RNA–Protein interactions for RNA: ENST00000637789.1

CHD2-229, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-229ENST00000637789 C1orf137Q5JT78 98 aa5.72□□□□□ -1.49
CHD2-229ENST00000637789 ATP5EP2Q5VTU8 51 aa5.72□□□□□ -1.49
CHD2-229ENST00000637789 LINC00337Q8N6G1 96 aa5.72□□□□□ -1.49
CHD2-229ENST00000637789 IGKV2-28A0A075B6P5 120 aa5.71□□□□□ -1.5
CHD2-229ENST00000637789 IGKV2D-28P01615 120 aa5.71□□□□□ -1.5
CHD2-229ENST00000637789 COX7CP15954 63 aa5.71□□□□□ -1.5
CHD2-229ENST00000637789 C9orf153Q5TBE3 101 aa5.71□□□□□ -1.5
CHD2-229ENST00000637789 CLPSL2Q6UWE3 100 aa5.71□□□□□ -1.5
CHD2-229ENST00000637789 IGLV4-60A0A075B6I1 120 aa5.7□□□□□ -1.5
CHD2-229ENST00000637789 IGLV7-46A0A075B6I9 117 aa5.7□□□□□ -1.5
CHD2-229ENST00000637789 IGKV3OR2-268A0A0C4DH90 116 aa5.7□□□□□ -1.5
CHD2-229ENST00000637789 CCKP06307 115 aa5.7□□□□□ -1.5
CHD2-229ENST00000637789 PDE6GP18545 87 aa5.7□□□□□ -1.5
CHD2-229ENST00000637789 PFN2P35080 140 aa5.7□□□□□ -1.5
CHD2-229ENST00000637789 FAM218AQ96MZ4 157 aa5.7□□□□□ -1.5
CHD2-229ENST00000637789 LINC00167Q96N53 147 aa5.7□□□□□ -1.5
CHD2-229ENST00000637789 TRBV10-3A0A0K0K1G6 114 aa5.69□□□□□ -1.5
CHD2-229ENST00000637789 CD164L2Q6UWJ8 174 aa5.69□□□□□ -1.5
CHD2-229ENST00000637789 KRTAP19-1Q8IUB9 90 aa5.69□□□□□ -1.5
CHD2-229ENST00000637789 LINC00474Q9P2X8 69 aa5.69□□□□□ -1.5
CHD2-229ENST00000637789 BCE1O60756 84 aa5.68□□□□□ -1.5
CHD2-229ENST00000637789 IGLV7-43P04211 117 aa5.68□□□□□ -1.5
CHD2-229ENST00000637789 RPL18AQ02543 176 aaKnown RBP5.68□□□□□ -1.5
CHD2-229ENST00000637789 PRR34Q9NV39 138 aa5.68□□□□□ -1.5
CHD2-229ENST00000637789 C22orf24Q9Y442 160 aa5.68□□□□□ -1.5
CHD2-229ENST00000637789 HIST1H4AP62805 103 aaKnown RBP5.67□□□□□ -1.5
CHD2-229ENST00000637789 RPS28P62857 69 aaKnown RBP5.67□□□□□ -1.5
CHD2-229ENST00000637789 SMCR5Q8TEV8 140 aa5.67□□□□□ -1.5
CHD2-229ENST00000637789 hADV29S1A0JD25 119 aa5.66□□□□□ -1.5
CHD2-229ENST00000637789 XCL1P47992 114 aa5.66□□□□□ -1.5
CHD2-229ENST00000637789 KRTAP6-3Q3LI67 103 aa5.66□□□□□ -1.5
CHD2-229ENST00000637789 SERP2Q8N6R1 65 aa5.66□□□□□ -1.5
CHD2-229ENST00000637789 UBL5Q9BZL1 73 aa5.66□□□□□ -1.5
CHD2-229ENST00000637789 C14orf132Q9NPU4 83 aa5.66□□□□□ -1.5
CHD2-229ENST00000637789 KRTAP20-1Q3LI63 56 aa5.65□□□□□ -1.5
CHD2-229ENST00000637789 LINC00269Q8N2A0 174 aa5.65□□□□□ -1.5
CHD2-229ENST00000637789 SMIM20Q8N5G0 67 aa5.65□□□□□ -1.5
CHD2-229ENST00000637789 KRTAP4-16G5E9R7 235 aaPredicted RBP5.64□□□□□ -1.51
CHD2-229ENST00000637789 M0R2T5 61 aa5.64□□□□□ -1.51
CHD2-229ENST00000637789 C15orf56Q8N910 161 aa5.64□□□□□ -1.51
CHD2-229ENST00000637789 J3KT08 172 aa5.63□□□□□ -1.51
CHD2-229ENST00000637789 TMEM258P61165 79 aa5.63□□□□□ -1.51
CHD2-229ENST00000637789 RBM3P98179 157 aaKnown RBP5.63□□□□□ -1.51
CHD2-229ENST00000637789 REG3AQ06141 175 aa5.63□□□□□ -1.51
CHD2-229ENST00000637789 CHCHD10Q8WYQ3 142 aaPredicted RBP5.63□□□□□ -1.51
CHD2-229ENST00000637789 LINC00846Q9NV44 126 aa5.63□□□□□ -1.51
CHD2-229ENST00000637789 LOC110117498A0A087WWA1 95 aa5.62□□□□□ -1.51
CHD2-229ENST00000637789 A0A1W2PNN7 141 aa5.62□□□□□ -1.51
CHD2-229ENST00000637789 NDUFC2-KCTD14E9PQ53 114 aa5.62□□□□□ -1.51
CHD2-229ENST00000637789 ZNF561-AS1K7EIQ3 104 aa5.62□□□□□ -1.51
CHD2-229ENST00000637789 NCR3O14931 201 aa5.62□□□□□ -1.51
CHD2-229ENST00000637789 SEC61BP60468 96 aaKnown RBP5.62□□□□□ -1.51
CHD2-229ENST00000637789 KIAA0087Q14695 138 aa5.62□□□□□ -1.51
CHD2-229ENST00000637789 HIGD2BQ4VC39 106 aa5.62□□□□□ -1.51
CHD2-229ENST00000637789 GVQW2A0A096LPI5 108 aaPredicted RBP5.61□□□□□ -1.51
CHD2-229ENST00000637789 TRBV7-6A0A0J9YX20 115 aa5.61□□□□□ -1.51
CHD2-229ENST00000637789 FLGP20930 4061 aaPredicted RBP5.61□□□□□ -1.51
CHD2-229ENST00000637789 LINC00575Q6W349 94 aa5.61□□□□□ -1.51
CHD2-229ENST00000637789 C2orf48Q96LS8 159 aa5.61□□□□□ -1.51
CHD2-229ENST00000637789 IGKV3D-7A0A0C4DH55 119 aa5.6□□□□□ -1.51
CHD2-229ENST00000637789 F8WDY8 70 aa5.6□□□□□ -1.51
CHD2-229ENST00000637789 DSCR8Q96T75 97 aa5.6□□□□□ -1.51
CHD2-229ENST00000637789 PHF5AQ7RTV0 110 aaKnown RBP5.59□□□□□ -1.51
CHD2-229ENST00000637789 LAMTOR3Q9UHA4 124 aa5.59□□□□□ -1.51
CHD2-229ENST00000637789 SPAG11BQ08648 103 aa5.58□□□□□ -1.52
CHD2-229ENST00000637789 C6orf99Q4VX62 202 aa5.58□□□□□ -1.52
CHD2-229ENST00000637789 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.58□□□□□ -1.52
CHD2-229ENST00000637789 LOC107984640A0A0U1RRK4 108 aa5.57□□□□□ -1.52
CHD2-229ENST00000637789 IGLV6-57P01721 117 aa5.57□□□□□ -1.52
CHD2-229ENST00000637789 PKIGQ9Y2B9 76 aa5.57□□□□□ -1.52
CHD2-229ENST00000637789 MUC12Q9UKN1 5478 aa5.57□□□□□ -1.52
CHD2-229ENST00000637789 A0A087X002 238 aa5.56□□□□□ -1.52
CHD2-229ENST00000637789 CXCL6P80162 114 aa5.56□□□□□ -1.52
CHD2-229ENST00000637789 KRTAP11-1Q8IUC1 163 aa5.56□□□□□ -1.52
CHD2-229ENST00000637789 TYMSOSQ8TAI1 123 aa5.56□□□□□ -1.52
CHD2-229ENST00000637789 COX7BP24311 80 aa5.55□□□□□ -1.52
CHD2-229ENST00000637789 C9orf116Q5BN46 136 aaPredicted RBP5.55□□□□□ -1.52
CHD2-229ENST00000637789 C9orf129Q5T035 196 aaKnown RBP5.55□□□□□ -1.52
CHD2-229ENST00000637789 Q6ZQT0 140 aa5.55□□□□□ -1.52
CHD2-229ENST00000637789 TRAV7A0A075B6U4 112 aa5.54□□□□□ -1.52
CHD2-229ENST00000637789 TRAV23DV6A0A075B6W5 121 aa5.54□□□□□ -1.52
CHD2-229ENST00000637789 M0R378 163 aa5.54□□□□□ -1.52
CHD2-229ENST00000637789 KRTAP13-3Q3SY46 172 aa5.54□□□□□ -1.52
CHD2-229ENST00000637789 A0A1B0GW54 56 aa5.53□□□□□ -1.52
CHD2-229ENST00000637789 NDUFC1O43677 76 aa5.53□□□□□ -1.52
CHD2-229ENST00000637789 UNQ6190/PRO20217Q6UXQ8 127 aa5.53□□□□□ -1.52
CHD2-229ENST00000637789 ZNF73O43830 326 aaPredicted RBP5.52□□□□□ -1.53
CHD2-229ENST00000637789 A0A087WVE0 104 aa5.51□□□□□ -1.53
CHD2-229ENST00000637789 C5orf47Q569G3 176 aa5.51□□□□□ -1.53
CHD2-229ENST00000637789 ELOF1P60002 83 aaKnown RBP5.5□□□□□ -1.53
CHD2-229ENST00000637789 Q6ZQY7 126 aa5.5□□□□□ -1.53
CHD2-229ENST00000637789 LINC00304Q8N9R0 145 aa5.5□□□□□ -1.53
CHD2-229ENST00000637789 CAMK2N2Q96S95 79 aa5.5□□□□□ -1.53
CHD2-229ENST00000637789 TRBV7-4A0A0J9YYF1 115 aa5.49□□□□□ -1.53
CHD2-229ENST00000637789 ATP5EP56381 51 aaPredicted RBP5.49□□□□□ -1.53
CHD2-229ENST00000637789 Q6ZVQ6 151 aa5.49□□□□□ -1.53
CHD2-229ENST00000637789 FAM19A5Q7Z5A7 132 aaPredicted RBP5.49□□□□□ -1.53
CHD2-229ENST00000637789 ERC2-IT1O76042 136 aa5.48□□□□□ -1.53
CHD2-229ENST00000637789 C10orf25Q5T742 122 aa5.48□□□□□ -1.53
CHD2-229ENST00000637789 FAM19A1Q7Z5A9 133 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms