RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 SEC61BP60468 96 aaKnown RBP5.12□□□□□ -1.59
GPC3-204ENST00000631057 Q8N9L7 120 aa5.12□□□□□ -1.59
GPC3-204ENST00000631057 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
GPC3-204ENST00000631057 KRTAP1-5Q9BYS1 174 aa5.12□□□□□ -1.59
GPC3-204ENST00000631057 PKIGQ9Y2B9 76 aa5.12□□□□□ -1.59
GPC3-204ENST00000631057 STAB2Q8WWQ8 2551 aa5.11□□□□□ -1.59
GPC3-204ENST00000631057 IGKV2-24A0A0C4DH68 120 aa5.11□□□□□ -1.59
GPC3-204ENST00000631057 APLNQ9ULZ1 77 aa5.11□□□□□ -1.59
GPC3-204ENST00000631057 SNURFQ9Y675 71 aa5.11□□□□□ -1.59
GPC3-204ENST00000631057 DYNC2H1Q8NCM8 4307 aaKnown RBP5.1□□□□□ -1.59
GPC3-204ENST00000631057 DNAH9Q9NYC9 4486 aa5.1□□□□□ -1.59
GPC3-204ENST00000631057 SEC61GP60059 68 aa5.1□□□□□ -1.59
GPC3-204ENST00000631057 B9D2Q9BPU9 175 aa5.1□□□□□ -1.59
GPC3-204ENST00000631057 A0A1W2PNN7 141 aa5.09□□□□□ -1.59
GPC3-204ENST00000631057 ATP5EP56381 51 aaPredicted RBP5.09□□□□□ -1.59
GPC3-204ENST00000631057 SMIM29Q86T20 159 aa5.09□□□□□ -1.59
GPC3-204ENST00000631057 TMEM254Q8TBM7 123 aa5.09□□□□□ -1.59
GPC3-204ENST00000631057 LINC00476Q8WZB0 136 aa5.09□□□□□ -1.59
GPC3-204ENST00000631057 OCR1Q9BZK8 76 aa5.09□□□□□ -1.59
GPC3-204ENST00000631057 IGLV8-61A0A075B6I0 122 aa5.08□□□□□ -1.6
GPC3-204ENST00000631057 SERP1Q9Y6X1 66 aa5.08□□□□□ -1.6
GPC3-204ENST00000631057 PRLHP81277 87 aa5.08□□□□□ -1.6
GPC3-204ENST00000631057 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.07□□□□□ -1.6
GPC3-204ENST00000631057 H0Y9J4 135 aa5.07□□□□□ -1.6
GPC3-204ENST00000631057 OXTP01178 125 aa5.07□□□□□ -1.6
GPC3-204ENST00000631057 IGFL1Q6UW32 110 aa5.07□□□□□ -1.6
GPC3-204ENST00000631057 HIGD2AQ9BW72 106 aa5.07□□□□□ -1.6
GPC3-204ENST00000631057 DNAH10Q8IVF4 4471 aa5.07□□□□□ -1.6
GPC3-204ENST00000631057 COL7A1Q02388 2944 aa5.06□□□□□ -1.6
GPC3-204ENST00000631057 FBN3Q75N90 2809 aa5.06□□□□□ -1.6
GPC3-204ENST00000631057 A0A0U1RQV1 116 aa5.05□□□□□ -1.6
GPC3-204ENST00000631057 NUPR2A6NF83 97 aa5.05□□□□□ -1.6
GPC3-204ENST00000631057 EPM2AB3EWF7 344 aa5.05□□□□□ -1.6
GPC3-204ENST00000631057 UBE2AP49459 152 aa5.05□□□□□ -1.6
GPC3-204ENST00000631057 DSCR10P59022 87 aa5.05□□□□□ -1.6
GPC3-204ENST00000631057 LCE1DQ5T752 114 aa5.05□□□□□ -1.6
GPC3-204ENST00000631057 C9orf163Q8N9P6 203 aa5.05□□□□□ -1.6
GPC3-204ENST00000631057 LINC00474Q9P2X8 69 aa5.05□□□□□ -1.6
GPC3-204ENST00000631057 NBDYA0A0U1RRE5 68 aa5.04□□□□□ -1.6
GPC3-204ENST00000631057 CHTF8P0CG12 524 aa5.04□□□□□ -1.6
GPC3-204ENST00000631057 SPRR1BP22528 89 aa5.04□□□□□ -1.6
GPC3-204ENST00000631057 PHF5AQ7RTV0 110 aaKnown RBP5.04□□□□□ -1.6
GPC3-204ENST00000631057 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.04□□□□□ -1.6
GPC3-204ENST00000631057 LCE6AA0A183 80 aa5.03□□□□□ -1.6
GPC3-204ENST00000631057 LRCOL1A6NCL2 159 aa5.03□□□□□ -1.6
GPC3-204ENST00000631057 K7EQZ3 153 aa5.03□□□□□ -1.6
GPC3-204ENST00000631057 HCG22E2RYF7 251 aa5.02□□□□□ -1.61
GPC3-204ENST00000631057 A0A087WSZ3 146 aa5.01□□□□□ -1.61
GPC3-204ENST00000631057 KRTAP11-1Q8IUC1 163 aa5.01□□□□□ -1.61
GPC3-204ENST00000631057 A0A0G2JQZ4 141 aa5□□□□□ -1.61
GPC3-204ENST00000631057 C5orf47Q569G3 176 aa5□□□□□ -1.61
GPC3-204ENST00000631057 Q5XG85 94 aa5□□□□□ -1.61
GPC3-204ENST00000631057 Q6ZRN7 208 aaPredicted RBP5□□□□□ -1.61
GPC3-204ENST00000631057 WWC2-AS2Q96NR7 200 aa5□□□□□ -1.61
GPC3-204ENST00000631057 SMIM26A0A096LP01 95 aa4.99□□□□□ -1.61
GPC3-204ENST00000631057 VPS13DQ5THJ4 4388 aa4.99□□□□□ -1.61
GPC3-204ENST00000631057 LYSTQ99698 3801 aa4.98□□□□□ -1.61
GPC3-204ENST00000631057 TENM2Q9NT68 2774 aa4.98□□□□□ -1.61
GPC3-204ENST00000631057 KRTAP13-1Q8IUC0 172 aa4.98□□□□□ -1.61
GPC3-204ENST00000631057 PLECQ15149 4684 aaKnown RBP4.98□□□□□ -1.61
GPC3-204ENST00000631057 C4orf26Q17RF5 130 aa4.97□□□□□ -1.61
GPC3-204ENST00000631057 SPACA4Q8TDM5 124 aa4.97□□□□□ -1.61
GPC3-204ENST00000631057 DEFB116Q30KQ4 102 aa4.96□□□□□ -1.62
GPC3-204ENST00000631057 ZCCHC13Q8WW36 166 aaKnown RBP4.96□□□□□ -1.62
GPC3-204ENST00000631057 PANO1I0J062 215 aa4.95□□□□□ -1.62
GPC3-204ENST00000631057 WFDC13Q8IUB5 93 aa4.95□□□□□ -1.62
GPC3-204ENST00000631057 A8MWP4 228 aa4.95□□□□□ -1.62
GPC3-204ENST00000631057 HRCT1Q6UXD1 115 aa4.95□□□□□ -1.62
GPC3-204ENST00000631057 PRR15Q8IV56 129 aa4.95□□□□□ -1.62
GPC3-204ENST00000631057 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
GPC3-204ENST00000631057 LINC00472Q9H8W2 130 aa4.95□□□□□ -1.62
GPC3-204ENST00000631057 DNAH7Q8WXX0 4024 aa4.94□□□□□ -1.62
GPC3-204ENST00000631057 CSMD3Q7Z407 3707 aa4.94□□□□□ -1.62
GPC3-204ENST00000631057 A0A087WTM6 91 aa4.94□□□□□ -1.62
GPC3-204ENST00000631057 KRTAP29-1A8MX34 341 aaPredicted RBP4.94□□□□□ -1.62
GPC3-204ENST00000631057 MP68P56378 58 aa4.94□□□□□ -1.62
GPC3-204ENST00000631057 RPL37AP61513 92 aaKnown RBP4.94□□□□□ -1.62
GPC3-204ENST00000631057 ZNF706Q9Y5V0 76 aaPredicted RBP4.94□□□□□ -1.62
GPC3-204ENST00000631057 SRRM2Q9UQ35 2752 aaKnown RBP4.93□□□□□ -1.62
GPC3-204ENST00000631057 CASC2Q6XLA1 102 aa4.93□□□□□ -1.62
GPC3-204ENST00000631057 FP248Q71RG6 208 aaPredicted RBP4.93□□□□□ -1.62
GPC3-204ENST00000631057 NDUFB1O75438 58 aa4.92□□□□□ -1.62
GPC3-204ENST00000631057 LINC00483Q53H64 154 aa4.92□□□□□ -1.62
GPC3-204ENST00000631057 DNAH17Q9UFH2 4485 aa4.92□□□□□ -1.62
GPC3-204ENST00000631057 H3BPC8 53 aa4.91□□□□□ -1.62
GPC3-204ENST00000631057 RTL8CO15255 209 aa4.91□□□□□ -1.62
GPC3-204ENST00000631057 IGLV5-52A0A0A0MRZ9 124 aa4.9□□□□□ -1.63
GPC3-204ENST00000631057 IGLV9-49A0A0B4J1Y8 123 aa4.9□□□□□ -1.63
GPC3-204ENST00000631057 Q6ZR54 194 aa4.9□□□□□ -1.63
GPC3-204ENST00000631057 PLAC8Q9NZF1 115 aa4.9□□□□□ -1.63
GPC3-204ENST00000631057 PRKDCP78527 4128 aaKnown RBP4.9□□□□□ -1.63
GPC3-204ENST00000631057 MEGF8Q7Z7M0 2845 aa4.9□□□□□ -1.63
GPC3-204ENST00000631057 hDV103S1A0JD37 113 aa4.89□□□□□ -1.63
GPC3-204ENST00000631057 H0Y9P7 68 aa4.89□□□□□ -1.63
GPC3-204ENST00000631057 CYP4F30PQ9H0H9 118 aa4.89□□□□□ -1.63
GPC3-204ENST00000631057 HECTD4Q9Y4D8 3996 aa4.89□□□□□ -1.63
GPC3-204ENST00000631057 STARD9Q9P2P6 4700 aa4.88□□□□□ -1.63
GPC3-204ENST00000631057 TRAV22A0A0B4J277 110 aa4.88□□□□□ -1.63
GPC3-204ENST00000631057 MMP24-AS1A0A0U1RRL7 71 aa4.88□□□□□ -1.63
GPC3-204ENST00000631057 FAM229BQ4G0N7 80 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms