RNA–Protein interactions for RNA: ENST00000637789.1

CHD2-229, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-229ENST00000637789 NISCHQ9Y2I1 1504 aa26.01■■□□□ 1.75
CHD2-229ENST00000637789 ABCC9O60706 1549 aa25.07■■□□□ 1.6
CHD2-229ENST00000637789 DNAJC5BQ9UF47 199 aa24.63■■□□□ 1.53
CHD2-229ENST00000637789 CCDC180Q9P1Z9 1646 aa23.84■■□□□ 1.41
CHD2-229ENST00000637789 DNAJC5Q9H3Z4 198 aa23.46■■□□□ 1.35
CHD2-229ENST00000637789 RB1CC1Q8TDY2 1594 aa23.29■■□□□ 1.32
CHD2-229ENST00000637789 PABPN1Q86U42 306 aaKnown RBP eCLIP23.16■■□□□ 1.3
CHD2-229ENST00000637789 NACADO15069 1562 aa22.83■■□□□ 1.25
CHD2-229ENST00000637789 UNC13AQ9UPW8 1703 aa22.79■■□□□ 1.24
CHD2-229ENST00000637789 CECR2Q9BXF3 1484 aa22.7■■□□□ 1.22
CHD2-229ENST00000637789 BICRAQ9NZM4 1560 aa22.7■■□□□ 1.22
CHD2-229ENST00000637789 CC2D2AQ9P2K1 1620 aa22.57■■□□□ 1.2
CHD2-229ENST00000637789 DCAF8L2P0C7V8 631 aa22.49■■□□□ 1.19
CHD2-229ENST00000637789 EIF4G1Q04637 1599 aaKnown RBP22.22■■□□□ 1.15
CHD2-229ENST00000637789 SHROOM4Q9ULL8 1493 aa22.2■■□□□ 1.14
CHD2-229ENST00000637789 MYO15BQ96JP2 1530 aa22.1■■□□□ 1.13
CHD2-229ENST00000637789 CUX2O14529 1486 aa22.08■■□□□ 1.12
CHD2-229ENST00000637789 TRIM41Q8WV44 630 aa21.95■■□□□ 1.1
CHD2-229ENST00000637789 ERCC6Q03468 1493 aa21.71■■□□□ 1.07
CHD2-229ENST00000637789 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
CHD2-229ENST00000637789 DCAF1Q9Y4B6 1507 aa21.38■■□□□ 1.01
CHD2-229ENST00000637789 ZCCHC6Q5VYS8 1495 aaKnown RBP21.3■■□□□ 1
CHD2-229ENST00000637789 THOC2Q8NI27 1593 aaKnown RBP21.22■□□□□ 0.99
CHD2-229ENST00000637789 NESP48681 1621 aa21.2■□□□□ 0.98
CHD2-229ENST00000637789 NCAPD3P42695 1498 aa21.11■□□□□ 0.97
CHD2-229ENST00000637789 SMARCA2P51531 1590 aa20.99■□□□□ 0.95
CHD2-229ENST00000637789 AEBP2Q6ZN18 517 aaPredicted RBP20.92■□□□□ 0.94
CHD2-229ENST00000637789 BAZ1AQ9NRL2 1556 aaPredicted RBP20.89■□□□□ 0.94
CHD2-229ENST00000637789 ATAD2BQ9ULI0 1458 aa20.88■□□□□ 0.93
CHD2-229ENST00000637789 KIF21AQ7Z4S6 1674 aa20.87■□□□□ 0.93
CHD2-229ENST00000637789 OSCARQ8IYS5 282 aa20.86■□□□□ 0.93
CHD2-229ENST00000637789 HMGXB3Q12766 1538 aa20.83■□□□□ 0.92
CHD2-229ENST00000637789 LAMC3Q9Y6N6 1575 aa20.81■□□□□ 0.92
CHD2-229ENST00000637789 RIMBP3CA6NJZ7 1639 aa20.75■□□□□ 0.91
CHD2-229ENST00000637789 RIMBP3BA6NNM3 1639 aa20.75■□□□□ 0.91
CHD2-229ENST00000637789 RIMBP3Q9UFD9 1639 aa20.75■□□□□ 0.91
CHD2-229ENST00000637789 PDS5BQ9NTI5 1447 aa20.73■□□□□ 0.91
CHD2-229ENST00000637789 MRC2Q9UBG0 1479 aa20.64■□□□□ 0.89
CHD2-229ENST00000637789 TRHP20396 242 aaPredicted RBP20.64■□□□□ 0.89
CHD2-229ENST00000637789 WDR62O43379 1518 aa20.63■□□□□ 0.89
CHD2-229ENST00000637789 BAZ1BQ9UIG0 1483 aaKnown RBP20.6■□□□□ 0.89
CHD2-229ENST00000637789 ARHGEF11O15085 1522 aa20.56■□□□□ 0.88
CHD2-229ENST00000637789 SMARCA4P51532 1647 aa20.55■□□□□ 0.88
CHD2-229ENST00000637789 CYB5RLQ6IPT4 315 aa20.48■□□□□ 0.87
CHD2-229ENST00000637789 CADPSQ9ULU8 1353 aa20.4■□□□□ 0.86
CHD2-229ENST00000637789 PEG3Q9GZU2 1588 aa20.34■□□□□ 0.85
CHD2-229ENST00000637789 CEP164Q9UPV0 1460 aa20.31■□□□□ 0.84
CHD2-229ENST00000637789 ILDR1Q86SU0 546 aaPredicted RBP20.29■□□□□ 0.84
CHD2-229ENST00000637789 ARAP1Q96P48 1450 aa20.28■□□□□ 0.84
CHD2-229ENST00000637789 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
CHD2-229ENST00000637789 URB2Q14146 1524 aaKnown RBP20.12■□□□□ 0.81
CHD2-229ENST00000637789 ZNF608Q9ULD9 1512 aaPredicted RBP20.07■□□□□ 0.8
CHD2-229ENST00000637789 MROH2BQ7Z745 1585 aa20.04■□□□□ 0.8
CHD2-229ENST00000637789 RSF1Q96T23 1441 aaPredicted RBP20.02■□□□□ 0.8
CHD2-229ENST00000637789 CHD1O14646 1710 aa19.96■□□□□ 0.79
CHD2-229ENST00000637789 IFT140Q96RY7 1462 aa19.95■□□□□ 0.78
CHD2-229ENST00000637789 CFTRP13569 1480 aa19.92■□□□□ 0.78
CHD2-229ENST00000637789 EIF4G3O43432 1585 aaKnown RBP19.88■□□□□ 0.77
CHD2-229ENST00000637789 FBLN2P98095 1184 aa19.83■□□□□ 0.77
CHD2-229ENST00000637789 WIZO95785 1651 aa19.75■□□□□ 0.75
CHD2-229ENST00000637789 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.752e-8■■■■□ 20.7
CHD2-229ENST00000637789 CLASP1Q7Z460 1538 aa19.71■□□□□ 0.75
CHD2-229ENST00000637789 TOPBP1Q92547 1522 aa19.67■□□□□ 0.74
CHD2-229ENST00000637789 KDM4FA0A1W2PPD8 638 aa19.65■□□□□ 0.74
CHD2-229ENST00000637789 TARBP1Q13395 1621 aaKnown RBP19.6■□□□□ 0.73
CHD2-229ENST00000637789 GAPVD1Q14C86 1478 aa19.6■□□□□ 0.73
CHD2-229ENST00000637789 PRDM2Q13029 1718 aa19.59■□□□□ 0.73
CHD2-229ENST00000637789 SYNJ1O43426 1573 aa19.56■□□□□ 0.72
CHD2-229ENST00000637789 ABCC8Q09428 1581 aa19.5■□□□□ 0.71
CHD2-229ENST00000637789 KIF13AQ9H1H9 1805 aa19.48■□□□□ 0.71
CHD2-229ENST00000637789 SNAPC4Q5SXM2 1469 aa19.48■□□□□ 0.71
CHD2-229ENST00000637789 DNMBPQ6XZF7 1577 aa19.48■□□□□ 0.71
CHD2-229ENST00000637789 CHMP7Q8WUX9 453 aaPredicted RBP19.47■□□□□ 0.71
CHD2-229ENST00000637789 TDRD9Q8NDG6 1382 aaKnown RBP19.42■□□□□ 0.7
CHD2-229ENST00000637789 POLA1P09884 1462 aaPredicted RBP19.4■□□□□ 0.7
CHD2-229ENST00000637789 TOP2AP11388 1531 aaKnown RBP19.39■□□□□ 0.69
CHD2-229ENST00000637789 ERCC6L2Q5T890 1561 aa19.37■□□□□ 0.69
CHD2-229ENST00000637789 RAD54L2Q9Y4B4 1467 aa19.37■□□□□ 0.69
CHD2-229ENST00000637789 MAGI1Q96QZ7 1491 aaPredicted RBP19.35■□□□□ 0.69
CHD2-229ENST00000637789 FBXO41Q8TF61 875 aa19.33■□□□□ 0.68
CHD2-229ENST00000637789 SYNJ2O15056 1496 aa19.32■□□□□ 0.68
CHD2-229ENST00000637789 HECW2Q9P2P5 1572 aa19.32■□□□□ 0.68
CHD2-229ENST00000637789 KDM6BO15054 1643 aa19.28■□□□□ 0.68
CHD2-229ENST00000637789 SOGA1O94964 1423 aa19.27■□□□□ 0.68
CHD2-229ENST00000637789 WDR97A6NE52 1622 aa19.26■□□□□ 0.67
CHD2-229ENST00000637789 GRIN2BQ13224 1484 aa19.24■□□□□ 0.67
CHD2-229ENST00000637789 FAM69CQ0P6D2 419 aa19.24■□□□□ 0.67
CHD2-229ENST00000637789 ABCC10Q5T3U5 1492 aa19.21■□□□□ 0.67
CHD2-229ENST00000637789 LMTK3Q96Q04 1460 aa19.21■□□□□ 0.67
CHD2-229ENST00000637789 CCDC88BA6NC98 1476 aa19.2■□□□□ 0.66
CHD2-229ENST00000637789 ADGRL1O94910 1474 aa19.19■□□□□ 0.66
CHD2-229ENST00000637789 CEP170Q5SW79 1584 aa19.16■□□□□ 0.66
CHD2-229ENST00000637789 DIP2BQ9P265 1576 aa19.13■□□□□ 0.65
CHD2-229ENST00000637789 FGD5Q6ZNL6 1462 aa19.1■□□□□ 0.65
CHD2-229ENST00000637789 PBRM1Q86U86 1689 aa19.09■□□□□ 0.65
CHD2-229ENST00000637789 SOCS7O14512 581 aa19.07■□□□□ 0.64
CHD2-229ENST00000637789 MAPKBP1O60336 1514 aa19.05■□□□□ 0.64
CHD2-229ENST00000637789 TSPOAP1O95153 1857 aa19.04■□□□□ 0.64
CHD2-229ENST00000637789 SHROOM2Q13796 1616 aa19.03■□□□□ 0.64
CHD2-229ENST00000637789 ILDR2Q71H61 639 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms