RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 H1FX-AS1Q4G0G2 97 aa12.33□□□□□ -0.44
CACNA1A-257ENST00000638009 ZNF292O60281 2723 aa12.31□□□□□ -0.44
CACNA1A-257ENST00000638009 RPL37P61927 97 aaKnown RBP12.31□□□□□ -0.44
CACNA1A-257ENST00000638009 C19orf73Q9NVV2 129 aa12.31□□□□□ -0.44
CACNA1A-257ENST00000638009 ZCCHC13Q8WW36 166 aaKnown RBP12.26□□□□□ -0.45
CACNA1A-257ENST00000638009 ANAPC11Q9NYG5 84 aa12.25□□□□□ -0.45
CACNA1A-257ENST00000638009 Q5VV11 94 aa12.24□□□□□ -0.45
CACNA1A-257ENST00000638009 KRTAP24-1Q3LI83 254 aa12.22□□□□□ -0.45
CACNA1A-257ENST00000638009 LINC00612Q8N6U2 182 aa12.21□□□□□ -0.46
CACNA1A-257ENST00000638009 EIF4EBP3O60516 100 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-257ENST00000638009 PLAC4Q8WY50 150 aa12.2□□□□□ -0.46
CACNA1A-257ENST00000638009 CFAP54Q96N23 3096 aa12.2□□□□□ -0.46
CACNA1A-257ENST00000638009 A0A0G2JQZ4 141 aa12.19□□□□□ -0.46
CACNA1A-257ENST00000638009 A0A1W2PNN7 141 aa12.19□□□□□ -0.46
CACNA1A-257ENST00000638009 DNAH12Q6ZR08 3092 aa12.19□□□□□ -0.46
CACNA1A-257ENST00000638009 SMR3BP02814 79 aaPredicted RBP12.19□□□□□ -0.46
CACNA1A-257ENST00000638009 PRAC1Q96KF2 57 aa12.17□□□□□ -0.46
CACNA1A-257ENST00000638009 GIG44P09565 113 aaPredicted RBP12.17□□□□□ -0.46
CACNA1A-257ENST00000638009 Q5XG85 94 aa12.15□□□□□ -0.46
CACNA1A-257ENST00000638009 EP400Q96L91 3159 aa12.14□□□□□ -0.47
CACNA1A-257ENST00000638009 C10orf142B7Z368 130 aa12.14□□□□□ -0.47
CACNA1A-257ENST00000638009 SEC61BP60468 96 aaKnown RBP12.13□□□□□ -0.47
CACNA1A-257ENST00000638009 K7EIL1 84 aa12.13□□□□□ -0.47
CACNA1A-257ENST00000638009 ITPR1Q14643 2758 aa12.1□□□□□ -0.47
CACNA1A-257ENST00000638009 FP248Q71RG6 208 aaPredicted RBP12.08□□□□□ -0.48
CACNA1A-257ENST00000638009 C5orf42Q9H799 3197 aa12.07□□□□□ -0.48
CACNA1A-257ENST00000638009 UBR5O95071 2799 aaPredicted RBP12.07□□□□□ -0.48
CACNA1A-257ENST00000638009 LAMA2P24043 3122 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-257ENST00000638009 KRTAP10-11P60412 298 aa12.03□□□□□ -0.48
CACNA1A-257ENST00000638009 Q5W150 140 aa12.03□□□□□ -0.48
CACNA1A-257ENST00000638009 MMP24-AS1A0A0U1RRL7 71 aa12.02□□□□□ -0.49
CACNA1A-257ENST00000638009 A0A0C4DFX4 3053 aa11.98□□□□□ -0.49
CACNA1A-257ENST00000638009 M0QZ58 72 aa11.98□□□□□ -0.49
CACNA1A-257ENST00000638009 NBEAL2Q6ZNJ1 2754 aa11.98□□□□□ -0.49
CACNA1A-257ENST00000638009 DSPP15924 2871 aaKnown RBP11.93□□□□□ -0.5
CACNA1A-257ENST00000638009 TRANK1O15050 2925 aa11.93□□□□□ -0.5
CACNA1A-257ENST00000638009 LINC00472Q9H8W2 130 aa11.88□□□□□ -0.51
CACNA1A-257ENST00000638009 PLAC8Q9NZF1 115 aa11.83□□□□□ -0.51
CACNA1A-257ENST00000638009 GOLGB1Q14789 3259 aaKnown RBP11.82□□□□□ -0.52
CACNA1A-257ENST00000638009 LRBAP50851 2863 aa11.81□□□□□ -0.52
CACNA1A-257ENST00000638009 FRYLO94915 3013 aa11.8□□□□□ -0.52
CACNA1A-257ENST00000638009 Q6ZR54 194 aa11.8□□□□□ -0.52
CACNA1A-257ENST00000638009 C20orf166-AS1Q96NR2 134 aa11.8□□□□□ -0.52
CACNA1A-257ENST00000638009 SPRR1AP35321 89 aa11.77□□□□□ -0.52
CACNA1A-257ENST00000638009 PANO1I0J062 215 aa11.77□□□□□ -0.53
CACNA1A-257ENST00000638009 SPRR1BP22528 89 aa11.75□□□□□ -0.53
CACNA1A-257ENST00000638009 ADM2Q7Z4H4 148 aa11.74□□□□□ -0.53
CACNA1A-257ENST00000638009 CASC10Q5T4H9 136 aa11.73□□□□□ -0.53
CACNA1A-257ENST00000638009 Q8NDZ9 215 aa11.73□□□□□ -0.53
CACNA1A-257ENST00000638009 KRTAP25-1Q3LHN0 102 aa11.73□□□□□ -0.53
CACNA1A-257ENST00000638009 SPATA8Q6RVD6 105 aa11.73□□□□□ -0.53
CACNA1A-257ENST00000638009 A0A096LNT2 108 aa11.72□□□□□ -0.53
CACNA1A-257ENST00000638009 CHD9Q3L8U1 2897 aa11.68□□□□□ -0.54
CACNA1A-257ENST00000638009 UTRNP46939 3433 aa11.66□□□□□ -0.54
CACNA1A-257ENST00000638009 TENM3Q9P273 2699 aa11.63□□□□□ -0.55
CACNA1A-257ENST00000638009 CYSTM1Q9H1C7 97 aa11.6□□□□□ -0.55
CACNA1A-257ENST00000638009 A0A087X002 238 aa11.6□□□□□ -0.55
CACNA1A-257ENST00000638009 TRIOO75962 3097 aa11.59□□□□□ -0.55
CACNA1A-257ENST00000638009 NDUFAF8A1L188 74 aa11.59□□□□□ -0.55
CACNA1A-257ENST00000638009 OXTP01178 125 aa11.58□□□□□ -0.56
CACNA1A-257ENST00000638009 KRTAP26-1Q6PEX3 210 aa11.52□□□□□ -0.57
CACNA1A-257ENST00000638009 TENM1Q9UKZ4 2725 aa11.52□□□□□ -0.57
CACNA1A-257ENST00000638009 NF1P21359 2839 aa11.51□□□□□ -0.57
CACNA1A-257ENST00000638009 FRYQ5TBA9 3013 aa11.5□□□□□ -0.57
CACNA1A-257ENST00000638009 KALRNO60229 2985 aa11.5□□□□□ -0.57
CACNA1A-257ENST00000638009 FLNCQ14315 2725 aa11.48□□□□□ -0.57
CACNA1A-257ENST00000638009 MGAQ8IWI9 3026 aa11.48□□□□□ -0.57
CACNA1A-257ENST00000638009 ASH1LQ9NR48 2969 aaKnown RBP11.46□□□□□ -0.57
CACNA1A-257ENST00000638009 KRTAP10-3P60369 221 aa11.46□□□□□ -0.57
CACNA1A-257ENST00000638009 A6NN06 94 aa11.46□□□□□ -0.58
CACNA1A-257ENST00000638009 PP632Q6XCG6 107 aa11.45□□□□□ -0.58
CACNA1A-257ENST00000638009 TNP1P09430 55 aa11.43□□□□□ -0.58
CACNA1A-257ENST00000638009 VPS13AQ96RL7 3174 aa11.43□□□□□ -0.58
CACNA1A-257ENST00000638009 A8MUU9 505 aa11.42□□□□□ -0.58
CACNA1A-257ENST00000638009 CHD7Q9P2D1 2997 aa11.41□□□□□ -0.58
CACNA1A-257ENST00000638009 Q5VSD8 79 aa11.4□□□□□ -0.58
CACNA1A-257ENST00000638009 RPS29P62273 56 aaKnown RBP11.39□□□□□ -0.59
CACNA1A-257ENST00000638009 REV3LO60673 3130 aa11.38□□□□□ -0.59
CACNA1A-257ENST00000638009 COL12A1Q99715 3063 aa11.35□□□□□ -0.59
CACNA1A-257ENST00000638009 WDFY4Q6ZS81 3184 aa11.34□□□□□ -0.59
CACNA1A-257ENST00000638009 FREM2Q5SZK8 3169 aa11.32□□□□□ -0.6
CACNA1A-257ENST00000638009 C10orf95Q9H7T3 257 aa11.31□□□□□ -0.6
CACNA1A-257ENST00000638009 NIPBLQ6KC79 2804 aaeCLIP11.27□□□□□ -0.6
CACNA1A-257ENST00000638009 CRYBG3Q68DQ2 2970 aa11.27□□□□□ -0.61
CACNA1A-257ENST00000638009 KRTAP29-1A8MX34 341 aaPredicted RBP11.26□□□□□ -0.61
CACNA1A-257ENST00000638009 CELSR2Q9HCU4 2923 aa11.26□□□□□ -0.61
CACNA1A-257ENST00000638009 HIVEP1P15822 2718 aa11.23□□□□□ -0.61
CACNA1A-257ENST00000638009 PRUNE2Q8WUY3 3088 aa11.19□□□□□ -0.62
CACNA1A-257ENST00000638009 PDZD2O15018 2839 aa11.19□□□□□ -0.62
CACNA1A-257ENST00000638009 DMXL2Q8TDJ6 3036 aa11.13□□□□□ -0.63
CACNA1A-257ENST00000638009 KRTAP4-16G5E9R7 235 aaPredicted RBP11.11□□□□□ -0.63
CACNA1A-257ENST00000638009 LAMA1P25391 3075 aa11.1□□□□□ -0.63
CACNA1A-257ENST00000638009 TGP01266 2768 aa11.1□□□□□ -0.63
CACNA1A-257ENST00000638009 KRTAP11-1Q8IUC1 163 aa11.08□□□□□ -0.64
CACNA1A-257ENST00000638009 TNRC18O15417 2968 aaPredicted RBP11.07□□□□□ -0.64
CACNA1A-257ENST00000638009 KRTAP1-3Q8IUG1 177 aa11.06□□□□□ -0.64
CACNA1A-257ENST00000638009 LCE6AA0A183 80 aa11.06□□□□□ -0.64
CACNA1A-257ENST00000638009 XIRP2A4UGR9 3374 aa11.05□□□□□ -0.64
CACNA1A-257ENST00000638009 A8MU10 97 aa11.04□□□□□ -0.64
CACNA1A-257ENST00000638009 RANBP2P49792 3224 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms