RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 A0A1B0GU69 56 aa7.26□□□□□ -1.25
CHPF2-201ENST00000035307 PLAC8Q9NZF1 115 aa7.26□□□□□ -1.25
CHPF2-201ENST00000035307 MMP24-AS1A0A0U1RRL7 71 aa7.25□□□□□ -1.25
CHPF2-201ENST00000035307 SSBP3-AS1Q7Z2R9 100 aa7.25□□□□□ -1.25
CHPF2-201ENST00000035307 LINC00472Q9H8W2 130 aa7.24□□□□□ -1.25
CHPF2-201ENST00000035307 Q8N1X5 172 aa7.24□□□□□ -1.25
CHPF2-201ENST00000035307 LOC101927531A0A1B0GV80 90 aa7.23□□□□□ -1.25
CHPF2-201ENST00000035307 LINC00304Q8N9R0 145 aa7.22□□□□□ -1.25
CHPF2-201ENST00000035307 Q8N9P0 234 aaPredicted RBP7.22□□□□□ -1.25
CHPF2-201ENST00000035307 A0A087X002 238 aa7.19□□□□□ -1.26
CHPF2-201ENST00000035307 NOTCH2NLQ7Z3S9 236 aa7.19□□□□□ -1.26
CHPF2-201ENST00000035307 PRKDCP78527 4128 aaKnown RBP7.19□□□□□ -1.26
CHPF2-201ENST00000035307 C8orf87E5RJ46 101 aa7.18□□□□□ -1.26
CHPF2-201ENST00000035307 KRTAP21-3Q3LHN1 58 aa7.17□□□□□ -1.26
CHPF2-201ENST00000035307 ATP11AUNQ6ZP68 121 aa7.17□□□□□ -1.26
CHPF2-201ENST00000035307 SPRR1BP22528 89 aa7.16□□□□□ -1.26
CHPF2-201ENST00000035307 CD164Q04900 197 aa7.16□□□□□ -1.26
CHPF2-201ENST00000035307 DNAH9Q9NYC9 4486 aa7.14□□□□□ -1.27
CHPF2-201ENST00000035307 HRES1P13985 223 aa7.11□□□□□ -1.27
CHPF2-201ENST00000035307 K7ERS5 55 aa7.1□□□□□ -1.27
CHPF2-201ENST00000035307 PLECQ15149 4684 aaKnown RBP7.09□□□□□ -1.27
CHPF2-201ENST00000035307 SPANXA2-OT1Q8N9U9 137 aa7.08□□□□□ -1.28
CHPF2-201ENST00000035307 DNAH10Q8IVF4 4471 aa7.08□□□□□ -1.28
CHPF2-201ENST00000035307 Q5VSD8 79 aa7.07□□□□□ -1.28
CHPF2-201ENST00000035307 KRTAP29-1A8MX34 341 aaPredicted RBP7.07□□□□□ -1.28
CHPF2-201ENST00000035307 LYSTQ99698 3801 aa7.07□□□□□ -1.28
CHPF2-201ENST00000035307 IGLV7-46A0A075B6I9 117 aa7.06□□□□□ -1.28
CHPF2-201ENST00000035307 CYP4F30PQ9H0H9 118 aa7.06□□□□□ -1.28
CHPF2-201ENST00000035307 J3QL48 77 aa7.05□□□□□ -1.28
CHPF2-201ENST00000035307 Q1T7F1 81 aa7.04□□□□□ -1.28
CHPF2-201ENST00000035307 Q5W150 140 aa7.04□□□□□ -1.28
CHPF2-201ENST00000035307 A8MU10 97 aa7.03□□□□□ -1.28
CHPF2-201ENST00000035307 STARD9Q9P2P6 4700 aa7.01□□□□□ -1.29
CHPF2-201ENST00000035307 ZCCHC13Q8WW36 166 aaKnown RBP6.99□□□□□ -1.29
CHPF2-201ENST00000035307 UQCR11O14957 56 aa6.99□□□□□ -1.29
CHPF2-201ENST00000035307 LINC00483Q53H64 154 aa6.98□□□□□ -1.29
CHPF2-201ENST00000035307 KRTAP13-1Q8IUC0 172 aa6.98□□□□□ -1.29
CHPF2-201ENST00000035307 KRTAP13-2Q52LG2 175 aa6.98□□□□□ -1.29
CHPF2-201ENST00000035307 Q5VV11 94 aa6.98□□□□□ -1.29
CHPF2-201ENST00000035307 MIR22HGQ0VDD5 57 aa6.98□□□□□ -1.29
CHPF2-201ENST00000035307 SPINK7P58062 85 aa6.97□□□□□ -1.29
CHPF2-201ENST00000035307 CMYA5Q8N3K9 4069 aa6.95□□□□□ -1.3
CHPF2-201ENST00000035307 A0A0D9SG42 100 aa6.94□□□□□ -1.3
CHPF2-201ENST00000035307 KMT2AQ03164 3969 aa6.93□□□□□ -1.3
CHPF2-201ENST00000035307 CDC42SE1Q9NRR8 79 aa6.89□□□□□ -1.31
CHPF2-201ENST00000035307 Q6ZSA8 131 aa6.88□□□□□ -1.31
CHPF2-201ENST00000035307 DNAH11Q96DT5 4516 aa6.87□□□□□ -1.31
CHPF2-201ENST00000035307 PRAC1Q96KF2 57 aa6.87□□□□□ -1.31
CHPF2-201ENST00000035307 LINC01558Q9Y6Z2 57 aa6.85□□□□□ -1.31
CHPF2-201ENST00000035307 Q75L30 129 aa6.85□□□□□ -1.31
CHPF2-201ENST00000035307 LINC01554Q52M75 96 aa6.84□□□□□ -1.31
CHPF2-201ENST00000035307 DNAH7Q8WXX0 4024 aa6.84□□□□□ -1.31
CHPF2-201ENST00000035307 DNAH1Q9P2D7 4330 aa6.83□□□□□ -1.32
CHPF2-201ENST00000035307 LCA10Q71F78 164 aa6.82□□□□□ -1.32
CHPF2-201ENST00000035307 KTN1-AS1Q86SY8 53 aa6.82□□□□□ -1.32
CHPF2-201ENST00000035307 KRTAP1-4P0C5Y4 121 aa6.81□□□□□ -1.32
CHPF2-201ENST00000035307 RBM12B-AS1Q9P1G2 102 aa6.8□□□□□ -1.32
CHPF2-201ENST00000035307 CRIPTQ9P021 101 aa6.8□□□□□ -1.32
CHPF2-201ENST00000035307 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
CHPF2-201ENST00000035307 DMAC1Q96GE9 116 aa6.76□□□□□ -1.33
CHPF2-201ENST00000035307 DNAH3Q8TD57 4116 aa6.75□□□□□ -1.33
CHPF2-201ENST00000035307 A0A1B0GU33 70 aa6.75□□□□□ -1.33
CHPF2-201ENST00000035307 FAT1Q14517 4588 aa6.74□□□□□ -1.33
CHPF2-201ENST00000035307 A0A1B0GVY2 172 aa6.74□□□□□ -1.33
CHPF2-201ENST00000035307 COX6B2Q6YFQ2 88 aa6.74□□□□□ -1.33
CHPF2-201ENST00000035307 DNAH5Q8TE73 4624 aa6.71□□□□□ -1.33
CHPF2-201ENST00000035307 A6NN06 94 aa6.71□□□□□ -1.34
CHPF2-201ENST00000035307 VPS13DQ5THJ4 4388 aa6.69□□□□□ -1.34
CHPF2-201ENST00000035307 SPATA8Q6RVD6 105 aa6.68□□□□□ -1.34
CHPF2-201ENST00000035307 HYDINQ4G0P3 5121 aa6.66□□□□□ -1.34
CHPF2-201ENST00000035307 ADM2Q7Z4H4 148 aa6.62□□□□□ -1.35
CHPF2-201ENST00000035307 ASB16-AS1Q495Z4 193 aa6.61□□□□□ -1.35
CHPF2-201ENST00000035307 CSAG1Q6PB30 78 aa6.61□□□□□ -1.35
CHPF2-201ENST00000035307 KIAA1109Q2LD37 5005 aa6.61□□□□□ -1.35
CHPF2-201ENST00000035307 DNAH6Q9C0G6 4158 aa6.61□□□□□ -1.35
CHPF2-201ENST00000035307 LRP1BQ9NZR2 4599 aa6.61□□□□□ -1.35
CHPF2-201ENST00000035307 KMT2CQ8NEZ4 4911 aaKnown RBP6.59□□□□□ -1.35
CHPF2-201ENST00000035307 DNAH8Q96JB1 4490 aa6.59□□□□□ -1.35
CHPF2-201ENST00000035307 S4R3F8 94 aa6.57□□□□□ -1.36
CHPF2-201ENST00000035307 DNAH2Q9P225 4427 aa6.57□□□□□ -1.36
CHPF2-201ENST00000035307 DYNC1H1Q14204 4646 aaKnown RBP6.56□□□□□ -1.36
CHPF2-201ENST00000035307 KRTAP4-5Q9BYR2 181 aa6.55□□□□□ -1.36
CHPF2-201ENST00000035307 PKHD1P08F94 4074 aa6.53□□□□□ -1.36
CHPF2-201ENST00000035307 FRAS1Q86XX4 4008 aa6.51□□□□□ -1.37
CHPF2-201ENST00000035307 DYNC2H1Q8NCM8 4307 aaKnown RBP6.5□□□□□ -1.37
CHPF2-201ENST00000035307 H1FX-AS1Q4G0G2 97 aa6.49□□□□□ -1.37
CHPF2-201ENST00000035307 DNAH17Q9UFH2 4485 aa6.49□□□□□ -1.37
CHPF2-201ENST00000035307 RYR1P21817 5038 aa6.48□□□□□ -1.37
CHPF2-201ENST00000035307 RYR3Q15413 4870 aa6.47□□□□□ -1.37
CHPF2-201ENST00000035307 SACSQ9NZJ4 4579 aa6.47□□□□□ -1.37
CHPF2-201ENST00000035307 MYCBP2O75592 4640 aa6.47□□□□□ -1.37
CHPF2-201ENST00000035307 KRTAP16-1A8MUX0 517 aa6.47□□□□□ -1.37
CHPF2-201ENST00000035307 VPS13BQ7Z7G8 4022 aa6.45□□□□□ -1.38
CHPF2-201ENST00000035307 R4GN34 69 aa6.41□□□□□ -1.38
CHPF2-201ENST00000035307 HECTD4Q9Y4D8 3996 aa6.41□□□□□ -1.38
CHPF2-201ENST00000035307 LRP1Q07954 4544 aaKnown RBP6.41□□□□□ -1.38
CHPF2-201ENST00000035307 A8MUU9 505 aa6.41□□□□□ -1.38
CHPF2-201ENST00000035307 KRTAP10-8P60410 259 aa6.41□□□□□ -1.38
CHPF2-201ENST00000035307 FAT3Q8TDW7 4589 aa6.41□□□□□ -1.38
CHPF2-201ENST00000035307 H3BS24 57 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms