RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 Q5W150 140 aa8.19□□□□□ -1.1
UBE3A-228ENST00000638155 ITPR3Q14573 2671 aa8.17□□□□□ -1.1
UBE3A-228ENST00000638155 MMP24-AS1A0A0U1RRL7 71 aa8.16□□□□□ -1.1
UBE3A-228ENST00000638155 KLK9Q2XQG4 91 aa8.16□□□□□ -1.1
UBE3A-228ENST00000638155 FLNAP21333 2647 aaKnown RBP8.15□□□□□ -1.1
UBE3A-228ENST00000638155 CASC10Q5T4H9 136 aa8.14□□□□□ -1.11
UBE3A-228ENST00000638155 C20orf166-AS1Q96NR2 134 aa8.12□□□□□ -1.11
UBE3A-228ENST00000638155 HELZ2Q9BYK8 2649 aaKnown RBP8.11□□□□□ -1.11
UBE3A-228ENST00000638155 Q5VSD8 79 aa8.07□□□□□ -1.12
UBE3A-228ENST00000638155 NOTCH1P46531 2555 aa8.06□□□□□ -1.12
UBE3A-228ENST00000638155 ADM2Q7Z4H4 148 aa8.06□□□□□ -1.12
UBE3A-228ENST00000638155 CYSTM1Q9H1C7 97 aa8.04□□□□□ -1.12
UBE3A-228ENST00000638155 Q8NDZ9 215 aa8.03□□□□□ -1.12
UBE3A-228ENST00000638155 CHD6Q8TD26 2715 aa8.02□□□□□ -1.13
UBE3A-228ENST00000638155 GOLGB1Q14789 3259 aaKnown RBP8.01□□□□□ -1.13
UBE3A-228ENST00000638155 SPATA8Q6RVD6 105 aa8.01□□□□□ -1.13
UBE3A-228ENST00000638155 COL6A5A8TX70 2615 aa8□□□□□ -1.13
UBE3A-228ENST00000638155 NDUFAF8A1L188 74 aa8□□□□□ -1.13
UBE3A-228ENST00000638155 TEX15Q9BXT5 2789 aa7.99□□□□□ -1.13
UBE3A-228ENST00000638155 KRTAP25-1Q3LHN0 102 aa7.99□□□□□ -1.13
UBE3A-228ENST00000638155 LINC00472Q9H8W2 130 aa7.98□□□□□ -1.13
UBE3A-228ENST00000638155 KMT2BQ9UMN6 2715 aaPredicted RBP7.97□□□□□ -1.13
UBE3A-228ENST00000638155 OXTP01178 125 aa7.96□□□□□ -1.13
UBE3A-228ENST00000638155 A0A096LNT2 108 aa7.95□□□□□ -1.14
UBE3A-228ENST00000638155 BAHCC1Q9P281 2608 aa7.95□□□□□ -1.14
UBE3A-228ENST00000638155 GCN1Q92616 2671 aaKnown RBP7.95□□□□□ -1.14
UBE3A-228ENST00000638155 UNC79Q9P2D8 2635 aa7.94□□□□□ -1.14
UBE3A-228ENST00000638155 UTRNP46939 3433 aa7.94□□□□□ -1.14
UBE3A-228ENST00000638155 PANO1I0J062 215 aa7.93□□□□□ -1.14
UBE3A-228ENST00000638155 PLAC8Q9NZF1 115 aa7.93□□□□□ -1.14
UBE3A-228ENST00000638155 KRTAP10-3P60369 221 aa7.89□□□□□ -1.15
UBE3A-228ENST00000638155 Q6ZR54 194 aa7.87□□□□□ -1.15
UBE3A-228ENST00000638155 EP400Q96L91 3159 aa7.84□□□□□ -1.16
UBE3A-228ENST00000638155 SPRR1AP35321 89 aa7.83□□□□□ -1.16
UBE3A-228ENST00000638155 KRTAP26-1Q6PEX3 210 aa7.83□□□□□ -1.16
UBE3A-228ENST00000638155 C10orf95Q9H7T3 257 aa7.83□□□□□ -1.16
UBE3A-228ENST00000638155 SETXQ7Z333 2677 aaKnown RBP7.83□□□□□ -1.16
UBE3A-228ENST00000638155 CEP350Q5VT06 3117 aa7.82□□□□□ -1.16
UBE3A-228ENST00000638155 A6NN06 94 aa7.81□□□□□ -1.16
UBE3A-228ENST00000638155 PCNTO95613 3336 aa7.8□□□□□ -1.16
UBE3A-228ENST00000638155 SPRR1BP22528 89 aa7.8□□□□□ -1.16
UBE3A-228ENST00000638155 NSD1Q96L73 2696 aaPredicted RBP7.79□□□□□ -1.16
UBE3A-228ENST00000638155 A8MUU9 505 aa7.74□□□□□ -1.17
UBE3A-228ENST00000638155 TEP1Q99973 2627 aaKnown RBP7.74□□□□□ -1.17
UBE3A-228ENST00000638155 ITPR2Q14571 2701 aa7.71□□□□□ -1.17
UBE3A-228ENST00000638155 LCE6AA0A183 80 aa7.71□□□□□ -1.18
UBE3A-228ENST00000638155 TNP1P09430 55 aa7.69□□□□□ -1.18
UBE3A-228ENST00000638155 A8MU10 97 aa7.69□□□□□ -1.18
UBE3A-228ENST00000638155 IGSF10Q6WRI0 2623 aa7.67□□□□□ -1.18
UBE3A-228ENST00000638155 APCP25054 2843 aa7.66□□□□□ -1.18
UBE3A-228ENST00000638155 C5orf42Q9H799 3197 aa7.62□□□□□ -1.19
UBE3A-228ENST00000638155 KRTAP29-1A8MX34 341 aaPredicted RBP7.58□□□□□ -1.2
UBE3A-228ENST00000638155 KRTAP1-3Q8IUG1 177 aa7.57□□□□□ -1.2
UBE3A-228ENST00000638155 PP632Q6XCG6 107 aa7.57□□□□□ -1.2
UBE3A-228ENST00000638155 A0A087X002 238 aa7.55□□□□□ -1.2
UBE3A-228ENST00000638155 UTP20O75691 2785 aaKnown RBP7.54□□□□□ -1.2
UBE3A-228ENST00000638155 XIRP2A4UGR9 3374 aa7.53□□□□□ -1.2
UBE3A-228ENST00000638155 KRTAP1-1Q07627 177 aa7.52□□□□□ -1.21
UBE3A-228ENST00000638155 KRTAP10-1P60331 282 aa7.51□□□□□ -1.21
UBE3A-228ENST00000638155 KRTAP11-1Q8IUC1 163 aa7.5□□□□□ -1.21
UBE3A-228ENST00000638155 NBEAL2Q6ZNJ1 2754 aa7.48□□□□□ -1.21
UBE3A-228ENST00000638155 ZNF292O60281 2723 aa7.48□□□□□ -1.21
UBE3A-228ENST00000638155 DNAH12Q6ZR08 3092 aa7.47□□□□□ -1.21
UBE3A-228ENST00000638155 RPS29P62273 56 aaKnown RBP7.47□□□□□ -1.21
UBE3A-228ENST00000638155 P0C880 135 aa7.47□□□□□ -1.21
UBE3A-228ENST00000638155 MAP1AP78559 2803 aaPredicted RBP7.46□□□□□ -1.22
UBE3A-228ENST00000638155 KRTAP1-5Q9BYS1 174 aa7.45□□□□□ -1.22
UBE3A-228ENST00000638155 KRTAP10-2P60368 255 aa7.44□□□□□ -1.22
UBE3A-228ENST00000638155 NOTCH2NLQ7Z3S9 236 aa7.44□□□□□ -1.22
UBE3A-228ENST00000638155 KRTAP4-16G5E9R7 235 aaPredicted RBP7.43□□□□□ -1.22
UBE3A-228ENST00000638155 UBR5O95071 2799 aaPredicted RBP7.42□□□□□ -1.22
UBE3A-228ENST00000638155 ITPR1Q14643 2758 aa7.36□□□□□ -1.23
UBE3A-228ENST00000638155 CFAP54Q96N23 3096 aa7.35□□□□□ -1.23
UBE3A-228ENST00000638155 LAMA2P24043 3122 aaKnown RBP7.34□□□□□ -1.23
UBE3A-228ENST00000638155 REV3LO60673 3130 aa7.33□□□□□ -1.24
UBE3A-228ENST00000638155 A0A0C4DFX4 3053 aa7.33□□□□□ -1.24
UBE3A-228ENST00000638155 KRTAP10-8P60410 259 aa7.31□□□□□ -1.24
UBE3A-228ENST00000638155 CRYBG3Q68DQ2 2970 aa7.26□□□□□ -1.25
UBE3A-228ENST00000638155 PRO2289Q9P1D8 64 aa7.24□□□□□ -1.25
UBE3A-228ENST00000638155 TRANK1O15050 2925 aa7.23□□□□□ -1.25
UBE3A-228ENST00000638155 Q6ZRN7 208 aaPredicted RBP7.22□□□□□ -1.25
UBE3A-228ENST00000638155 LRBAP50851 2863 aa7.21□□□□□ -1.25
UBE3A-228ENST00000638155 DSPP15924 2871 aaKnown RBP7.19□□□□□ -1.26
UBE3A-228ENST00000638155 CELSR3Q9NYQ7 3312 aa7.18□□□□□ -1.26
UBE3A-228ENST00000638155 FRYQ5TBA9 3013 aa7.18□□□□□ -1.26
UBE3A-228ENST00000638155 BRCA2P51587 3418 aa7.14□□□□□ -1.27
UBE3A-228ENST00000638155 CDH23Q9H251 3354 aa7.12□□□□□ -1.27
UBE3A-228ENST00000638155 H0YAA0 97 aa7.11□□□□□ -1.27
UBE3A-228ENST00000638155 TENM3Q9P273 2699 aa7.11□□□□□ -1.27
UBE3A-228ENST00000638155 MGAQ8IWI9 3026 aa7.1□□□□□ -1.27
UBE3A-228ENST00000638155 KRTAP13-2Q52LG2 175 aa7.1□□□□□ -1.27
UBE3A-228ENST00000638155 FLNCQ14315 2725 aa7.08□□□□□ -1.28
UBE3A-228ENST00000638155 WDFY4Q6ZS81 3184 aa7.07□□□□□ -1.28
UBE3A-228ENST00000638155 TENM1Q9UKZ4 2725 aa7.05□□□□□ -1.28
UBE3A-228ENST00000638155 HIVEP1P15822 2718 aa7□□□□□ -1.29
UBE3A-228ENST00000638155 KRTAP10-10P60014 251 aa6.99□□□□□ -1.29
UBE3A-228ENST00000638155 TRIOO75962 3097 aa6.99□□□□□ -1.29
UBE3A-228ENST00000638155 DNAH14Q0VDD8 3507 aa6.99□□□□□ -1.29
UBE3A-228ENST00000638155 ASH1LQ9NR48 2969 aaKnown RBP6.99□□□□□ -1.29
UBE3A-228ENST00000638155 KRTAP13-1Q8IUC0 172 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms