RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 PLECQ15149 4684 aaKnown RBP7.43□□□□□ -1.22
CLN6-217ENST00000636964 NREPQ16612 68 aa7.43□□□□□ -1.22
CLN6-217ENST00000636964 Q8N9L7 120 aa7.42□□□□□ -1.22
CLN6-217ENST00000636964 Q5VV11 94 aa7.42□□□□□ -1.22
CLN6-217ENST00000636964 C1orf64Q8NEQ6 169 aa7.42□□□□□ -1.22
CLN6-217ENST00000636964 KRTAP3-3Q9BYR6 98 aa7.42□□□□□ -1.22
CLN6-217ENST00000636964 KRTAP3-2Q9BYR7 98 aa7.42□□□□□ -1.22
CLN6-217ENST00000636964 Q6ZQY7 126 aa7.41□□□□□ -1.22
CLN6-217ENST00000636964 FAM168BA1KXE4 195 aa7.41□□□□□ -1.22
CLN6-217ENST00000636964 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.4□□□□□ -1.22
CLN6-217ENST00000636964 PRR4Q16378 134 aa7.4□□□□□ -1.22
CLN6-217ENST00000636964 DYNC2H1Q8NCM8 4307 aaKnown RBP7.4□□□□□ -1.23
CLN6-217ENST00000636964 STARD9Q9P2P6 4700 aa7.4□□□□□ -1.23
CLN6-217ENST00000636964 A6NED7 52 aa7.4□□□□□ -1.23
CLN6-217ENST00000636964 BPY2O14599 106 aa7.39□□□□□ -1.23
CLN6-217ENST00000636964 FBN3Q75N90 2809 aa7.38□□□□□ -1.23
CLN6-217ENST00000636964 NBDYA0A0U1RRE5 68 aa7.38□□□□□ -1.23
CLN6-217ENST00000636964 PRAC1Q96KF2 57 aa7.37□□□□□ -1.23
CLN6-217ENST00000636964 OCR1Q9BZK8 76 aa7.37□□□□□ -1.23
CLN6-217ENST00000636964 RPL37AP8A6NKH3 93 aa7.37□□□□□ -1.23
CLN6-217ENST00000636964 TLX1NBP0CAT3 122 aa7.37□□□□□ -1.23
CLN6-217ENST00000636964 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.37□□□□□ -1.23
CLN6-217ENST00000636964 IGKV4-1P06312 121 aa7.36□□□□□ -1.23
CLN6-217ENST00000636964 C7orf33Q8WU49 177 aa7.36□□□□□ -1.23
CLN6-217ENST00000636964 IGKV2-24A0A0C4DH68 120 aa7.36□□□□□ -1.23
CLN6-217ENST00000636964 H0Y9J4 135 aa7.36□□□□□ -1.23
CLN6-217ENST00000636964 KRTAP7-1Q8IUC3 87 aa7.35□□□□□ -1.23
CLN6-217ENST00000636964 SRRM2Q9UQ35 2752 aaKnown RBP7.35□□□□□ -1.23
CLN6-217ENST00000636964 HIGD2AQ9BW72 106 aa7.35□□□□□ -1.23
CLN6-217ENST00000636964 COX7BP24311 80 aa7.34□□□□□ -1.23
CLN6-217ENST00000636964 ERC2-IT1O76042 136 aa7.34□□□□□ -1.23
CLN6-217ENST00000636964 PRR15LQ9BU68 103 aa7.34□□□□□ -1.24
CLN6-217ENST00000636964 A0A096LNI7 61 aa7.33□□□□□ -1.24
CLN6-217ENST00000636964 ELOF1P60002 83 aaKnown RBP7.32□□□□□ -1.24
CLN6-217ENST00000636964 PDE6GP18545 87 aa7.31□□□□□ -1.24
CLN6-217ENST00000636964 Q6ZRN7 208 aaPredicted RBP7.31□□□□□ -1.24
CLN6-217ENST00000636964 CHTF8P0CG12 524 aa7.3□□□□□ -1.24
CLN6-217ENST00000636964 CNBPP62633 177 aaKnown RBP7.3□□□□□ -1.24
CLN6-217ENST00000636964 PLA2G2DQ9UNK4 145 aa7.3□□□□□ -1.24
CLN6-217ENST00000636964 KCNQ1DNQ9H478 68 aa7.29□□□□□ -1.24
CLN6-217ENST00000636964 LINC00528Q8N1L1 170 aa7.29□□□□□ -1.24
CLN6-217ENST00000636964 IGLV1-50A0A075B6I6 118 aa7.29□□□□□ -1.24
CLN6-217ENST00000636964 A0A1W2PNN7 141 aa7.29□□□□□ -1.24
CLN6-217ENST00000636964 C14orf177Q52M58 125 aa7.29□□□□□ -1.24
CLN6-217ENST00000636964 MOBPQ13875 183 aa7.28□□□□□ -1.24
CLN6-217ENST00000636964 KRTAP21-3Q3LHN1 58 aa7.28□□□□□ -1.24
CLN6-217ENST00000636964 LIMD2Q9BT23 127 aa7.28□□□□□ -1.24
CLN6-217ENST00000636964 VPS13DQ5THJ4 4388 aa7.28□□□□□ -1.24
CLN6-217ENST00000636964 KMT2AQ03164 3969 aa7.28□□□□□ -1.24
CLN6-217ENST00000636964 CYP4F30PQ9H0H9 118 aa7.27□□□□□ -1.24
CLN6-217ENST00000636964 LY6G6CO95867 125 aa7.27□□□□□ -1.25
CLN6-217ENST00000636964 CDC42SE1Q9NRR8 79 aa7.27□□□□□ -1.25
CLN6-217ENST00000636964 IGLV5-37A0A075B6J1 123 aa7.27□□□□□ -1.25
CLN6-217ENST00000636964 RETNLBQ9BQ08 111 aa7.27□□□□□ -1.25
CLN6-217ENST00000636964 DEFB105AQ8NG35 78 aa7.25□□□□□ -1.25
CLN6-217ENST00000636964 FAM30AQ9NZY2 134 aa7.25□□□□□ -1.25
CLN6-217ENST00000636964 C9orf163Q8N9P6 203 aa7.25□□□□□ -1.25
CLN6-217ENST00000636964 ETDCA0A1B0GVM5 59 aa7.24□□□□□ -1.25
CLN6-217ENST00000636964 C3orf84H3BNL1 204 aa7.24□□□□□ -1.25
CLN6-217ENST00000636964 SMIM29Q86T20 159 aa7.24□□□□□ -1.25
CLN6-217ENST00000636964 LCE6AA0A183 80 aa7.24□□□□□ -1.25
CLN6-217ENST00000636964 PANO1I0J062 215 aa7.23□□□□□ -1.25
CLN6-217ENST00000636964 Q6ZR54 194 aa7.23□□□□□ -1.25
CLN6-217ENST00000636964 A0A087WTM6 91 aa7.23□□□□□ -1.25
CLN6-217ENST00000636964 KRTAP4-16G5E9R7 235 aaPredicted RBP7.23□□□□□ -1.25
CLN6-217ENST00000636964 Q9BRP9 147 aa7.23□□□□□ -1.25
CLN6-217ENST00000636964 Q6ZRX8 168 aa7.22□□□□□ -1.25
CLN6-217ENST00000636964 ZCCHC13Q8WW36 166 aaKnown RBP7.22□□□□□ -1.25
CLN6-217ENST00000636964 REG3GQ6UW15 175 aa7.21□□□□□ -1.25
CLN6-217ENST00000636964 ADM2Q7Z4H4 148 aa7.21□□□□□ -1.25
CLN6-217ENST00000636964 SPRR1AP35321 89 aa7.21□□□□□ -1.26
CLN6-217ENST00000636964 H3BQ85 93 aa7.21□□□□□ -1.26
CLN6-217ENST00000636964 KRTAP11-1Q8IUC1 163 aa7.21□□□□□ -1.26
CLN6-217ENST00000636964 Q8N9P0 234 aaPredicted RBP7.21□□□□□ -1.26
CLN6-217ENST00000636964 ST20-AS1Q8NBB2 130 aa7.21□□□□□ -1.26
CLN6-217ENST00000636964 J3QL48 77 aa7.2□□□□□ -1.26
CLN6-217ENST00000636964 WWC2-AS2Q96NR7 200 aa7.2□□□□□ -1.26
CLN6-217ENST00000636964 Q75L30 129 aa7.2□□□□□ -1.26
CLN6-217ENST00000636964 IGHV6-1A0A0B4J1U7 121 aa7.19□□□□□ -1.26
CLN6-217ENST00000636964 DNAH2Q9P225 4427 aa7.19□□□□□ -1.26
CLN6-217ENST00000636964 PRLHP81277 87 aa7.19□□□□□ -1.26
CLN6-217ENST00000636964 C1orf134Q5TEV5 83 aa7.19□□□□□ -1.26
CLN6-217ENST00000636964 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.18□□□□□ -1.26
CLN6-217ENST00000636964 CASC2Q6XLA1 102 aa7.18□□□□□ -1.26
CLN6-217ENST00000636964 Q8N377 158 aa7.18□□□□□ -1.26
CLN6-217ENST00000636964 DHRS4-AS1Q9P1J3 65 aa7.18□□□□□ -1.26
CLN6-217ENST00000636964 LINC00476Q8WZB0 136 aa7.17□□□□□ -1.26
CLN6-217ENST00000636964 RTL8CO15255 209 aa7.16□□□□□ -1.26
CLN6-217ENST00000636964 A0A1W2PNM2 257 aa7.15□□□□□ -1.27
CLN6-217ENST00000636964 TNP2Q05952 138 aa7.14□□□□□ -1.27
CLN6-217ENST00000636964 DSCR10P59022 87 aa7.13□□□□□ -1.27
CLN6-217ENST00000636964 SPACA4Q8TDM5 124 aa7.12□□□□□ -1.27
CLN6-217ENST00000636964 IGLV5-52A0A0A0MRZ9 124 aa7.12□□□□□ -1.27
CLN6-217ENST00000636964 IGLV5-48A0A075B6I7 105 aa7.12□□□□□ -1.27
CLN6-217ENST00000636964 LOC101927531A0A1B0GV80 90 aa7.12□□□□□ -1.27
CLN6-217ENST00000636964 HECTD4Q9Y4D8 3996 aa7.12□□□□□ -1.27
CLN6-217ENST00000636964 K7EQZ3 153 aa7.11□□□□□ -1.27
CLN6-217ENST00000636964 PLA2G1BP04054 148 aaKnown RBP7.09□□□□□ -1.27
CLN6-217ENST00000636964 LINC00208Q96KT6 92 aa7.09□□□□□ -1.27
CLN6-217ENST00000636964 A0A0G2JQZ4 141 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 280.1 ms