RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Usmg5Q78IK2 58 aa11.35□□□□□ -0.59
Nup88-202ENSMUST00000108530 Nudt3Q9JI46 168 aa11.35□□□□□ -0.59
Nup88-202ENSMUST00000108530 Trav16A0A075B653 116 aa11.35□□□□□ -0.59
Nup88-202ENSMUST00000108530 Tcte2E9PY37 120 aa11.35□□□□□ -0.59
Nup88-202ENSMUST00000108530 Lgals1P16045 135 aaKnown RBP11.35□□□□□ -0.59
Nup88-202ENSMUST00000108530 Pde6hP61249 83 aa11.35□□□□□ -0.59
Nup88-202ENSMUST00000108530 Chchd1Q9CQA6 118 aa11.35□□□□□ -0.59
Nup88-202ENSMUST00000108530 Chd6A3KFM7 2711 aa11.35□□□□□ -0.59
Nup88-202ENSMUST00000108530 Igkv4-59A0A0B4J1I8 117 aa11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 Rtl10D3YWW5 146 aa11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 CtsgP28293 261 aa11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 Rpl19P84099 196 aaKnown RBP11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 Gm10188Q3V432 135 aa11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 Pygo2Q80V76 405 aa11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 Gm5868Q8BJG1 145 aa11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 Trpt1Q8K3A2 249 aa11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 Shisa9Q9CZN4 424 aa11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 Tcrg-C2A0A075B5Z2 167 aa11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 Trdv1A0A075B657 112 aa11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 Ms4a12A0A087WSB9 263 aa11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 1500009C09RikD3YYW9 81 aa11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 P01853 167 aa11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 Megf10Q6DIB5 1147 aa11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 Urm1Q9D2P4 101 aa11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 Fxyd4Q9D2W0 88 aa11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 SelenokQ9JLJ1 94 aa11.34□□□□□ -0.59
Nup88-202ENSMUST00000108530 Gm10130F6ZHM5 101 aa11.33□□□□□ -0.6
Nup88-202ENSMUST00000108530 Tmem88bQ3TYP4 173 aa11.33□□□□□ -0.6
Nup88-202ENSMUST00000108530 Olfr745Q7TRL9 328 aa11.33□□□□□ -0.6
Nup88-202ENSMUST00000108530 Trav7n-4A0A075B620 113 aa11.33□□□□□ -0.6
Nup88-202ENSMUST00000108530 Ang3P97802 145 aa11.33□□□□□ -0.6
Nup88-202ENSMUST00000108530 MymxQ2Q5T5 84 aa11.33□□□□□ -0.6
Nup88-202ENSMUST00000108530 Fbln7Q501P1 440 aa11.33□□□□□ -0.6
Nup88-202ENSMUST00000108530 Tnfsf15Q5UBV8 252 aa11.33□□□□□ -0.6
Nup88-202ENSMUST00000108530 Ifna11Q61716 190 aa11.33□□□□□ -0.6
Nup88-202ENSMUST00000108530 Immp2lQ8BPT6 175 aa11.33□□□□□ -0.6
Nup88-202ENSMUST00000108530 Nrn1Q8CFV4 142 aa11.33□□□□□ -0.6
Nup88-202ENSMUST00000108530 Chchd5Q9CQP3 110 aa11.33□□□□□ -0.6
Nup88-202ENSMUST00000108530 Rchy1Q9CR50 261 aa11.33□□□□□ -0.6
Nup88-202ENSMUST00000108530 Spata25Q9DA57 226 aa11.33□□□□□ -0.6
Nup88-202ENSMUST00000108530 Zfp462B1AWL2 2495 aaKnown RBP11.32□□□□□ -0.6
Nup88-202ENSMUST00000108530 AsipQ03288 131 aa11.32□□□□□ -0.6
Nup88-202ENSMUST00000108530 Srsf12Q8C8K3 266 aa11.32□□□□□ -0.6
Nup88-202ENSMUST00000108530 Olfr982Q8VGB3 321 aa11.32□□□□□ -0.6
Nup88-202ENSMUST00000108530 Tnfrsf13cQ9D8D0 175 aa11.32□□□□□ -0.6
Nup88-202ENSMUST00000108530 Ccl24Q9JKC0 119 aa11.32□□□□□ -0.6
Nup88-202ENSMUST00000108530 Tcrg-V4A0A0B4J1J8 138 aa11.32□□□□□ -0.6
Nup88-202ENSMUST00000108530 A130051J06RikQ8CAU1 227 aa11.32□□□□□ -0.6
Nup88-202ENSMUST00000108530 Dazap1Q9JII5 406 aaKnown RBP11.32□□□□□ -0.6
Nup88-202ENSMUST00000108530 Trav12d-3A0A075B6A4 115 aa11.31□□□□□ -0.6
Nup88-202ENSMUST00000108530 KprpB2RUR4 657 aa11.31□□□□□ -0.6
Nup88-202ENSMUST00000108530 Zcwpw2Q08EN7 125 aa11.31□□□□□ -0.6
Nup88-202ENSMUST00000108530 RprmlQ3URD2 117 aa11.31□□□□□ -0.6
Nup88-202ENSMUST00000108530 Tmem91Q8C581 172 aa11.31□□□□□ -0.6
Nup88-202ENSMUST00000108530 Trav14n-3A0A075B645 120 aa11.31□□□□□ -0.6
Nup88-202ENSMUST00000108530 Gp9O88186 177 aa11.31□□□□□ -0.6
Nup88-202ENSMUST00000108530 Gm10842Q3U587 122 aa11.31□□□□□ -0.6
Nup88-202ENSMUST00000108530 Olfr553Q7TRS6 326 aa11.31□□□□□ -0.6
Nup88-202ENSMUST00000108530 Spink2Q8BMY7 86 aa11.31□□□□□ -0.6
Nup88-202ENSMUST00000108530 Ifi27Q8C6G0 260 aa11.31□□□□□ -0.6
Nup88-202ENSMUST00000108530 Olfr1199Q8VF94 310 aa11.31□□□□□ -0.6
Nup88-202ENSMUST00000108530 SNORCQ9CXL7 121 aa11.31□□□□□ -0.6
Nup88-202ENSMUST00000108530 GlmpQ9JHJ3 404 aa11.31□□□□□ -0.6
Nup88-202ENSMUST00000108530 Trav6-4A0A075B6B4 115 aa11.3□□□□□ -0.6
Nup88-202ENSMUST00000108530 Tmem262D3Z338 116 aa11.3□□□□□ -0.6
Nup88-202ENSMUST00000108530 Olfr1116E9PXB8 307 aa11.3□□□□□ -0.6
Nup88-202ENSMUST00000108530 Fbxl7Q5BJ29 491 aa11.3□□□□□ -0.6
Nup88-202ENSMUST00000108530 Olfr1381Q7TQT4 311 aa11.3□□□□□ -0.6
Nup88-202ENSMUST00000108530 Olfr1380Q7TQT5 311 aa11.3□□□□□ -0.6
Nup88-202ENSMUST00000108530 Tmem89Q9DA04 169 aa11.3□□□□□ -0.6
Nup88-202ENSMUST00000108530 Tomm40Q9QYA2 361 aa11.3□□□□□ -0.6
Nup88-202ENSMUST00000108530 Olfr1293-psA0A1L1SVB5 326 aa11.3□□□□□ -0.6
Nup88-202ENSMUST00000108530 Gm10553J3QPF1 123 aa11.3□□□□□ -0.6
Nup88-202ENSMUST00000108530 Pmp2P24526 132 aa11.3□□□□□ -0.6
Nup88-202ENSMUST00000108530 Tdgf1P51865 171 aa11.3□□□□□ -0.6
Nup88-202ENSMUST00000108530 Gm5105Q8C6Y9 112 aa11.3□□□□□ -0.6
Nup88-202ENSMUST00000108530 Wnk1P83741 2377 aa11.29□□□□□ -0.6
Nup88-202ENSMUST00000108530 Gm4565A0A140LJ87 301 aa11.29□□□□□ -0.6
Nup88-202ENSMUST00000108530 Gm6176J3QK59 301 aa11.29□□□□□ -0.6
Nup88-202ENSMUST00000108530 Gm4567Q3UTA8 301 aa11.29□□□□□ -0.6
Nup88-202ENSMUST00000108530 SriQ6P069 198 aa11.29□□□□□ -0.6
Nup88-202ENSMUST00000108530 Rpl11Q9CXW4 178 aaKnown RBP11.29□□□□□ -0.6
Nup88-202ENSMUST00000108530 Helz2E9QAM5 2947 aaKnown RBP11.29□□□□□ -0.6
Nup88-202ENSMUST00000108530 Ighv1-80A0A075B5Y3 117 aa11.28□□□□□ -0.6
Nup88-202ENSMUST00000108530 Ccdc71lE9Q4T4 218 aa11.28□□□□□ -0.6
Nup88-202ENSMUST00000108530 Gm9964E9Q9S5 144 aa11.28□□□□□ -0.6
Nup88-202ENSMUST00000108530 Gm5941Q497P9 117 aa11.28□□□□□ -0.6
Nup88-202ENSMUST00000108530 Olfr1419Q7TQS2 343 aa11.28□□□□□ -0.6
Nup88-202ENSMUST00000108530 Npc2Q9Z0J0 149 aa11.28□□□□□ -0.6
Nup88-202ENSMUST00000108530 Igkv4-57-1A0A075B5M4 119 aa11.28□□□□□ -0.6
Nup88-202ENSMUST00000108530 Igkv4-71A0A0G2JEH0 117 aa11.28□□□□□ -0.6
Nup88-202ENSMUST00000108530 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP11.28□□□□□ -0.6
Nup88-202ENSMUST00000108530 Plcxd2B2RXA1 340 aa11.28□□□□□ -0.6
Nup88-202ENSMUST00000108530 Vmn1r149E9PWL6 307 aa11.28□□□□□ -0.6
Nup88-202ENSMUST00000108530 Vmn1r101E9Q365 307 aa11.28□□□□□ -0.6
Nup88-202ENSMUST00000108530 Vmn1r158G3UY92 307 aa11.28□□□□□ -0.6
Nup88-202ENSMUST00000108530 Odf3l1Q810P2 275 aa11.28□□□□□ -0.6
Nup88-202ENSMUST00000108530 Zmat4Q8BZ94 229 aa11.28□□□□□ -0.6
Nup88-202ENSMUST00000108530 Tmed6Q9CQG0 239 aa11.28□□□□□ -0.6
Nup88-202ENSMUST00000108530 Fam103a1Q9CQY2 119 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms