RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 Q8NDZ9 215 aa3.66□□□□□ -1.82
SCARB2-218ENST00000639715 SPEGQ15772 3267 aa3.66□□□□□ -1.82
SCARB2-218ENST00000639715 FLNCQ14315 2725 aa3.66□□□□□ -1.82
SCARB2-218ENST00000639715 IGLV1-50A0A075B6I6 118 aa3.66□□□□□ -1.82
SCARB2-218ENST00000639715 MIR22HGQ0VDD5 57 aa3.66□□□□□ -1.82
SCARB2-218ENST00000639715 TEX15Q9BXT5 2789 aa3.66□□□□□ -1.82
SCARB2-218ENST00000639715 KALRNO60229 2985 aa3.65□□□□□ -1.82
SCARB2-218ENST00000639715 PRLHP81277 87 aa3.65□□□□□ -1.82
SCARB2-218ENST00000639715 LRBAP50851 2863 aa3.65□□□□□ -1.82
SCARB2-218ENST00000639715 IGLV7-46A0A075B6I9 117 aa3.65□□□□□ -1.83
SCARB2-218ENST00000639715 UQCR11O14957 56 aa3.65□□□□□ -1.83
SCARB2-218ENST00000639715 PLA2G1BP04054 148 aaKnown RBP3.65□□□□□ -1.83
SCARB2-218ENST00000639715 DMXL2Q8TDJ6 3036 aa3.65□□□□□ -1.83
SCARB2-218ENST00000639715 LCE6AA0A183 80 aa3.64□□□□□ -1.83
SCARB2-218ENST00000639715 TACC2O95359 2948 aa3.64□□□□□ -1.83
SCARB2-218ENST00000639715 IGLV9-49A0A0B4J1Y8 123 aa3.64□□□□□ -1.83
SCARB2-218ENST00000639715 KRTAP10-11P60412 298 aa3.64□□□□□ -1.83
SCARB2-218ENST00000639715 ATMQ13315 3056 aa3.63□□□□□ -1.83
SCARB2-218ENST00000639715 IGLV8-61A0A075B6I0 122 aa3.63□□□□□ -1.83
SCARB2-218ENST00000639715 IGLV5-48A0A075B6I7 105 aa3.63□□□□□ -1.83
SCARB2-218ENST00000639715 A0A0G2JQZ4 141 aa3.63□□□□□ -1.83
SCARB2-218ENST00000639715 A0A1W2PNN7 141 aa3.63□□□□□ -1.83
SCARB2-218ENST00000639715 ACYP2P14621 99 aa3.63□□□□□ -1.83
SCARB2-218ENST00000639715 A8MWP4 228 aa3.63□□□□□ -1.83
SCARB2-218ENST00000639715 DNHD1Q96M86 4753 aa3.62□□□□□ -1.83
SCARB2-218ENST00000639715 IGLV5-37A0A075B6J1 123 aa3.62□□□□□ -1.83
SCARB2-218ENST00000639715 TP53AIP1Q9HCN2 124 aa3.62□□□□□ -1.83
SCARB2-218ENST00000639715 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
SCARB2-218ENST00000639715 IGHV6-1A0A0B4J1U7 121 aa3.62□□□□□ -1.83
SCARB2-218ENST00000639715 ANK2Q01484 3957 aa3.61□□□□□ -1.83
SCARB2-218ENST00000639715 FAM168BA1KXE4 195 aa3.61□□□□□ -1.83
SCARB2-218ENST00000639715 K7ERS5 55 aa3.6□□□□□ -1.83
SCARB2-218ENST00000639715 SPINT4Q6UDR6 99 aa3.6□□□□□ -1.83
SCARB2-218ENST00000639715 AKAP9Q99996 3911 aa3.6□□□□□ -1.83
SCARB2-218ENST00000639715 ASB16-AS1Q495Z4 193 aa3.6□□□□□ -1.83
SCARB2-218ENST00000639715 SPINK6Q6UWN8 80 aa3.6□□□□□ -1.83
SCARB2-218ENST00000639715 C9orf163Q8N9P6 203 aa3.59□□□□□ -1.83
SCARB2-218ENST00000639715 HRNRQ86YZ3 2850 aaPredicted RBP3.59□□□□□ -1.83
SCARB2-218ENST00000639715 NBDYA0A0U1RRE5 68 aa3.59□□□□□ -1.83
SCARB2-218ENST00000639715 HRES1P13985 223 aa3.59□□□□□ -1.83
SCARB2-218ENST00000639715 ASPMQ8IZT6 3477 aa3.59□□□□□ -1.83
SCARB2-218ENST00000639715 DMBT1Q9UGM3 2413 aaPredicted RBP3.59□□□□□ -1.84
SCARB2-218ENST00000639715 SPRR4Q96PI1 79 aa3.58□□□□□ -1.84
SCARB2-218ENST00000639715 LOC400499M0QZD8 3231 aa3.58□□□□□ -1.84
SCARB2-218ENST00000639715 ZZEF1O43149 2961 aa3.58□□□□□ -1.84
SCARB2-218ENST00000639715 IGLV5-52A0A0A0MRZ9 124 aa3.58□□□□□ -1.84
SCARB2-218ENST00000639715 IGFL1Q6UW32 110 aa3.58□□□□□ -1.84
SCARB2-218ENST00000639715 K7EIL1 84 aa3.58□□□□□ -1.84
SCARB2-218ENST00000639715 CNBPP62633 177 aaKnown RBP3.58□□□□□ -1.84
SCARB2-218ENST00000639715 SSBP3-AS1Q7Z2R9 100 aa3.57□□□□□ -1.84
SCARB2-218ENST00000639715 J3QL48 77 aa3.57□□□□□ -1.84
SCARB2-218ENST00000639715 PDZD2O15018 2839 aa3.57□□□□□ -1.84
SCARB2-218ENST00000639715 COL12A1Q99715 3063 aa3.57□□□□□ -1.84
SCARB2-218ENST00000639715 UTP20O75691 2785 aaKnown RBP3.57□□□□□ -1.84
SCARB2-218ENST00000639715 NBEAL2Q6ZNJ1 2754 aa3.56□□□□□ -1.84
SCARB2-218ENST00000639715 Q6ZR54 194 aa3.56□□□□□ -1.84
SCARB2-218ENST00000639715 SPINK1P00995 79 aa3.56□□□□□ -1.84
SCARB2-218ENST00000639715 CIRBP-AS1Q8TBR5 109 aa3.56□□□□□ -1.84
SCARB2-218ENST00000639715 SPENQ96T58 3664 aaKnown RBP3.56□□□□□ -1.84
SCARB2-218ENST00000639715 CHTF8P0CG12 524 aa3.56□□□□□ -1.84
SCARB2-218ENST00000639715 KRTAP26-1Q6PEX3 210 aa3.56□□□□□ -1.84
SCARB2-218ENST00000639715 SPRR1AP35321 89 aa3.55□□□□□ -1.84
SCARB2-218ENST00000639715 CASC10Q5T4H9 136 aa3.55□□□□□ -1.84
SCARB2-218ENST00000639715 ROMO1P60602 79 aa3.54□□□□□ -1.84
SCARB2-218ENST00000639715 TEP1Q99973 2627 aaKnown RBP3.54□□□□□ -1.84
SCARB2-218ENST00000639715 OTOGQ6ZRI0 2925 aa3.54□□□□□ -1.84
SCARB2-218ENST00000639715 CFAP47Q6ZTR5 3102 aa3.53□□□□□ -1.84
SCARB2-218ENST00000639715 ZANQ9Y493 2812 aa3.53□□□□□ -1.84
SCARB2-218ENST00000639715 FLG2Q5D862 2391 aaPredicted RBP3.53□□□□□ -1.84
SCARB2-218ENST00000639715 RTL8CO15255 209 aa3.53□□□□□ -1.84
SCARB2-218ENST00000639715 APLNQ9ULZ1 77 aa3.52□□□□□ -1.85
SCARB2-218ENST00000639715 KRTAP29-1A8MX34 341 aaPredicted RBP3.52□□□□□ -1.85
SCARB2-218ENST00000639715 SPATA8Q6RVD6 105 aa3.52□□□□□ -1.85
SCARB2-218ENST00000639715 COL6A5A8TX70 2615 aa3.52□□□□□ -1.85
SCARB2-218ENST00000639715 KRTAP16-1A8MUX0 517 aa3.51□□□□□ -1.85
SCARB2-218ENST00000639715 APCP25054 2843 aa3.51□□□□□ -1.85
SCARB2-218ENST00000639715 MRPL34Q9BQ48 92 aaKnown RBP3.51□□□□□ -1.85
SCARB2-218ENST00000639715 C8orf17Q9NRJ1 99 aa3.51□□□□□ -1.85
SCARB2-218ENST00000639715 CRIPTQ9P021 101 aa3.51□□□□□ -1.85
SCARB2-218ENST00000639715 ZNF861PO60384 105 aa3.5□□□□□ -1.85
SCARB2-218ENST00000639715 ITPR2Q14571 2701 aa3.49□□□□□ -1.85
SCARB2-218ENST00000639715 NF1P21359 2839 aa3.49□□□□□ -1.85
SCARB2-218ENST00000639715 NBPF19A0A087WUL8 3843 aa3.49□□□□□ -1.85
SCARB2-218ENST00000639715 KRTAP17-1Q9BYP8 105 aa3.49□□□□□ -1.85
SCARB2-218ENST00000639715 BIRC6Q9NR09 4857 aa3.49□□□□□ -1.85
SCARB2-218ENST00000639715 A0A087WTM6 91 aa3.49□□□□□ -1.85
SCARB2-218ENST00000639715 A0A1B0GVX0 72 aa3.49□□□□□ -1.85
SCARB2-218ENST00000639715 TNP2Q05952 138 aa3.49□□□□□ -1.85
SCARB2-218ENST00000639715 MMP24-AS1A0A0U1RRL7 71 aa3.49□□□□□ -1.85
SCARB2-218ENST00000639715 SPRR1BP22528 89 aa3.49□□□□□ -1.85
SCARB2-218ENST00000639715 A0A087X002 238 aa3.48□□□□□ -1.85
SCARB2-218ENST00000639715 FAM229AH3BQW9 127 aa3.48□□□□□ -1.85
SCARB2-218ENST00000639715 LAMA5O15230 3695 aa3.48□□□□□ -1.85
SCARB2-218ENST00000639715 KRTAP4-16G5E9R7 235 aaPredicted RBP3.47□□□□□ -1.85
SCARB2-218ENST00000639715 KRTAP25-1Q3LHN0 102 aa3.47□□□□□ -1.85
SCARB2-218ENST00000639715 PLAC8Q9NZF1 115 aa3.47□□□□□ -1.85
SCARB2-218ENST00000639715 FBN1P35555 2871 aaKnown RBP3.46□□□□□ -1.85
SCARB2-218ENST00000639715 IGKV2D-30A0A075B6S6 120 aa3.46□□□□□ -1.86
SCARB2-218ENST00000639715 IGKV2-30P06310 120 aa3.46□□□□□ -1.86
SCARB2-218ENST00000639715 WWC2-AS2Q96NR7 200 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms