□□ -1.68
SPARC-201ENST00000231061 PRKDCP78527 4128 aaKnown RBP4.58□□□□□ -1.68
SPARC-201ENST00000231061 KRTAP10-2P60368 255 aa4.57□□□□□ -1.68
SPARC-201ENST00000231061 PRO2289Q9P1D8 64 aa4.56□□□□□ -1.68
SPARC-201ENST00000231061 Q6ZSA8 131 aa4.55□□□□□ -1.68
SPARC-201ENST00000231061 KRTAP13-3Q3SY46 172 aa4.52□□□□□ -1.69
SPARC-201ENST00000231061 KRTAP13-2Q52LG2 175 aa4.52□□□□□ -1.69
SPARC-201ENST00000231061 ALMS1Q8TCU4 4167 aa4.51□□□□□ -1.69
SPARC-201ENST00000231061 DNAH11Q96DT5 4516 aa4.51□□□□□ -1.69
SPARC-201ENST00000231061 IGKV2D-30A0A075B6S6 120 aa4.5□□□□□ -1.69
SPARC-201ENST00000231061 IGKV2-30P06310 120 aa4.5□□□□□ -1.69
SPARC-201ENST00000231061 KRTAP10-1P60331 282 aa4.5□□□□□ -1.69
SPARC-201ENST00000231061 KRTAP10-8P60410 259 aa4.49□□□□□ -1.69
SPARC-201ENST00000231061 DNAH6Q9C0G6 4158 aa4.49□□□□□ -1.69
SPARC-201ENST00000231061 DNAH5Q8TE73 4624 aa4.48□□□□□ -1.69
SPARC-201ENST00000231061 LRP1BQ9NZR2 4599 aa4.44□□□□□ -1.7
SPARC-201ENST00000231061 KRTAP1-4P0C5Y4 121 aa4.44□□□□□ -1.7
SPARC-201ENST00000231061 SMR3BP02814 79 aaPredicted RBP4.43□□□□□ -1.7
SPARC-201ENST00000231061 PLAC4Q8WY50 150 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms