RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 SMCR5Q8TEV8 140 aa5.92□□□□□ -1.46
PHGDH-222ENST00000641587 A0A1B0GV90 55 aa5.91□□□□□ -1.46
PHGDH-222ENST00000641587 A0A1B0GX51 115 aa5.91□□□□□ -1.46
PHGDH-222ENST00000641587 K7EP34 96 aa5.91□□□□□ -1.46
PHGDH-222ENST00000641587 Q6ZQY7 126 aa5.91□□□□□ -1.46
PHGDH-222ENST00000641587 ERC2-IT1O76042 136 aa5.9□□□□□ -1.46
PHGDH-222ENST00000641587 TRACP01848 142 aa5.9□□□□□ -1.46
PHGDH-222ENST00000641587 GTF2H5Q6ZYL4 71 aa5.9□□□□□ -1.46
PHGDH-222ENST00000641587 H3BMG7 143 aa5.89□□□□□ -1.47
PHGDH-222ENST00000641587 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.89□□□□□ -1.47
PHGDH-222ENST00000641587 ST20-AS1Q8NBB2 130 aa5.89□□□□□ -1.47
PHGDH-222ENST00000641587 DEFB105AQ8NG35 78 aa5.89□□□□□ -1.47
PHGDH-222ENST00000641587 A0A087X002 238 aa5.88□□□□□ -1.47
PHGDH-222ENST00000641587 C9JAW5 83 aa5.88□□□□□ -1.47
PHGDH-222ENST00000641587 ORMDL1Q9P0S3 153 aa5.88□□□□□ -1.47
PHGDH-222ENST00000641587 ZNF706Q9Y5V0 76 aaPredicted RBP5.88□□□□□ -1.47
PHGDH-222ENST00000641587 GAGE2AQ6NT46 116 aa5.87□□□□□ -1.47
PHGDH-222ENST00000641587 MTURNQ8N3F0 131 aa5.87□□□□□ -1.47
PHGDH-222ENST00000641587 GHRHP01286 108 aa5.86□□□□□ -1.47
PHGDH-222ENST00000641587 OCIAD2Q56VL3 154 aa5.86□□□□□ -1.47
PHGDH-222ENST00000641587 RETNLBQ9BQ08 111 aa5.86□□□□□ -1.47
PHGDH-222ENST00000641587 BAALC-AS2P0C853 105 aa5.85□□□□□ -1.47
PHGDH-222ENST00000641587 SPRR4Q96PI1 79 aa5.85□□□□□ -1.47
PHGDH-222ENST00000641587 TEX49A0A1B0GTD5 131 aa5.84□□□□□ -1.47
PHGDH-222ENST00000641587 ANAPC11Q9NYG5 84 aa5.84□□□□□ -1.47
PHGDH-222ENST00000641587 IGLV5-48A0A075B6I7 105 aa5.83□□□□□ -1.48
PHGDH-222ENST00000641587 H3BQ85 93 aa5.83□□□□□ -1.48
PHGDH-222ENST00000641587 TYMSOSQ8TAI1 123 aa5.83□□□□□ -1.48
PHGDH-222ENST00000641587 A0A1B0GV72 72 aa5.82□□□□□ -1.48
PHGDH-222ENST00000641587 F8WEM9 126 aa5.82□□□□□ -1.48
PHGDH-222ENST00000641587 H3BT86 120 aa5.82□□□□□ -1.48
PHGDH-222ENST00000641587 TMEM256-PLSCR3K7ERE1 68 aa5.82□□□□□ -1.48
PHGDH-222ENST00000641587 LINC01547P58512 204 aaPredicted RBP5.82□□□□□ -1.48
PHGDH-222ENST00000641587 UBE2V1Q13404 147 aa5.82□□□□□ -1.48
PHGDH-222ENST00000641587 Q8N377 158 aa5.82□□□□□ -1.48
PHGDH-222ENST00000641587 PPDPFLQ8WWR9 84 aa5.82□□□□□ -1.48
PHGDH-222ENST00000641587 LAMTOR3Q9UHA4 124 aa5.82□□□□□ -1.48
PHGDH-222ENST00000641587 KRTAP13-2Q52LG2 175 aa5.81□□□□□ -1.48
PHGDH-222ENST00000641587 C3orf22Q8N5N4 141 aa5.81□□□□□ -1.48
PHGDH-222ENST00000641587 CRYGAP11844 174 aa5.8□□□□□ -1.48
PHGDH-222ENST00000641587 SPRR1BP22528 89 aa5.8□□□□□ -1.48
PHGDH-222ENST00000641587 LINC00483Q53H64 154 aa5.8□□□□□ -1.48
PHGDH-222ENST00000641587 ANKRD29Q8N6D5 301 aa5.8□□□□□ -1.48
PHGDH-222ENST00000641587 IGLV9-49A0A0B4J1Y8 123 aa5.79□□□□□ -1.48
PHGDH-222ENST00000641587 F8W1H4 67 aa5.79□□□□□ -1.48
PHGDH-222ENST00000641587 NDUFV3P56181 108 aaKnown RBP5.79□□□□□ -1.48
PHGDH-222ENST00000641587 C9orf153Q5TBE3 101 aa5.79□□□□□ -1.48
PHGDH-222ENST00000641587 CDIP1Q9H305 208 aa5.79□□□□□ -1.48
PHGDH-222ENST00000641587 PRO0461Q9UI25 63 aa5.79□□□□□ -1.48
PHGDH-222ENST00000641587 SMCPP49901 116 aaPredicted RBP5.78□□□□□ -1.48
PHGDH-222ENST00000641587 MOBPQ13875 183 aa5.77□□□□□ -1.49
PHGDH-222ENST00000641587 TPRXLQ17RH7 258 aa5.77□□□□□ -1.49
PHGDH-222ENST00000641587 FAM229BQ4G0N7 80 aa5.77□□□□□ -1.49
PHGDH-222ENST00000641587 SMIM29Q86T20 159 aa5.77□□□□□ -1.49
PHGDH-222ENST00000641587 LINC00304Q8N9R0 145 aa5.76□□□□□ -1.49
PHGDH-222ENST00000641587 IGLV7-46A0A075B6I9 117 aa5.75□□□□□ -1.49
PHGDH-222ENST00000641587 Q8NBF4 154 aa5.75□□□□□ -1.49
PHGDH-222ENST00000641587 JMJD7-PLA2G4BH0Y9G9 81 aa5.74□□□□□ -1.49
PHGDH-222ENST00000641587 RBM3P98179 157 aaKnown RBP5.74□□□□□ -1.49
PHGDH-222ENST00000641587 ETDBQ3ZM63 59 aa5.73□□□□□ -1.49
PHGDH-222ENST00000641587 TEN1Q86WV5 123 aa5.73□□□□□ -1.49
PHGDH-222ENST00000641587 DSCR8Q96T75 97 aa5.73□□□□□ -1.49
PHGDH-222ENST00000641587 C14orf132Q9NPU4 83 aa5.73□□□□□ -1.49
PHGDH-222ENST00000641587 Q6JHZ5 121 aa5.72□□□□□ -1.49
PHGDH-222ENST00000641587 IGLV8-61A0A075B6I0 122 aa5.71□□□□□ -1.5
PHGDH-222ENST00000641587 A0A0G2JQZ4 141 aa5.71□□□□□ -1.5
PHGDH-222ENST00000641587 VPS25Q9BRG1 176 aa5.71□□□□□ -1.5
PHGDH-222ENST00000641587 IGFL1Q6UW32 110 aa5.7□□□□□ -1.5
PHGDH-222ENST00000641587 SSBP3-AS1Q7Z2R9 100 aa5.7□□□□□ -1.5
PHGDH-222ENST00000641587 OBSCN-AS1Q96MR7 158 aa5.7□□□□□ -1.5
PHGDH-222ENST00000641587 KRTAP4-1Q9BYQ7 146 aa5.7□□□□□ -1.5
PHGDH-222ENST00000641587 FSIP2Q5CZC0 6907 aa5.69□□□□□ -1.5
PHGDH-222ENST00000641587 HRCT1Q6UXD1 115 aa5.69□□□□□ -1.5
PHGDH-222ENST00000641587 LOC110117498A0A087WWA1 95 aa5.68□□□□□ -1.5
PHGDH-222ENST00000641587 TRBV7-4A0A0J9YYF1 115 aa5.68□□□□□ -1.5
PHGDH-222ENST00000641587 CCKP06307 115 aa5.68□□□□□ -1.5
PHGDH-222ENST00000641587 PDE6GP18545 87 aa5.68□□□□□ -1.5
PHGDH-222ENST00000641587 LCE2DQ5TA82 110 aaPredicted RBP5.68□□□□□ -1.5
PHGDH-222ENST00000641587 CRCT1Q9UGL9 99 aa5.68□□□□□ -1.5
PHGDH-222ENST00000641587 C4orf48Q5BLP8 95 aa5.67□□□□□ -1.5
PHGDH-222ENST00000641587 Q6ZQT0 140 aa5.67□□□□□ -1.5
PHGDH-222ENST00000641587 A0A1W2PNM2 257 aa5.65□□□□□ -1.5
PHGDH-222ENST00000641587 C21orf62-AS1Q17RA5 79 aa5.65□□□□□ -1.5
PHGDH-222ENST00000641587 KRTAP13-3Q3SY46 172 aa5.65□□□□□ -1.5
PHGDH-222ENST00000641587 ASB16-AS1Q495Z4 193 aa5.64□□□□□ -1.51
PHGDH-222ENST00000641587 TRBV7-7A0A0K0K1E9 115 aa5.62□□□□□ -1.51
PHGDH-222ENST00000641587 CD164Q04900 197 aa5.62□□□□□ -1.51
PHGDH-222ENST00000641587 SPAG11AQ6PDA7 123 aa5.62□□□□□ -1.51
PHGDH-222ENST00000641587 A0A087WSZ3 146 aa5.61□□□□□ -1.51
PHGDH-222ENST00000641587 J3QR89 54 aa5.61□□□□□ -1.51
PHGDH-222ENST00000641587 Q6Q795 121 aa5.61□□□□□ -1.51
PHGDH-222ENST00000641587 FP248Q71RG6 208 aaPredicted RBP5.61□□□□□ -1.51
PHGDH-222ENST00000641587 SPINK1P00995 79 aa5.6□□□□□ -1.51
PHGDH-222ENST00000641587 LIMD2Q9BT23 127 aa5.59□□□□□ -1.51
PHGDH-222ENST00000641587 SS18L2Q9UHA2 77 aa5.59□□□□□ -1.51
PHGDH-222ENST00000641587 LCE2CQ5TA81 110 aa5.58□□□□□ -1.52
PHGDH-222ENST00000641587 A0A1B0GW54 56 aa5.57□□□□□ -1.52
PHGDH-222ENST00000641587 K7ERU9 68 aa5.57□□□□□ -1.52
PHGDH-222ENST00000641587 SEC61BP60468 96 aaKnown RBP5.57□□□□□ -1.52
PHGDH-222ENST00000641587 ACYP1P07311 99 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms