RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 LINC00575Q6W349 94 aa8.91□□□□□ -0.98
SMN2-216ENST00000638794 VAMP3Q15836 100 aa8.9□□□□□ -0.98
SMN2-216ENST00000638794 Q6ZQY7 126 aa8.89□□□□□ -0.99
SMN2-216ENST00000638794 SNRPEP62304 92 aaKnown RBP8.88□□□□□ -0.99
SMN2-216ENST00000638794 hADV29S1A0JD25 119 aa8.87□□□□□ -0.99
SMN2-216ENST00000638794 Q6JHZ5 121 aa8.87□□□□□ -0.99
SMN2-216ENST00000638794 IGFL1Q6UW32 110 aa8.87□□□□□ -0.99
SMN2-216ENST00000638794 CLEC2BQ92478 149 aa8.87□□□□□ -0.99
SMN2-216ENST00000638794 TRBV7-7A0A0K0K1E9 115 aa8.86□□□□□ -0.99
SMN2-216ENST00000638794 OCIAD2Q56VL3 154 aa8.83□□□□□ -1
SMN2-216ENST00000638794 OBSCN-AS1Q96MR7 158 aa8.82□□□□□ -1
SMN2-216ENST00000638794 HSBP1L1C9JCN9 74 aa8.8□□□□□ -1
SMN2-216ENST00000638794 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.8□□□□□ -1
SMN2-216ENST00000638794 Q75L30 129 aa8.8□□□□□ -1
SMN2-216ENST00000638794 HIST3H2BBQ8N257 126 aa8.79□□□□□ -1
SMN2-216ENST00000638794 C12orf57Q99622 126 aa8.79□□□□□ -1
SMN2-216ENST00000638794 HIST1H2BLQ99880 126 aa8.79□□□□□ -1
SMN2-216ENST00000638794 ATP11AUNQ6ZP68 121 aa8.78□□□□□ -1
SMN2-216ENST00000638794 PPDPFLQ8WWR9 84 aa8.77□□□□□ -1.01
SMN2-216ENST00000638794 H3BUT2 72 aa8.76□□□□□ -1.01
SMN2-216ENST00000638794 S100A2P29034 98 aa8.76□□□□□ -1.01
SMN2-216ENST00000638794 BVES-AS1Q5T3Y7 98 aa8.76□□□□□ -1.01
SMN2-216ENST00000638794 Q6Q795 121 aa8.76□□□□□ -1.01
SMN2-216ENST00000638794 LST1O00453 97 aa8.75□□□□□ -1.01
SMN2-216ENST00000638794 SNHG12Q9BXW3 62 aa8.75□□□□□ -1.01
SMN2-216ENST00000638794 HIST1H4GQ99525 98 aa8.73□□□□□ -1.01
SMN2-216ENST00000638794 Q96NJ1 140 aa8.72□□□□□ -1.01
SMN2-216ENST00000638794 SCGB1D1O95968 90 aa8.71□□□□□ -1.02
SMN2-216ENST00000638794 SS18L2Q9UHA2 77 aa8.69□□□□□ -1.02
SMN2-216ENST00000638794 COX8AP10176 69 aa8.67□□□□□ -1.02
SMN2-216ENST00000638794 C20orf166-AS1Q96NR2 134 aa8.66□□□□□ -1.02
SMN2-216ENST00000638794 CFC1P0CG37 223 aa8.65□□□□□ -1.02
SMN2-216ENST00000638794 TEN1Q86WV5 123 aa8.65□□□□□ -1.02
SMN2-216ENST00000638794 A8MUU9 505 aa8.64□□□□□ -1.03
SMN2-216ENST00000638794 S100A6P06703 90 aa8.64□□□□□ -1.03
SMN2-216ENST00000638794 FAM218AQ96MZ4 157 aa8.64□□□□□ -1.03
SMN2-216ENST00000638794 A0A087WSZ3 146 aa8.63□□□□□ -1.03
SMN2-216ENST00000638794 DLEU1O43261 78 aa8.63□□□□□ -1.03
SMN2-216ENST00000638794 NDUFV3P56181 108 aaKnown RBP8.63□□□□□ -1.03
SMN2-216ENST00000638794 RAB37Q96AX2 223 aa8.63□□□□□ -1.03
SMN2-216ENST00000638794 SNCGO76070 127 aa8.62□□□□□ -1.03
SMN2-216ENST00000638794 H0YGX0 51 aa8.61□□□□□ -1.03
SMN2-216ENST00000638794 A0A0B4J2C4 111 aa8.6□□□□□ -1.03
SMN2-216ENST00000638794 H3BMG7 143 aa8.59□□□□□ -1.03
SMN2-216ENST00000638794 C14orf144Q96I85 54 aa8.59□□□□□ -1.03
SMN2-216ENST00000638794 KRTAP9-8Q9BYQ0 159 aa8.59□□□□□ -1.03
SMN2-216ENST00000638794 DSCR10P59022 87 aa8.58□□□□□ -1.04
SMN2-216ENST00000638794 TRBV20-1A0A075B6N2 111 aa8.57□□□□□ -1.04
SMN2-216ENST00000638794 HIGD1BQ9P298 99 aa8.57□□□□□ -1.04
SMN2-216ENST00000638794 USH2AO75445 5202 aa8.56□□□□□ -1.04
SMN2-216ENST00000638794 FABP2P12104 132 aa8.55□□□□□ -1.04
SMN2-216ENST00000638794 SSPOA2VEC9 5147 aa8.54□□□□□ -1.04
SMN2-216ENST00000638794 A0A1W2PNM2 257 aa8.54□□□□□ -1.04
SMN2-216ENST00000638794 C2orf91Q6ZV80 131 aa8.54□□□□□ -1.04
SMN2-216ENST00000638794 SIGMAR1Q99720 223 aa8.54□□□□□ -1.04
SMN2-216ENST00000638794 PAM16Q9Y3D7 125 aa8.54□□□□□ -1.04
SMN2-216ENST00000638794 A0A1B0GX51 115 aa8.53□□□□□ -1.04
SMN2-216ENST00000638794 GHRHP01286 108 aa8.52□□□□□ -1.05
SMN2-216ENST00000638794 SPATA45Q537H7 98 aa8.52□□□□□ -1.05
SMN2-216ENST00000638794 KRTAP16-1A8MUX0 517 aa8.51□□□□□ -1.05
SMN2-216ENST00000638794 PRO1854Q9UHT4 67 aa8.51□□□□□ -1.05
SMN2-216ENST00000638794 CEND1Q8N111 149 aa8.5□□□□□ -1.05
SMN2-216ENST00000638794 S100A1P23297 94 aa8.49□□□□□ -1.05
SMN2-216ENST00000638794 LINC00313P59037 77 aa8.49□□□□□ -1.05
SMN2-216ENST00000638794 TRIAP1O43715 76 aa8.48□□□□□ -1.05
SMN2-216ENST00000638794 IGKV4-1P06312 121 aa8.47□□□□□ -1.05
SMN2-216ENST00000638794 VAMP8Q9BV40 100 aa8.47□□□□□ -1.05
SMN2-216ENST00000638794 FAM236DA0A1B0GTK5 79 aa8.46□□□□□ -1.06
SMN2-216ENST00000638794 A0A1B0GV72 72 aa8.46□□□□□ -1.06
SMN2-216ENST00000638794 TMEM238LA0A1B0GVL6 79 aa8.46□□□□□ -1.06
SMN2-216ENST00000638794 A6NJY4 79 aa8.46□□□□□ -1.06
SMN2-216ENST00000638794 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.46□□□□□ -1.06
SMN2-216ENST00000638794 FAM236CP0DP71 79 aa8.46□□□□□ -1.06
SMN2-216ENST00000638794 FXYD2P54710 66 aa8.46□□□□□ -1.06
SMN2-216ENST00000638794 ANKRD29Q8N6D5 301 aa8.46□□□□□ -1.06
SMN2-216ENST00000638794 TRBV7-4A0A0J9YYF1 115 aa8.45□□□□□ -1.06
SMN2-216ENST00000638794 NOTCH2NLQ7Z3S9 236 aa8.45□□□□□ -1.06
SMN2-216ENST00000638794 MT2AP02795 61 aa8.44□□□□□ -1.06
SMN2-216ENST00000638794 DEFB116Q30KQ4 102 aa8.43□□□□□ -1.06
SMN2-216ENST00000638794 ORMDL1Q9P0S3 153 aa8.43□□□□□ -1.06
SMN2-216ENST00000638794 DNAL4O96015 105 aa8.42□□□□□ -1.06
SMN2-216ENST00000638794 HRES1P13985 223 aa8.42□□□□□ -1.06
SMN2-216ENST00000638794 MPLKIPQ8TAP9 179 aa8.42□□□□□ -1.06
SMN2-216ENST00000638794 KRTAP9-7A8MTY7 169 aa8.41□□□□□ -1.06
SMN2-216ENST00000638794 LINC00472Q9H8W2 130 aa8.41□□□□□ -1.06
SMN2-216ENST00000638794 RBM12B-AS1Q9P1G2 102 aa8.4□□□□□ -1.06
SMN2-216ENST00000638794 MT1FP04733 61 aa8.39□□□□□ -1.07
SMN2-216ENST00000638794 CCKP06307 115 aa8.39□□□□□ -1.07
SMN2-216ENST00000638794 IGHV6-1A0A0B4J1U7 121 aa8.38□□□□□ -1.07
SMN2-216ENST00000638794 H3BQ85 93 aa8.38□□□□□ -1.07
SMN2-216ENST00000638794 TMEM256-PLSCR3K7ERE1 68 aa8.37□□□□□ -1.07
SMN2-216ENST00000638794 K7ERJ3 54 aa8.37□□□□□ -1.07
SMN2-216ENST00000638794 TRACP01848 142 aa8.37□□□□□ -1.07
SMN2-216ENST00000638794 PSMB2P49721 201 aa8.37□□□□□ -1.07
SMN2-216ENST00000638794 LCE2BO14633 110 aa8.34□□□□□ -1.07
SMN2-216ENST00000638794 FCGBPQ9Y6R7 5405 aaPredicted RBP8.34□□□□□ -1.07
SMN2-216ENST00000638794 COX6CP09669 75 aa8.33□□□□□ -1.08
SMN2-216ENST00000638794 HSD52Q0P140 79 aa8.33□□□□□ -1.08
SMN2-216ENST00000638794 KRTAP10-10P60014 251 aa8.32□□□□□ -1.08
SMN2-216ENST00000638794 UBE2V1Q13404 147 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms