RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 KRTAP29-1A8MX34 341 aaPredicted RBP13.03□□□□□ -0.32
HOXC8-201ENST00000040584 NDUFB1O75438 58 aa13.03□□□□□ -0.32
HOXC8-201ENST00000040584 MP68P56378 58 aa13.02□□□□□ -0.32
HOXC8-201ENST00000040584 Q8N1X5 172 aa13.02□□□□□ -0.32
HOXC8-201ENST00000040584 A0A087X002 238 aa13.01□□□□□ -0.33
HOXC8-201ENST00000040584 WFDC13Q8IUB5 93 aa13.01□□□□□ -0.33
HOXC8-201ENST00000040584 H3BPC8 53 aa13□□□□□ -0.33
HOXC8-201ENST00000040584 MOBPQ13875 183 aa13□□□□□ -0.33
HOXC8-201ENST00000040584 CASC2Q6XLA1 102 aa12.99□□□□□ -0.33
HOXC8-201ENST00000040584 FAM229BQ4G0N7 80 aa12.99□□□□□ -0.33
HOXC8-201ENST00000040584 PKHD1L1Q86WI1 4243 aa12.99□□□□□ -0.33
HOXC8-201ENST00000040584 BIRC6Q9NR09 4857 aa12.96□□□□□ -0.33
HOXC8-201ENST00000040584 KRTAP13-2Q52LG2 175 aa12.96□□□□□ -0.33
HOXC8-201ENST00000040584 HRCT1Q6UXD1 115 aa12.96□□□□□ -0.33
HOXC8-201ENST00000040584 FP248Q71RG6 208 aaPredicted RBP12.95□□□□□ -0.34
HOXC8-201ENST00000040584 hDV103S1A0JD37 113 aa12.91□□□□□ -0.34
HOXC8-201ENST00000040584 CYP4F30PQ9H0H9 118 aa12.91□□□□□ -0.34
HOXC8-201ENST00000040584 PRR26Q8N8Z3 221 aa12.89□□□□□ -0.35
HOXC8-201ENST00000040584 SSBP3-AS1Q7Z2R9 100 aa12.88□□□□□ -0.35
HOXC8-201ENST00000040584 TRAV22A0A0B4J277 110 aa12.86□□□□□ -0.35
HOXC8-201ENST00000040584 H0Y9P7 68 aa12.85□□□□□ -0.35
HOXC8-201ENST00000040584 TYMSOSQ8TAI1 123 aa12.85□□□□□ -0.35
HOXC8-201ENST00000040584 LINC00208Q96KT6 92 aa12.84□□□□□ -0.35
HOXC8-201ENST00000040584 MMP24-AS1A0A0U1RRL7 71 aa12.83□□□□□ -0.36
HOXC8-201ENST00000040584 KRTAP4-5Q9BYR2 181 aa12.83□□□□□ -0.36
HOXC8-201ENST00000040584 TP53AIP1Q9HCN2 124 aa12.82□□□□□ -0.36
HOXC8-201ENST00000040584 SPANXA2-OT1Q8N9U9 137 aa12.82□□□□□ -0.36
HOXC8-201ENST00000040584 Q96NJ1 140 aa12.82□□□□□ -0.36
HOXC8-201ENST00000040584 C1orf64Q8NEQ6 169 aa12.8□□□□□ -0.36
HOXC8-201ENST00000040584 LRP1Q07954 4544 aaKnown RBP12.79□□□□□ -0.36
HOXC8-201ENST00000040584 ASB16-AS1Q495Z4 193 aa12.78□□□□□ -0.36
HOXC8-201ENST00000040584 CD164Q04900 197 aa12.77□□□□□ -0.37
HOXC8-201ENST00000040584 FLG2Q5D862 2391 aaPredicted RBP12.77□□□□□ -0.37
HOXC8-201ENST00000040584 HERC2O95714 4834 aa12.75□□□□□ -0.37
HOXC8-201ENST00000040584 C8orf17Q9NRJ1 99 aa12.74□□□□□ -0.37
HOXC8-201ENST00000040584 FAT3Q8TDW7 4589 aa12.72□□□□□ -0.37
HOXC8-201ENST00000040584 A0A1B0GVX0 72 aa12.72□□□□□ -0.37
HOXC8-201ENST00000040584 MPLKIPQ8TAP9 179 aa12.72□□□□□ -0.37
HOXC8-201ENST00000040584 Q1T7F1 81 aa12.7□□□□□ -0.38
HOXC8-201ENST00000040584 MYCBP2O75592 4640 aa12.7□□□□□ -0.38
HOXC8-201ENST00000040584 C4orf48Q5BLP8 95 aa12.69□□□□□ -0.38
HOXC8-201ENST00000040584 LINC00304Q8N9R0 145 aa12.69□□□□□ -0.38
HOXC8-201ENST00000040584 PRO0628Q9UI54 55 aa12.68□□□□□ -0.38
HOXC8-201ENST00000040584 TNXBP22105 4242 aa12.67□□□□□ -0.38
HOXC8-201ENST00000040584 KRTAP10-8P60410 259 aa12.67□□□□□ -0.38
HOXC8-201ENST00000040584 V9GYY9 64 aa12.65□□□□□ -0.38
HOXC8-201ENST00000040584 IGHV6-1A0A0B4J1U7 121 aa12.63□□□□□ -0.39
HOXC8-201ENST00000040584 ABCA13Q86UQ4 5058 aa12.63□□□□□ -0.39
HOXC8-201ENST00000040584 PRR4Q16378 134 aa12.63□□□□□ -0.39
HOXC8-201ENST00000040584 SPINK1P00995 79 aa12.62□□□□□ -0.39
HOXC8-201ENST00000040584 MRPL34Q9BQ48 92 aaKnown RBP12.62□□□□□ -0.39
HOXC8-201ENST00000040584 SPAG11AQ6PDA7 123 aa12.61□□□□□ -0.39
HOXC8-201ENST00000040584 IGLV7-46A0A075B6I9 117 aa12.59□□□□□ -0.39
HOXC8-201ENST00000040584 MT1HL1P0DM35 61 aa12.57□□□□□ -0.4
HOXC8-201ENST00000040584 NDUFS5O43920 106 aa12.55□□□□□ -0.4
HOXC8-201ENST00000040584 RPS29P62273 56 aaKnown RBP12.55□□□□□ -0.4
HOXC8-201ENST00000040584 LIMD2Q9BT23 127 aa12.55□□□□□ -0.4
HOXC8-201ENST00000040584 C1orf195Q5TG92 126 aa12.52□□□□□ -0.41
HOXC8-201ENST00000040584 C8orf87E5RJ46 101 aa12.51□□□□□ -0.41
HOXC8-201ENST00000040584 BRK1Q8WUW1 75 aa12.49□□□□□ -0.41
HOXC8-201ENST00000040584 DMBT1Q9UGM3 2413 aaPredicted RBP12.46□□□□□ -0.42
HOXC8-201ENST00000040584 LOC101927531A0A1B0GV80 90 aa12.44□□□□□ -0.42
HOXC8-201ENST00000040584 PCOTHQ58A44 107 aa12.42□□□□□ -0.42
HOXC8-201ENST00000040584 NOTCH2NLQ7Z3S9 236 aa12.42□□□□□ -0.42
HOXC8-201ENST00000040584 COA5Q86WW8 74 aa12.4□□□□□ -0.42
HOXC8-201ENST00000040584 Q8N9P0 234 aaPredicted RBP12.38□□□□□ -0.43
HOXC8-201ENST00000040584 RETNLBQ9BQ08 111 aa12.38□□□□□ -0.43
HOXC8-201ENST00000040584 PSPHP1O15172 72 aa12.36□□□□□ -0.43
HOXC8-201ENST00000040584 J3QL48 77 aa12.34□□□□□ -0.43
HOXC8-201ENST00000040584 LINC00313P59037 77 aa12.34□□□□□ -0.43
HOXC8-201ENST00000040584 KRTAP13-3Q3SY46 172 aa12.32□□□□□ -0.44
HOXC8-201ENST00000040584 A8MUN3 132 aa12.31□□□□□ -0.44
HOXC8-201ENST00000040584 PCLOQ9Y6V0 5065 aa12.3□□□□□ -0.44
HOXC8-201ENST00000040584 Q5W150 140 aa12.27□□□□□ -0.45
HOXC8-201ENST00000040584 Q5VV11 94 aa12.26□□□□□ -0.45
HOXC8-201ENST00000040584 HRES1P13985 223 aa12.22□□□□□ -0.45
HOXC8-201ENST00000040584 PRR15LQ9BU68 103 aa12.21□□□□□ -0.45
HOXC8-201ENST00000040584 LINC01558Q9Y6Z2 57 aa12.2□□□□□ -0.46
HOXC8-201ENST00000040584 Q75L30 129 aa12.19□□□□□ -0.46
HOXC8-201ENST00000040584 CHKB-CPT1BH3BT56 60 aa12.18□□□□□ -0.46
HOXC8-201ENST00000040584 ACYP2P14621 99 aa12.18□□□□□ -0.46
HOXC8-201ENST00000040584 C9orf92A6NGG3 77 aa12.11□□□□□ -0.47
HOXC8-201ENST00000040584 KRTAP16-1A8MUX0 517 aa12.1□□□□□ -0.47
HOXC8-201ENST00000040584 IGKV2-30P06310 120 aa12.1□□□□□ -0.47
HOXC8-201ENST00000040584 DMAC1Q96GE9 116 aa12.08□□□□□ -0.48
HOXC8-201ENST00000040584 A6NED7 52 aa12.02□□□□□ -0.48
HOXC8-201ENST00000040584 HERC1Q15751 4861 aa11.97□□□□□ -0.49
HOXC8-201ENST00000040584 ATP11AUNQ6ZP68 121 aa11.95□□□□□ -0.5
HOXC8-201ENST00000040584 CDC42SE1Q9NRR8 79 aa11.95□□□□□ -0.5
HOXC8-201ENST00000040584 TPRXLQ17RH7 258 aa11.91□□□□□ -0.5
HOXC8-201ENST00000040584 LCA10Q71F78 164 aa11.91□□□□□ -0.5
HOXC8-201ENST00000040584 C20orf166-AS1Q96NR2 134 aa11.91□□□□□ -0.5
HOXC8-201ENST00000040584 LPAP08519 4548 aa11.9□□□□□ -0.5
HOXC8-201ENST00000040584 A8MUU9 505 aa11.88□□□□□ -0.51
HOXC8-201ENST00000040584 XP32Q5T750 250 aa11.87□□□□□ -0.51
HOXC8-201ENST00000040584 PMAIP1Q13794 54 aa11.87□□□□□ -0.51
HOXC8-201ENST00000040584 IGKV2D-30A0A075B6S6 120 aa11.86□□□□□ -0.51
HOXC8-201ENST00000040584 A8MU10 97 aa11.83□□□□□ -0.52
HOXC8-201ENST00000040584 C7orf65Q6ZTY9 151 aa11.79□□□□□ -0.52
HOXC8-201ENST00000040584 SPINK7P58062 85 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms