RNA–Protein interactions for RNA: ENST00000215794.7

USP18-201, Transcript of ubiquitin specific peptidase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP18, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP18-201ENST00000215794 hDV103S1A0JD37 113 aa10.79□□□□□ -0.68
USP18-201ENST00000215794 Q96NJ1 140 aa10.79□□□□□ -0.68
USP18-201ENST00000215794 FAT1Q14517 4588 aa10.77□□□□□ -0.69
USP18-201ENST00000215794 Q1T7F1 81 aa10.76□□□□□ -0.69
USP18-201ENST00000215794 KRTAP29-1A8MX34 341 aaPredicted RBP10.76□□□□□ -0.69
USP18-201ENST00000215794 ZCCHC13Q8WW36 166 aaKnown RBP10.75□□□□□ -0.69
USP18-201ENST00000215794 C4orf48Q5BLP8 95 aa10.74□□□□□ -0.69
USP18-201ENST00000215794 HSPG2P98160 4391 aa10.74□□□□□ -0.69
USP18-201ENST00000215794 NDUFB1O75438 58 aa10.73□□□□□ -0.69
USP18-201ENST00000215794 KIAA1109Q2LD37 5005 aa10.73□□□□□ -0.69
USP18-201ENST00000215794 CASC2Q6XLA1 102 aa10.73□□□□□ -0.69
USP18-201ENST00000215794 CYP4F30PQ9H0H9 118 aa10.73□□□□□ -0.69
USP18-201ENST00000215794 RYR1P21817 5038 aa10.7□□□□□ -0.7
USP18-201ENST00000215794 MMP24-AS1A0A0U1RRL7 71 aa10.69□□□□□ -0.7
USP18-201ENST00000215794 C1orf64Q8NEQ6 169 aa10.69□□□□□ -0.7
USP18-201ENST00000215794 KRTAP17-1Q9BYP8 105 aa10.65□□□□□ -0.7
USP18-201ENST00000215794 A0A087X002 238 aa10.63□□□□□ -0.71
USP18-201ENST00000215794 MP68P56378 58 aa10.63□□□□□ -0.71
USP18-201ENST00000215794 IGHV6-1A0A0B4J1U7 121 aa10.61□□□□□ -0.71
USP18-201ENST00000215794 H3BPC8 53 aa10.6□□□□□ -0.71
USP18-201ENST00000215794 CDK2AP2O75956 126 aa10.6□□□□□ -0.71
USP18-201ENST00000215794 KRTAP13-2Q52LG2 175 aa10.59□□□□□ -0.71
USP18-201ENST00000215794 C8orf17Q9NRJ1 99 aa10.59□□□□□ -0.71
USP18-201ENST00000215794 A0A1B0GVX0 72 aa10.58□□□□□ -0.72
USP18-201ENST00000215794 SPINK6Q6UWN8 80 aa10.58□□□□□ -0.72
USP18-201ENST00000215794 SSBP3-AS1Q7Z2R9 100 aa10.58□□□□□ -0.72
USP18-201ENST00000215794 ASB16-AS1Q495Z4 193 aa10.57□□□□□ -0.72
USP18-201ENST00000215794 NOTCH2NLQ7Z3S9 236 aa10.57□□□□□ -0.72
USP18-201ENST00000215794 H0Y9P7 68 aa10.56□□□□□ -0.72
USP18-201ENST00000215794 SPANXA2-OT1Q8N9U9 137 aa10.56□□□□□ -0.72
USP18-201ENST00000215794 LINC00208Q96KT6 92 aa10.55□□□□□ -0.72
USP18-201ENST00000215794 BIRC6Q9NR09 4857 aa10.55□□□□□ -0.72
USP18-201ENST00000215794 TRAV22A0A0B4J277 110 aa10.55□□□□□ -0.72
USP18-201ENST00000215794 KRTAP10-4P60372 401 aaPredicted RBP10.55□□□□□ -0.72
USP18-201ENST00000215794 KRTAP1-4P0C5Y4 121 aa10.54□□□□□ -0.72
USP18-201ENST00000215794 Q5VSD8 79 aa10.52□□□□□ -0.72
USP18-201ENST00000215794 KTN1-AS1Q86SY8 53 aa10.5□□□□□ -0.73
USP18-201ENST00000215794 RBM12B-AS1Q9P1G2 102 aa10.5□□□□□ -0.73
USP18-201ENST00000215794 LIMD2Q9BT23 127 aa10.48□□□□□ -0.73
USP18-201ENST00000215794 FAM229AH3BQW9 127 aa10.48□□□□□ -0.73
USP18-201ENST00000215794 PSPHP1O15172 72 aa10.48□□□□□ -0.73
USP18-201ENST00000215794 NDUFS5O43920 106 aa10.47□□□□□ -0.73
USP18-201ENST00000215794 PRR4Q16378 134 aa10.47□□□□□ -0.73
USP18-201ENST00000215794 MRPL34Q9BQ48 92 aaKnown RBP10.46□□□□□ -0.74
USP18-201ENST00000215794 PLA2G1BP04054 148 aaKnown RBP10.43□□□□□ -0.74
USP18-201ENST00000215794 Q8N1X5 172 aa10.42□□□□□ -0.74
USP18-201ENST00000215794 KRTAP4-5Q9BYR2 181 aa10.42□□□□□ -0.74
USP18-201ENST00000215794 TP53AIP1Q9HCN2 124 aa10.42□□□□□ -0.74
USP18-201ENST00000215794 A8MUN3 132 aa10.4□□□□□ -0.74
USP18-201ENST00000215794 PKHD1L1Q86WI1 4243 aa10.4□□□□□ -0.75
USP18-201ENST00000215794 LRP1Q07954 4544 aaKnown RBP10.38□□□□□ -0.75
USP18-201ENST00000215794 Q5VV11 94 aa10.37□□□□□ -0.75
USP18-201ENST00000215794 Q8N9P0 234 aaPredicted RBP10.37□□□□□ -0.75
USP18-201ENST00000215794 FLG2Q5D862 2391 aaPredicted RBP10.36□□□□□ -0.75
USP18-201ENST00000215794 MYCBP2O75592 4640 aa10.36□□□□□ -0.75
USP18-201ENST00000215794 TYMSOSQ8TAI1 123 aa10.36□□□□□ -0.75
USP18-201ENST00000215794 HERC2O95714 4834 aa10.35□□□□□ -0.75
USP18-201ENST00000215794 PCOTHQ58A44 107 aa10.33□□□□□ -0.76
USP18-201ENST00000215794 CHKB-CPT1BH3BT56 60 aa10.32□□□□□ -0.76
USP18-201ENST00000215794 C8orf87E5RJ46 101 aa10.31□□□□□ -0.76
USP18-201ENST00000215794 Q5W150 140 aa10.31□□□□□ -0.76
USP18-201ENST00000215794 PRR26Q8N8Z3 221 aa10.31□□□□□ -0.76
USP18-201ENST00000215794 ABCA13Q86UQ4 5058 aa10.31□□□□□ -0.76
USP18-201ENST00000215794 IGLV7-46A0A075B6I9 117 aa10.3□□□□□ -0.76
USP18-201ENST00000215794 LINC00313P59037 77 aa10.3□□□□□ -0.76
USP18-201ENST00000215794 LOC101927531A0A1B0GV80 90 aa10.29□□□□□ -0.76
USP18-201ENST00000215794 Q75L30 129 aa10.29□□□□□ -0.76
USP18-201ENST00000215794 PRR15LQ9BU68 103 aa10.28□□□□□ -0.76
USP18-201ENST00000215794 ATP11AUNQ6ZP68 121 aa10.27□□□□□ -0.77
USP18-201ENST00000215794 H3BS24 57 aa10.27□□□□□ -0.77
USP18-201ENST00000215794 FAT3Q8TDW7 4589 aa10.26□□□□□ -0.77
USP18-201ENST00000215794 KRTAP13-3Q3SY46 172 aa10.26□□□□□ -0.77
USP18-201ENST00000215794 COA5Q86WW8 74 aa10.24□□□□□ -0.77
USP18-201ENST00000215794 SPINK1P00995 79 aa10.24□□□□□ -0.77
USP18-201ENST00000215794 KRTAP16-1A8MUX0 517 aa10.22□□□□□ -0.77
USP18-201ENST00000215794 LINC00304Q8N9R0 145 aa10.22□□□□□ -0.77
USP18-201ENST00000215794 RETNLBQ9BQ08 111 aa10.21□□□□□ -0.77
USP18-201ENST00000215794 TNXBP22105 4242 aa10.21□□□□□ -0.78
USP18-201ENST00000215794 A6NED7 52 aa10.18□□□□□ -0.78
USP18-201ENST00000215794 LINC01558Q9Y6Z2 57 aa10.18□□□□□ -0.78
USP18-201ENST00000215794 CDC42SE1Q9NRR8 79 aa10.16□□□□□ -0.78
USP18-201ENST00000215794 A6NN06 94 aa10.15□□□□□ -0.78
USP18-201ENST00000215794 C7orf65Q6ZTY9 151 aa10.15□□□□□ -0.79
USP18-201ENST00000215794 LCA10Q71F78 164 aa10.14□□□□□ -0.79
USP18-201ENST00000215794 SPTSSBQ8NFR3 76 aa10.12□□□□□ -0.79
USP18-201ENST00000215794 SPAG11AQ6PDA7 123 aa10.11□□□□□ -0.79
USP18-201ENST00000215794 RPS29P62273 56 aaKnown RBP10.1□□□□□ -0.79
USP18-201ENST00000215794 A8MU10 97 aa10.1□□□□□ -0.79
USP18-201ENST00000215794 PCLOQ9Y6V0 5065 aa10.1□□□□□ -0.79
USP18-201ENST00000215794 MT1HL1P0DM35 61 aa10.07□□□□□ -0.8
USP18-201ENST00000215794 KRTAP10-8P60410 259 aa10.06□□□□□ -0.8
USP18-201ENST00000215794 IGKV2-30P06310 120 aa10.04□□□□□ -0.8
USP18-201ENST00000215794 HRES1P13985 223 aa10.03□□□□□ -0.8
USP18-201ENST00000215794 DMBT1Q9UGM3 2413 aaPredicted RBP10.02□□□□□ -0.81
USP18-201ENST00000215794 IGKV2D-30A0A075B6S6 120 aa9.97□□□□□ -0.81
USP18-201ENST00000215794 C9orf92A6NGG3 77 aa9.97□□□□□ -0.81
USP18-201ENST00000215794 J3QL48 77 aa9.91□□□□□ -0.82
USP18-201ENST00000215794 ACYP2P14621 99 aa9.9□□□□□ -0.82
USP18-201ENST00000215794 DMAC1Q96GE9 116 aa9.9□□□□□ -0.82
USP18-201ENST00000215794 SPINK7P58062 85 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms