RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 EPM2AB3EWF7 344 aa6.41□□□□□ -1.38
PHGDH-224ENST00000641711 Q8N377 158 aa6.41□□□□□ -1.38
PHGDH-224ENST00000641711 CIRBP-AS1Q8TBR5 109 aa6.41□□□□□ -1.38
PHGDH-224ENST00000641711 ANAPC13Q9BS18 74 aa6.41□□□□□ -1.38
PHGDH-224ENST00000641711 UBL5Q9BZL1 73 aa6.41□□□□□ -1.38
PHGDH-224ENST00000641711 IGKV2-24A0A0C4DH68 120 aa6.4□□□□□ -1.38
PHGDH-224ENST00000641711 Q8N1X5 172 aa6.4□□□□□ -1.38
PHGDH-224ENST00000641711 PANO1I0J062 215 aa6.39□□□□□ -1.39
PHGDH-224ENST00000641711 CHTF8P0CG12 524 aa6.39□□□□□ -1.39
PHGDH-224ENST00000641711 HIST1H4AP62805 103 aaKnown RBP6.39□□□□□ -1.39
PHGDH-224ENST00000641711 DNAH8Q96JB1 4490 aa6.38□□□□□ -1.39
PHGDH-224ENST00000641711 APOBP04114 4563 aaKnown RBP6.38□□□□□ -1.39
PHGDH-224ENST00000641711 IGKV3D-7A0A0C4DH55 119 aa6.38□□□□□ -1.39
PHGDH-224ENST00000641711 FAM236AA0A1B0GUQ0 79 aa6.37□□□□□ -1.39
PHGDH-224ENST00000641711 FAM236BA0A1B0GV22 79 aa6.37□□□□□ -1.39
PHGDH-224ENST00000641711 A0A1B0GW54 56 aa6.37□□□□□ -1.39
PHGDH-224ENST00000641711 H0Y9J4 135 aa6.37□□□□□ -1.39
PHGDH-224ENST00000641711 FAM229AH3BQW9 127 aa6.37□□□□□ -1.39
PHGDH-224ENST00000641711 DPH3Q96FX2 82 aa6.37□□□□□ -1.39
PHGDH-224ENST00000641711 KIAA1109Q2LD37 5005 aa6.37□□□□□ -1.39
PHGDH-224ENST00000641711 RYR1P21817 5038 aa6.36□□□□□ -1.39
PHGDH-224ENST00000641711 ERC2-IT1O76042 136 aa6.36□□□□□ -1.39
PHGDH-224ENST00000641711 PLA2G1BP04054 148 aaKnown RBP6.36□□□□□ -1.39
PHGDH-224ENST00000641711 UBE2BP63146 152 aa6.36□□□□□ -1.39
PHGDH-224ENST00000641711 Q6ZVQ6 151 aa6.36□□□□□ -1.39
PHGDH-224ENST00000641711 DEFB105AQ8NG35 78 aa6.36□□□□□ -1.39
PHGDH-224ENST00000641711 ST20-AS1Q8NBB2 130 aa6.35□□□□□ -1.39
PHGDH-224ENST00000641711 HSPG2P98160 4391 aa6.34□□□□□ -1.39
PHGDH-224ENST00000641711 CXCL6P80162 114 aa6.34□□□□□ -1.39
PHGDH-224ENST00000641711 PHF5AQ7RTV0 110 aaKnown RBP6.34□□□□□ -1.39
PHGDH-224ENST00000641711 HAMPP81172 84 aa6.33□□□□□ -1.4
PHGDH-224ENST00000641711 Q5VSD8 79 aa6.33□□□□□ -1.4
PHGDH-224ENST00000641711 FAM19A1Q7Z5A9 133 aa6.33□□□□□ -1.4
PHGDH-224ENST00000641711 ATOX1O00244 68 aa6.32□□□□□ -1.4
PHGDH-224ENST00000641711 SMIM29Q86T20 159 aa6.32□□□□□ -1.4
PHGDH-224ENST00000641711 KRTAP11-1Q8IUC1 163 aa6.32□□□□□ -1.4
PHGDH-224ENST00000641711 HERC2O95714 4834 aa6.31□□□□□ -1.4
PHGDH-224ENST00000641711 SMR3BP02814 79 aaPredicted RBP6.31□□□□□ -1.4
PHGDH-224ENST00000641711 RPL37AP61513 92 aaKnown RBP6.31□□□□□ -1.4
PHGDH-224ENST00000641711 PRLHP81277 87 aa6.31□□□□□ -1.4
PHGDH-224ENST00000641711 IGLV8-61A0A075B6I0 122 aa6.3□□□□□ -1.4
PHGDH-224ENST00000641711 SPRR1BP22528 89 aa6.3□□□□□ -1.4
PHGDH-224ENST00000641711 C1orf137Q5JT78 98 aa6.3□□□□□ -1.4
PHGDH-224ENST00000641711 C3orf22Q8N5N4 141 aa6.3□□□□□ -1.4
PHGDH-224ENST00000641711 Q8NBF4 154 aa6.3□□□□□ -1.4
PHGDH-224ENST00000641711 A0A087WVE0 104 aa6.29□□□□□ -1.4
PHGDH-224ENST00000641711 A0A1W2PNM2 257 aa6.29□□□□□ -1.4
PHGDH-224ENST00000641711 BCE1O60756 84 aa6.29□□□□□ -1.4
PHGDH-224ENST00000641711 KRTAP13-1Q8IUC0 172 aa6.29□□□□□ -1.4
PHGDH-224ENST00000641711 SPRR4Q96PI1 79 aa6.29□□□□□ -1.4
PHGDH-224ENST00000641711 CCDC179H3BU77 68 aa6.28□□□□□ -1.4
PHGDH-224ENST00000641711 F8WEM9 126 aa6.27□□□□□ -1.41
PHGDH-224ENST00000641711 KRTAP10-4P60372 401 aaPredicted RBP6.27□□□□□ -1.41
PHGDH-224ENST00000641711 NREPQ16612 68 aa6.27□□□□□ -1.41
PHGDH-224ENST00000641711 HIGD2AQ9BW72 106 aa6.27□□□□□ -1.41
PHGDH-224ENST00000641711 VPS13BQ7Z7G8 4022 aa6.27□□□□□ -1.41
PHGDH-224ENST00000641711 UQCRQO14949 82 aa6.26□□□□□ -1.41
PHGDH-224ENST00000641711 COX7CP15954 63 aa6.26□□□□□ -1.41
PHGDH-224ENST00000641711 UBE2AP49459 152 aa6.26□□□□□ -1.41
PHGDH-224ENST00000641711 SRRM2Q9UQ35 2752 aaKnown RBP6.26□□□□□ -1.41
PHGDH-224ENST00000641711 FLG2Q5D862 2391 aaPredicted RBP6.25□□□□□ -1.41
PHGDH-224ENST00000641711 CRYGAP11844 174 aa6.25□□□□□ -1.41
PHGDH-224ENST00000641711 KRTAP17-1Q9BYP8 105 aa6.25□□□□□ -1.41
PHGDH-224ENST00000641711 SERP2Q8N6R1 65 aa6.24□□□□□ -1.41
PHGDH-224ENST00000641711 PSORS1C2Q9UIG4 136 aa6.24□□□□□ -1.41
PHGDH-224ENST00000641711 IGFL1Q6UW32 110 aa6.23□□□□□ -1.41
PHGDH-224ENST00000641711 FAT1Q14517 4588 aa6.23□□□□□ -1.41
PHGDH-224ENST00000641711 BPY2O14599 106 aa6.22□□□□□ -1.41
PHGDH-224ENST00000641711 KRTAP4-5Q9BYR2 181 aa6.22□□□□□ -1.41
PHGDH-224ENST00000641711 SPINK6Q6UWN8 80 aa6.21□□□□□ -1.42
PHGDH-224ENST00000641711 IGLV7-43P04211 117 aa6.2□□□□□ -1.42
PHGDH-224ENST00000641711 SMIM20Q8N5G0 67 aa6.2□□□□□ -1.42
PHGDH-224ENST00000641711 IGKV4-1P06312 121 aa6.19□□□□□ -1.42
PHGDH-224ENST00000641711 LINC00483Q53H64 154 aa6.19□□□□□ -1.42
PHGDH-224ENST00000641711 C9orf153Q5TBE3 101 aa6.19□□□□□ -1.42
PHGDH-224ENST00000641711 TRAV7A0A075B6U4 112 aa6.18□□□□□ -1.42
PHGDH-224ENST00000641711 ZNF706Q9Y5V0 76 aaPredicted RBP6.18□□□□□ -1.42
PHGDH-224ENST00000641711 DMBT1Q9UGM3 2413 aaPredicted RBP6.17□□□□□ -1.42
PHGDH-224ENST00000641711 ZNF861PO60384 105 aa6.17□□□□□ -1.42
PHGDH-224ENST00000641711 OXTP01178 125 aa6.16□□□□□ -1.42
PHGDH-224ENST00000641711 A0A0G2JQZ4 141 aa6.15□□□□□ -1.42
PHGDH-224ENST00000641711 DSCR10P59022 87 aa6.15□□□□□ -1.42
PHGDH-224ENST00000641711 KRTAP29-1A8MX34 341 aaPredicted RBP6.14□□□□□ -1.43
PHGDH-224ENST00000641711 Q8N9L7 120 aa6.14□□□□□ -1.43
PHGDH-224ENST00000641711 A0A087WSZ3 146 aa6.13□□□□□ -1.43
PHGDH-224ENST00000641711 PKHD1L1Q86WI1 4243 aa6.13□□□□□ -1.43
PHGDH-224ENST00000641711 ABCA13Q86UQ4 5058 aa6.1□□□□□ -1.43
PHGDH-224ENST00000641711 LINC00472Q9H8W2 130 aa6.1□□□□□ -1.43
PHGDH-224ENST00000641711 SS18L2Q9UHA2 77 aa6.1□□□□□ -1.43
PHGDH-224ENST00000641711 K7EQZ3 153 aa6.09□□□□□ -1.43
PHGDH-224ENST00000641711 OCR1Q9BZK8 76 aa6.09□□□□□ -1.43
PHGDH-224ENST00000641711 MYCBP2O75592 4640 aa6.08□□□□□ -1.44
PHGDH-224ENST00000641711 CYSTM1Q9H1C7 97 aa6.08□□□□□ -1.44
PHGDH-224ENST00000641711 TMEM258P61165 79 aa6.07□□□□□ -1.44
PHGDH-224ENST00000641711 KLKP1Q107X0 134 aa6.07□□□□□ -1.44
PHGDH-224ENST00000641711 FAM229BQ4G0N7 80 aa6.07□□□□□ -1.44
PHGDH-224ENST00000641711 IGLV9-49A0A0B4J1Y8 123 aa6.06□□□□□ -1.44
PHGDH-224ENST00000641711 J3KT08 172 aa6.06□□□□□ -1.44
PHGDH-224ENST00000641711 KRTAP1-4P0C5Y4 121 aa6.06□□□□□ -1.44
PHGDH-224ENST00000641711 C20orf197Q8N268 126 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms