RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 PKHD1P08F94 4074 aa8.77□□□□□ -1
CLTCL1-212ENST00000622493 PRLHP81277 87 aa8.77□□□□□ -1
CLTCL1-212ENST00000622493 C14orf132Q9NPU4 83 aa8.77□□□□□ -1
CLTCL1-212ENST00000622493 TMEM256-PLSCR3K7ERE1 68 aa8.76□□□□□ -1.01
CLTCL1-212ENST00000622493 C1orf137Q5JT78 98 aa8.76□□□□□ -1.01
CLTCL1-212ENST00000622493 KRTAP13-1Q8IUC0 172 aa8.76□□□□□ -1.01
CLTCL1-212ENST00000622493 SERP2Q8N6R1 65 aa8.76□□□□□ -1.01
CLTCL1-212ENST00000622493 LINC00846Q9NV44 126 aa8.76□□□□□ -1.01
CLTCL1-212ENST00000622493 JMJD7-PLA2G4BH0Y9G9 81 aa8.75□□□□□ -1.01
CLTCL1-212ENST00000622493 HAMPP81172 84 aa8.75□□□□□ -1.01
CLTCL1-212ENST00000622493 CCKP06307 115 aa8.74□□□□□ -1.01
CLTCL1-212ENST00000622493 TMEM258P61165 79 aa8.74□□□□□ -1.01
CLTCL1-212ENST00000622493 HIGD2AQ9BW72 106 aa8.74□□□□□ -1.01
CLTCL1-212ENST00000622493 LRP1BQ9NZR2 4599 aa8.74□□□□□ -1.01
CLTCL1-212ENST00000622493 ATP5EP2Q5VTU8 51 aa8.74□□□□□ -1.01
CLTCL1-212ENST00000622493 IGKV3D-7A0A0C4DH55 119 aa8.73□□□□□ -1.01
CLTCL1-212ENST00000622493 ZNF861PO60384 105 aa8.72□□□□□ -1.01
CLTCL1-212ENST00000622493 ERC2-IT1O76042 136 aa8.72□□□□□ -1.01
CLTCL1-212ENST00000622493 IGLV7-43P04211 117 aa8.71□□□□□ -1.01
CLTCL1-212ENST00000622493 IGLV5-48A0A075B6I7 105 aa8.71□□□□□ -1.02
CLTCL1-212ENST00000622493 DYNC1H1Q14204 4646 aaKnown RBP8.71□□□□□ -1.02
CLTCL1-212ENST00000622493 LINC01547P58512 204 aaPredicted RBP8.68□□□□□ -1.02
CLTCL1-212ENST00000622493 C5orf47Q569G3 176 aa8.68□□□□□ -1.02
CLTCL1-212ENST00000622493 ST20-AS1Q8NBB2 130 aa8.68□□□□□ -1.02
CLTCL1-212ENST00000622493 Q8N377 158 aa8.67□□□□□ -1.02
CLTCL1-212ENST00000622493 DEFB105AQ8NG35 78 aa8.67□□□□□ -1.02
CLTCL1-212ENST00000622493 A0A087WVE0 104 aa8.66□□□□□ -1.02
CLTCL1-212ENST00000622493 CDK2AP2O75956 126 aa8.66□□□□□ -1.02
CLTCL1-212ENST00000622493 ZNF706Q9Y5V0 76 aaPredicted RBP8.66□□□□□ -1.02
CLTCL1-212ENST00000622493 LAMTOR3Q9UHA4 124 aa8.65□□□□□ -1.03
CLTCL1-212ENST00000622493 SPRR1BP22528 89 aa8.64□□□□□ -1.03
CLTCL1-212ENST00000622493 RPL37AP61513 92 aaKnown RBP8.64□□□□□ -1.03
CLTCL1-212ENST00000622493 UBL5Q9BZL1 73 aa8.64□□□□□ -1.03
CLTCL1-212ENST00000622493 SMR3BP02814 79 aaPredicted RBP8.62□□□□□ -1.03
CLTCL1-212ENST00000622493 CYSTM1Q9H1C7 97 aa8.62□□□□□ -1.03
CLTCL1-212ENST00000622493 APOBP04114 4563 aaKnown RBP8.61□□□□□ -1.03
CLTCL1-212ENST00000622493 SPRR4Q96PI1 79 aa8.61□□□□□ -1.03
CLTCL1-212ENST00000622493 RBM3P98179 157 aaKnown RBP8.6□□□□□ -1.03
CLTCL1-212ENST00000622493 LINC00483Q53H64 154 aa8.6□□□□□ -1.03
CLTCL1-212ENST00000622493 SMIM29Q86T20 159 aa8.6□□□□□ -1.03
CLTCL1-212ENST00000622493 LOC110117498A0A087WWA1 95 aa8.58□□□□□ -1.04
CLTCL1-212ENST00000622493 PDE6GP18545 87 aa8.57□□□□□ -1.04
CLTCL1-212ENST00000622493 F8WEM9 126 aa8.57□□□□□ -1.04
CLTCL1-212ENST00000622493 SPINK6Q6UWN8 80 aa8.57□□□□□ -1.04
CLTCL1-212ENST00000622493 Q6ZQT0 140 aa8.57□□□□□ -1.04
CLTCL1-212ENST00000622493 DSCR8Q96T75 97 aa8.57□□□□□ -1.04
CLTCL1-212ENST00000622493 TRAV7A0A075B6U4 112 aa8.55□□□□□ -1.04
CLTCL1-212ENST00000622493 FAM229AH3BQW9 127 aa8.55□□□□□ -1.04
CLTCL1-212ENST00000622493 SRRM2Q9UQ35 2752 aaKnown RBP8.55□□□□□ -1.04
CLTCL1-212ENST00000622493 TRBV7-4A0A0J9YYF1 115 aa8.54□□□□□ -1.04
CLTCL1-212ENST00000622493 PLA2G1BP04054 148 aaKnown RBP8.54□□□□□ -1.04
CLTCL1-212ENST00000622493 KRTAP10-4P60372 401 aaPredicted RBP8.54□□□□□ -1.04
CLTCL1-212ENST00000622493 VPS13BQ7Z7G8 4022 aa8.54□□□□□ -1.04
CLTCL1-212ENST00000622493 IGLV8-61A0A075B6I0 122 aa8.54□□□□□ -1.04
CLTCL1-212ENST00000622493 CXCL6P80162 114 aa8.51□□□□□ -1.05
CLTCL1-212ENST00000622493 C20orf197Q8N268 126 aa8.5□□□□□ -1.05
CLTCL1-212ENST00000622493 EPPK1P58107 5090 aaKnown RBP8.5□□□□□ -1.05
CLTCL1-212ENST00000622493 FAM236DA0A1B0GTK5 79 aa8.49□□□□□ -1.05
CLTCL1-212ENST00000622493 OXTP01178 125 aa8.49□□□□□ -1.05
CLTCL1-212ENST00000622493 FAM236CP0DP71 79 aa8.49□□□□□ -1.05
CLTCL1-212ENST00000622493 FAM229BQ4G0N7 80 aa8.49□□□□□ -1.05
CLTCL1-212ENST00000622493 Q6ZVQ6 151 aa8.49□□□□□ -1.05
CLTCL1-212ENST00000622493 ANAPC11Q9NYG5 84 aa8.49□□□□□ -1.05
CLTCL1-212ENST00000622493 FAT1Q14517 4588 aa8.48□□□□□ -1.05
CLTCL1-212ENST00000622493 Q5VSD8 79 aa8.48□□□□□ -1.05
CLTCL1-212ENST00000622493 SERP1Q9Y6X1 66 aa8.48□□□□□ -1.05
CLTCL1-212ENST00000622493 IGLV9-49A0A0B4J1Y8 123 aa8.47□□□□□ -1.05
CLTCL1-212ENST00000622493 KRTAP1-4P0C5Y4 121 aa8.47□□□□□ -1.05
CLTCL1-212ENST00000622493 KLKP1Q107X0 134 aa8.47□□□□□ -1.05
CLTCL1-212ENST00000622493 Q5XG85 94 aa8.47□□□□□ -1.05
CLTCL1-212ENST00000622493 IGFL1Q6UW32 110 aa8.46□□□□□ -1.05
CLTCL1-212ENST00000622493 Q8NBF4 154 aa8.46□□□□□ -1.06
CLTCL1-212ENST00000622493 A0A1B0GW54 56 aa8.45□□□□□ -1.06
CLTCL1-212ENST00000622493 H7BZZ5 65 aa8.45□□□□□ -1.06
CLTCL1-212ENST00000622493 NDUFC1O43677 76 aa8.45□□□□□ -1.06
CLTCL1-212ENST00000622493 HSPG2P98160 4391 aa8.45□□□□□ -1.06
CLTCL1-212ENST00000622493 C4orf26Q17RF5 130 aa8.44□□□□□ -1.06
CLTCL1-212ENST00000622493 Q8N1X5 172 aa8.44□□□□□ -1.06
CLTCL1-212ENST00000622493 RYR1P21817 5038 aa8.44□□□□□ -1.06
CLTCL1-212ENST00000622493 MOBPQ13875 183 aa8.43□□□□□ -1.06
CLTCL1-212ENST00000622493 SSBP3-AS1Q7Z2R9 100 aa8.43□□□□□ -1.06
CLTCL1-212ENST00000622493 A0A087X002 238 aa8.42□□□□□ -1.06
CLTCL1-212ENST00000622493 A0A1W2PNM2 257 aa8.42□□□□□ -1.06
CLTCL1-212ENST00000622493 ATP5EP56381 51 aaPredicted RBP8.42□□□□□ -1.06
CLTCL1-212ENST00000622493 KIAA1109Q2LD37 5005 aa8.41□□□□□ -1.06
CLTCL1-212ENST00000622493 HRCT1Q6UXD1 115 aa8.4□□□□□ -1.07
CLTCL1-212ENST00000622493 KRTAP13-2Q52LG2 175 aa8.39□□□□□ -1.07
CLTCL1-212ENST00000622493 A0A0G2JQZ4 141 aa8.38□□□□□ -1.07
CLTCL1-212ENST00000622493 SMIM26A0A096LP01 95 aa8.37□□□□□ -1.07
CLTCL1-212ENST00000622493 CD164Q04900 197 aa8.35□□□□□ -1.07
CLTCL1-212ENST00000622493 KRTAP17-1Q9BYP8 105 aa8.35□□□□□ -1.07
CLTCL1-212ENST00000622493 TYMSOSQ8TAI1 123 aa8.34□□□□□ -1.07
CLTCL1-212ENST00000622493 SNURFQ9Y675 71 aa8.34□□□□□ -1.07
CLTCL1-212ENST00000622493 NREPQ16612 68 aa8.33□□□□□ -1.08
CLTCL1-212ENST00000622493 PRR26Q8N8Z3 221 aa8.33□□□□□ -1.08
CLTCL1-212ENST00000622493 A0A087WSZ3 146 aa8.32□□□□□ -1.08
CLTCL1-212ENST00000622493 BPY2O14599 106 aa8.31□□□□□ -1.08
CLTCL1-212ENST00000622493 TMEM254Q8TBM7 123 aa8.29□□□□□ -1.08
CLTCL1-212ENST00000622493 C4orf48Q5BLP8 95 aa8.28□□□□□ -1.08
CLTCL1-212ENST00000622493 PRO0628Q9UI54 55 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms