RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 SPRR4Q96PI1 79 aa3.45□□□□□ -1.86
NEK3-211ENST00000629912 PLAC8Q9NZF1 115 aa3.45□□□□□ -1.86
NEK3-211ENST00000629912 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.45□□□□□ -1.86
NEK3-211ENST00000629912 ATOX1O00244 68 aa3.44□□□□□ -1.86
NEK3-211ENST00000629912 FUSP35637 526 aaKnown RBP eCLIP3.44□□□□□ -1.86
NEK3-211ENST00000629912 HAMPP81172 84 aa3.44□□□□□ -1.86
NEK3-211ENST00000629912 NREPQ16612 68 aa3.44□□□□□ -1.86
NEK3-211ENST00000629912 Q8NBF4 154 aa3.44□□□□□ -1.86
NEK3-211ENST00000629912 DNAH5Q8TE73 4624 aa3.43□□□□□ -1.86
NEK3-211ENST00000629912 FBN3Q75N90 2809 aa3.43□□□□□ -1.86
NEK3-211ENST00000629912 IGLV5-52A0A0A0MRZ9 124 aa3.43□□□□□ -1.86
NEK3-211ENST00000629912 F8WEM9 126 aa3.43□□□□□ -1.86
NEK3-211ENST00000629912 CRYGAP11844 174 aa3.43□□□□□ -1.86
NEK3-211ENST00000629912 UBE2AP49459 152 aa3.43□□□□□ -1.86
NEK3-211ENST00000629912 C3orf22Q8N5N4 141 aa3.43□□□□□ -1.86
NEK3-211ENST00000629912 HIGD2AQ9BW72 106 aa3.43□□□□□ -1.86
NEK3-211ENST00000629912 FRAS1Q86XX4 4008 aa3.42□□□□□ -1.86
NEK3-211ENST00000629912 TGP01266 2768 aa3.42□□□□□ -1.86
NEK3-211ENST00000629912 A0A087WVE0 104 aa3.41□□□□□ -1.86
NEK3-211ENST00000629912 CCDC179H3BU77 68 aa3.41□□□□□ -1.86
NEK3-211ENST00000629912 UQCRQO14949 82 aa3.41□□□□□ -1.86
NEK3-211ENST00000629912 COX7CP15954 63 aa3.41□□□□□ -1.86
NEK3-211ENST00000629912 LCE2CQ5TA81 110 aa3.41□□□□□ -1.86
NEK3-211ENST00000629912 IGFL1Q6UW32 110 aa3.41□□□□□ -1.86
NEK3-211ENST00000629912 BPY2O14599 106 aa3.4□□□□□ -1.87
NEK3-211ENST00000629912 RPL37AP61513 92 aaKnown RBP3.4□□□□□ -1.87
NEK3-211ENST00000629912 LINC00483Q53H64 154 aa3.4□□□□□ -1.87
NEK3-211ENST00000629912 SMIM20Q8N5G0 67 aa3.4□□□□□ -1.87
NEK3-211ENST00000629912 SERP2Q8N6R1 65 aa3.4□□□□□ -1.87
NEK3-211ENST00000629912 PSORS1C2Q9UIG4 136 aa3.4□□□□□ -1.87
NEK3-211ENST00000629912 PKD1P98161 4303 aa3.4□□□□□ -1.87
NEK3-211ENST00000629912 FAT2Q9NYQ8 4349 aa3.39□□□□□ -1.87
NEK3-211ENST00000629912 ZNF861PO60384 105 aa3.39□□□□□ -1.87
NEK3-211ENST00000629912 ZNF706Q9Y5V0 76 aaPredicted RBP3.39□□□□□ -1.87
NEK3-211ENST00000629912 HYDINQ4G0P3 5121 aa3.39□□□□□ -1.87
NEK3-211ENST00000629912 SACSQ9NZJ4 4579 aa3.39□□□□□ -1.87
NEK3-211ENST00000629912 TRAV7A0A075B6U4 112 aa3.38□□□□□ -1.87
NEK3-211ENST00000629912 IGKV4-1P06312 121 aa3.38□□□□□ -1.87
NEK3-211ENST00000629912 KRTAP10-2P60368 255 aa3.38□□□□□ -1.87
NEK3-211ENST00000629912 SCXQ7RTU7 201 aa3.38□□□□□ -1.87
NEK3-211ENST00000629912 IGLV7-43P04211 117 aa3.37□□□□□ -1.87
NEK3-211ENST00000629912 Q6ZSA8 131 aa3.37□□□□□ -1.87
NEK3-211ENST00000629912 SRRM2Q9UQ35 2752 aaKnown RBP3.37□□□□□ -1.87
NEK3-211ENST00000629912 A0A0G2JQZ4 141 aa3.36□□□□□ -1.87
NEK3-211ENST00000629912 DSCR10P59022 87 aa3.36□□□□□ -1.87
NEK3-211ENST00000629912 C9orf153Q5TBE3 101 aa3.36□□□□□ -1.87
NEK3-211ENST00000629912 CIRBP-AS1Q8TBR5 109 aa3.36□□□□□ -1.87
NEK3-211ENST00000629912 FAM30AQ9NZY2 134 aa3.36□□□□□ -1.87
NEK3-211ENST00000629912 A0A087WSZ3 146 aa3.35□□□□□ -1.87
NEK3-211ENST00000629912 J3QL48 77 aa3.35□□□□□ -1.87
NEK3-211ENST00000629912 LORP23490 312 aaPredicted RBP3.35□□□□□ -1.87
NEK3-211ENST00000629912 KRTAP10-1P60331 282 aa3.35□□□□□ -1.87
NEK3-211ENST00000629912 LINC00472Q9H8W2 130 aa3.35□□□□□ -1.87
NEK3-211ENST00000629912 LRP1BQ9NZR2 4599 aa3.35□□□□□ -1.87
NEK3-211ENST00000629912 J3KT08 172 aa3.34□□□□□ -1.87
NEK3-211ENST00000629912 Q8N9L7 120 aa3.34□□□□□ -1.87
NEK3-211ENST00000629912 LCE6AA0A183 80 aa3.33□□□□□ -1.88
NEK3-211ENST00000629912 LINC00336Q6ZUF6 198 aa3.33□□□□□ -1.88
NEK3-211ENST00000629912 SSBP3-AS1Q7Z2R9 100 aa3.33□□□□□ -1.88
NEK3-211ENST00000629912 OCR1Q9BZK8 76 aa3.33□□□□□ -1.88
NEK3-211ENST00000629912 IGLV9-49A0A0B4J1Y8 123 aa3.32□□□□□ -1.88
NEK3-211ENST00000629912 CD164Q04900 197 aa3.32□□□□□ -1.88
NEK3-211ENST00000629912 A8MWP4 228 aa3.31□□□□□ -1.88
NEK3-211ENST00000629912 K7EQZ3 153 aa3.31□□□□□ -1.88
NEK3-211ENST00000629912 PRR15Q8IV56 129 aa3.31□□□□□ -1.88
NEK3-211ENST00000629912 SS18L2Q9UHA2 77 aa3.31□□□□□ -1.88
NEK3-211ENST00000629912 DYNC1H1Q14204 4646 aaKnown RBP3.31□□□□□ -1.88
NEK3-211ENST00000629912 HCG22E2RYF7 251 aa3.3□□□□□ -1.88
NEK3-211ENST00000629912 KLKP1Q107X0 134 aa3.3□□□□□ -1.88
NEK3-211ENST00000629912 MOBPQ13875 183 aa3.3□□□□□ -1.88
NEK3-211ENST00000629912 DEFB116Q30KQ4 102 aa3.3□□□□□ -1.88
NEK3-211ENST00000629912 FAM229BQ4G0N7 80 aa3.3□□□□□ -1.88
NEK3-211ENST00000629912 C20orf197Q8N268 126 aa3.3□□□□□ -1.88
NEK3-211ENST00000629912 Q96NJ1 140 aa3.3□□□□□ -1.88
NEK3-211ENST00000629912 ANAPC11Q9NYG5 84 aa3.3□□□□□ -1.88
NEK3-211ENST00000629912 KRTAP29-1A8MX34 341 aaPredicted RBP3.29□□□□□ -1.88
NEK3-211ENST00000629912 NDUFC1O43677 76 aa3.29□□□□□ -1.88
NEK3-211ENST00000629912 TMEM258P61165 79 aa3.29□□□□□ -1.88
NEK3-211ENST00000629912 ASB16-AS1Q495Z4 193 aa3.29□□□□□ -1.88
NEK3-211ENST00000629912 CYSTM1Q9H1C7 97 aa3.29□□□□□ -1.88
NEK3-211ENST00000629912 A0A1B0GVY2 172 aa3.28□□□□□ -1.88
NEK3-211ENST00000629912 NDUFB1O75438 58 aa3.28□□□□□ -1.88
NEK3-211ENST00000629912 RPS28P62857 69 aaKnown RBP3.28□□□□□ -1.88
NEK3-211ENST00000629912 C5orf47Q569G3 176 aa3.28□□□□□ -1.88
NEK3-211ENST00000629912 RYR2Q92736 4967 aa3.27□□□□□ -1.89
NEK3-211ENST00000629912 VPS13BQ7Z7G8 4022 aa3.27□□□□□ -1.89
NEK3-211ENST00000629912 A0A0U1RQV1 116 aa3.27□□□□□ -1.89
NEK3-211ENST00000629912 Q5XG85 94 aa3.27□□□□□ -1.89
NEK3-211ENST00000629912 HRCT1Q6UXD1 115 aa3.27□□□□□ -1.89
NEK3-211ENST00000629912 TMEM254Q8TBM7 123 aa3.27□□□□□ -1.89
NEK3-211ENST00000629912 H7BZZ5 65 aa3.26□□□□□ -1.89
NEK3-211ENST00000629912 KRTAP1-4P0C5Y4 121 aa3.26□□□□□ -1.89
NEK3-211ENST00000629912 XP32Q5T750 250 aa3.26□□□□□ -1.89
NEK3-211ENST00000629912 SPINK6Q6UWN8 80 aa3.26□□□□□ -1.89
NEK3-211ENST00000629912 CASC2Q6XLA1 102 aa3.26□□□□□ -1.89
NEK3-211ENST00000629912 APOBP04114 4563 aaKnown RBP3.25□□□□□ -1.89
NEK3-211ENST00000629912 MMP24-AS1A0A0U1RRL7 71 aa3.25□□□□□ -1.89
NEK3-211ENST00000629912 A0A1B0GVX0 72 aa3.25□□□□□ -1.89
NEK3-211ENST00000629912 KRTAP13-2Q52LG2 175 aa3.25□□□□□ -1.89
NEK3-211ENST00000629912 WFDC13Q8IUB5 93 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms