RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 LINC00208Q96KT6 92 aa10.11□□□□□ -0.79
CHGA-201ENST00000216492 MMP24-AS1A0A0U1RRL7 71 aa10.1□□□□□ -0.79
CHGA-201ENST00000216492 ANAPC11Q9NYG5 84 aa10.1□□□□□ -0.79
CHGA-201ENST00000216492 hDV103S1A0JD37 113 aa10.1□□□□□ -0.79
CHGA-201ENST00000216492 MOBPQ13875 183 aa10.09□□□□□ -0.79
CHGA-201ENST00000216492 CYP4F30PQ9H0H9 118 aa10.09□□□□□ -0.79
CHGA-201ENST00000216492 Q1T7F1 81 aa10.08□□□□□ -0.8
CHGA-201ENST00000216492 Q96NJ1 140 aa10.08□□□□□ -0.8
CHGA-201ENST00000216492 SMR3BP02814 79 aaPredicted RBP10.07□□□□□ -0.8
CHGA-201ENST00000216492 C1orf64Q8NEQ6 169 aa10.06□□□□□ -0.8
CHGA-201ENST00000216492 VPS13BQ7Z7G8 4022 aa10.06□□□□□ -0.8
CHGA-201ENST00000216492 PMAIP1Q13794 54 aa10.06□□□□□ -0.8
CHGA-201ENST00000216492 CDK2AP2O75956 126 aa10.05□□□□□ -0.8
CHGA-201ENST00000216492 TP53AIP1Q9HCN2 124 aa10.03□□□□□ -0.8
CHGA-201ENST00000216492 SPANXA2-OT1Q8N9U9 137 aa10.02□□□□□ -0.81
CHGA-201ENST00000216492 C8orf17Q9NRJ1 99 aa10.02□□□□□ -0.81
CHGA-201ENST00000216492 PRR4Q16378 134 aa10.01□□□□□ -0.81
CHGA-201ENST00000216492 ASB16-AS1Q495Z4 193 aa10.01□□□□□ -0.81
CHGA-201ENST00000216492 A0A1B0GVX0 72 aa10□□□□□ -0.81
CHGA-201ENST00000216492 APOBP04114 4563 aaKnown RBP9.99□□□□□ -0.81
CHGA-201ENST00000216492 IGHV6-1A0A0B4J1U7 121 aa9.98□□□□□ -0.81
CHGA-201ENST00000216492 SPINK6Q6UWN8 80 aa9.96□□□□□ -0.81
CHGA-201ENST00000216492 A0A087X002 238 aa9.93□□□□□ -0.82
CHGA-201ENST00000216492 KRTAP1-4P0C5Y4 121 aa9.93□□□□□ -0.82
CHGA-201ENST00000216492 NDUFS5O43920 106 aa9.92□□□□□ -0.82
CHGA-201ENST00000216492 SSBP3-AS1Q7Z2R9 100 aa9.92□□□□□ -0.82
CHGA-201ENST00000216492 CD164Q04900 197 aa9.92□□□□□ -0.82
CHGA-201ENST00000216492 MRPL34Q9BQ48 92 aaKnown RBP9.92□□□□□ -0.82
CHGA-201ENST00000216492 FAT1Q14517 4588 aa9.91□□□□□ -0.82
CHGA-201ENST00000216492 PLA2G1BP04054 148 aaKnown RBP9.91□□□□□ -0.82
CHGA-201ENST00000216492 KRTAP10-4P60372 401 aaPredicted RBP9.91□□□□□ -0.82
CHGA-201ENST00000216492 KRTAP13-2Q52LG2 175 aa9.89□□□□□ -0.83
CHGA-201ENST00000216492 FAM229AH3BQW9 127 aa9.87□□□□□ -0.83
CHGA-201ENST00000216492 IGLV7-46A0A075B6I9 117 aa9.86□□□□□ -0.83
CHGA-201ENST00000216492 PSPHP1O15172 72 aa9.84□□□□□ -0.83
CHGA-201ENST00000216492 PCOTHQ58A44 107 aa9.83□□□□□ -0.84
CHGA-201ENST00000216492 NOTCH2NLQ7Z3S9 236 aa9.82□□□□□ -0.84
CHGA-201ENST00000216492 C8orf87E5RJ46 101 aa9.8□□□□□ -0.84
CHGA-201ENST00000216492 TYMSOSQ8TAI1 123 aa9.8□□□□□ -0.84
CHGA-201ENST00000216492 PRR26Q8N8Z3 221 aa9.78□□□□□ -0.84
CHGA-201ENST00000216492 HSPG2P98160 4391 aa9.77□□□□□ -0.85
CHGA-201ENST00000216492 A8MUN3 132 aa9.77□□□□□ -0.85
CHGA-201ENST00000216492 Q5VSD8 79 aa9.77□□□□□ -0.85
CHGA-201ENST00000216492 EPPK1P58107 5090 aaKnown RBP9.77□□□□□ -0.85
CHGA-201ENST00000216492 COA5Q86WW8 74 aa9.76□□□□□ -0.85
CHGA-201ENST00000216492 LIMD2Q9BT23 127 aa9.76□□□□□ -0.85
CHGA-201ENST00000216492 LOC101927531A0A1B0GV80 90 aa9.76□□□□□ -0.85
CHGA-201ENST00000216492 Q5VV11 94 aa9.75□□□□□ -0.85
CHGA-201ENST00000216492 RYR1P21817 5038 aa9.75□□□□□ -0.85
CHGA-201ENST00000216492 C4orf48Q5BLP8 95 aa9.73□□□□□ -0.85
CHGA-201ENST00000216492 Q8N9P0 234 aaPredicted RBP9.71□□□□□ -0.85
CHGA-201ENST00000216492 KIAA1109Q2LD37 5005 aa9.71□□□□□ -0.85
CHGA-201ENST00000216492 KTN1-AS1Q86SY8 53 aa9.71□□□□□ -0.86
CHGA-201ENST00000216492 LINC00313P59037 77 aa9.69□□□□□ -0.86
CHGA-201ENST00000216492 KRTAP17-1Q9BYP8 105 aa9.69□□□□□ -0.86
CHGA-201ENST00000216492 SPINK1P00995 79 aa9.68□□□□□ -0.86
CHGA-201ENST00000216492 CHKB-CPT1BH3BT56 60 aa9.67□□□□□ -0.86
CHGA-201ENST00000216492 KRTAP13-3Q3SY46 172 aa9.67□□□□□ -0.86
CHGA-201ENST00000216492 Q5W150 140 aa9.67□□□□□ -0.86
CHGA-201ENST00000216492 ATP11AUNQ6ZP68 121 aa9.67□□□□□ -0.86
CHGA-201ENST00000216492 Q8N1X5 172 aa9.66□□□□□ -0.86
CHGA-201ENST00000216492 LINC00304Q8N9R0 145 aa9.66□□□□□ -0.86
CHGA-201ENST00000216492 SPAG11AQ6PDA7 123 aa9.64□□□□□ -0.87
CHGA-201ENST00000216492 Q75L30 129 aa9.63□□□□□ -0.87
CHGA-201ENST00000216492 PRR15LQ9BU68 103 aa9.63□□□□□ -0.87
CHGA-201ENST00000216492 HRES1P13985 223 aa9.61□□□□□ -0.87
CHGA-201ENST00000216492 A8MU10 97 aa9.6□□□□□ -0.87
CHGA-201ENST00000216492 RBM12B-AS1Q9P1G2 102 aa9.59□□□□□ -0.87
CHGA-201ENST00000216492 RPS29P62273 56 aaKnown RBP9.59□□□□□ -0.87
CHGA-201ENST00000216492 PKHD1L1Q86WI1 4243 aa9.55□□□□□ -0.88
CHGA-201ENST00000216492 LCA10Q71F78 164 aa9.55□□□□□ -0.88
CHGA-201ENST00000216492 A6NN06 94 aa9.54□□□□□ -0.88
CHGA-201ENST00000216492 KRTAP10-8P60410 259 aa9.54□□□□□ -0.88
CHGA-201ENST00000216492 SPTSSBQ8NFR3 76 aa9.54□□□□□ -0.88
CHGA-201ENST00000216492 LINC01558Q9Y6Z2 57 aa9.54□□□□□ -0.88
CHGA-201ENST00000216492 ACYP2P14621 99 aa9.54□□□□□ -0.88
CHGA-201ENST00000216492 CDC42SE1Q9NRR8 79 aa9.54□□□□□ -0.88
CHGA-201ENST00000216492 A6NED7 52 aa9.53□□□□□ -0.88
CHGA-201ENST00000216492 LRP1Q07954 4544 aaKnown RBP9.53□□□□□ -0.88
CHGA-201ENST00000216492 KRTAP16-1A8MUX0 517 aa9.52□□□□□ -0.88
CHGA-201ENST00000216492 IGKV2-30P06310 120 aa9.51□□□□□ -0.89
CHGA-201ENST00000216492 RETNLBQ9BQ08 111 aa9.5□□□□□ -0.89
CHGA-201ENST00000216492 FLG2Q5D862 2391 aaPredicted RBP9.49□□□□□ -0.89
CHGA-201ENST00000216492 DMAC1Q96GE9 116 aa9.49□□□□□ -0.89
CHGA-201ENST00000216492 C7orf65Q6ZTY9 151 aa9.47□□□□□ -0.89
CHGA-201ENST00000216492 KRTAP4-5Q9BYR2 181 aa9.44□□□□□ -0.9
CHGA-201ENST00000216492 TNXBP22105 4242 aa9.44□□□□□ -0.9
CHGA-201ENST00000216492 MYCBP2O75592 4640 aa9.41□□□□□ -0.9
CHGA-201ENST00000216492 FAT3Q8TDW7 4589 aa9.4□□□□□ -0.9
CHGA-201ENST00000216492 MT1HL1P0DM35 61 aa9.4□□□□□ -0.91
CHGA-201ENST00000216492 IGKV2D-30A0A075B6S6 120 aa9.38□□□□□ -0.91
CHGA-201ENST00000216492 DMBT1Q9UGM3 2413 aaPredicted RBP9.37□□□□□ -0.91
CHGA-201ENST00000216492 BIRC6Q9NR09 4857 aa9.35□□□□□ -0.91
CHGA-201ENST00000216492 SPINK7P58062 85 aa9.28□□□□□ -0.92
CHGA-201ENST00000216492 C9orf92A6NGG3 77 aa9.26□□□□□ -0.93
CHGA-201ENST00000216492 A0A1B0GU69 56 aa9.24□□□□□ -0.93
CHGA-201ENST00000216492 HERC2O95714 4834 aa9.24□□□□□ -0.93
CHGA-201ENST00000216492 ABCA13Q86UQ4 5058 aa9.22□□□□□ -0.93
CHGA-201ENST00000216492 C20orf166-AS1Q96NR2 134 aa9.17□□□□□ -0.94
CHGA-201ENST00000216492 A8MUU9 505 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms