RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 HIST1H2BNQ99877 126 aa8.53□□□□□ -1.04
TARDBP-225ENST00000621715 HIST1H2BMQ99879 126 aa8.53□□□□□ -1.04
TARDBP-225ENST00000621715 A4D1N5 150 aa8.52□□□□□ -1.05
TARDBP-225ENST00000621715 LCE2BO14633 110 aa8.51□□□□□ -1.05
TARDBP-225ENST00000621715 MT2AP02795 61 aa8.51□□□□□ -1.05
TARDBP-225ENST00000621715 IFITM1P13164 125 aa8.5□□□□□ -1.05
TARDBP-225ENST00000621715 CLEC2BQ92478 149 aa8.5□□□□□ -1.05
TARDBP-225ENST00000621715 F8WEM9 126 aa8.49□□□□□ -1.05
TARDBP-225ENST00000621715 LINC00575Q6W349 94 aa8.49□□□□□ -1.05
TARDBP-225ENST00000621715 KRTAP19-1Q8IUB9 90 aa8.49□□□□□ -1.05
TARDBP-225ENST00000621715 Q6ZQY7 126 aa8.48□□□□□ -1.05
TARDBP-225ENST00000621715 NHP2Q9NX24 153 aaKnown RBP8.48□□□□□ -1.05
TARDBP-225ENST00000621715 MT1FP04733 61 aa8.47□□□□□ -1.05
TARDBP-225ENST00000621715 ATOH7Q8N100 152 aa8.47□□□□□ -1.05
TARDBP-225ENST00000621715 Q96NJ1 140 aa8.47□□□□□ -1.05
TARDBP-225ENST00000621715 C20orf202A1L168 122 aa8.46□□□□□ -1.06
TARDBP-225ENST00000621715 SLC7A5P1Q8MH63 180 aa8.46□□□□□ -1.06
TARDBP-225ENST00000621715 TRAV13-2A0A0B4J235 113 aa8.45□□□□□ -1.06
TARDBP-225ENST00000621715 KRTDAPP60985 99 aa8.45□□□□□ -1.06
TARDBP-225ENST00000621715 OCIAD2Q56VL3 154 aa8.45□□□□□ -1.06
TARDBP-225ENST00000621715 Q6JHZ5 121 aa8.45□□□□□ -1.06
TARDBP-225ENST00000621715 C20orf166-AS1Q96NR2 134 aa8.45□□□□□ -1.06
TARDBP-225ENST00000621715 Q6ZVH6 145 aa8.44□□□□□ -1.06
TARDBP-225ENST00000621715 MACF1Q9UPN3 7388 aaKnown RBP8.43□□□□□ -1.06
TARDBP-225ENST00000621715 COPS9Q8WXC6 57 aa8.43□□□□□ -1.06
TARDBP-225ENST00000621715 hADV29S1A0JD25 119 aa8.42□□□□□ -1.06
TARDBP-225ENST00000621715 A8MUU9 505 aa8.42□□□□□ -1.06
TARDBP-225ENST00000621715 H3BUT2 72 aa8.42□□□□□ -1.06
TARDBP-225ENST00000621715 KRTAP9-3Q9BYQ3 159 aa8.42□□□□□ -1.06
TARDBP-225ENST00000621715 SYNE2Q8WXH0 6885 aaKnown RBP8.42□□□□□ -1.06
TARDBP-225ENST00000621715 KRTAP16-1A8MUX0 517 aa8.41□□□□□ -1.06
TARDBP-225ENST00000621715 LST1O00453 97 aa8.39□□□□□ -1.07
TARDBP-225ENST00000621715 VAMP3Q15836 100 aa8.37□□□□□ -1.07
TARDBP-225ENST00000621715 COA6Q5JTJ3 125 aaKnown RBP8.35□□□□□ -1.07
TARDBP-225ENST00000621715 TRBV20-1A0A075B6N2 111 aa8.34□□□□□ -1.07
TARDBP-225ENST00000621715 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.34□□□□□ -1.07
TARDBP-225ENST00000621715 DSCR10P59022 87 aa8.33□□□□□ -1.08
TARDBP-225ENST00000621715 KRTAP10-10P60014 251 aa8.31□□□□□ -1.08
TARDBP-225ENST00000621715 MPLKIPQ8TAP9 179 aa8.31□□□□□ -1.08
TARDBP-225ENST00000621715 C12orf57Q99622 126 aa8.3□□□□□ -1.08
TARDBP-225ENST00000621715 SNHG12Q9BXW3 62 aa8.3□□□□□ -1.08
TARDBP-225ENST00000621715 HRES1P13985 223 aa8.29□□□□□ -1.08
TARDBP-225ENST00000621715 PPDPFLQ8WWR9 84 aa8.28□□□□□ -1.08
TARDBP-225ENST00000621715 A0A087WSZ3 146 aa8.27□□□□□ -1.09
TARDBP-225ENST00000621715 FAM236DA0A1B0GTK5 79 aa8.26□□□□□ -1.09
TARDBP-225ENST00000621715 FAM236CP0DP71 79 aa8.26□□□□□ -1.09
TARDBP-225ENST00000621715 SS18L2Q9UHA2 77 aa8.25□□□□□ -1.09
TARDBP-225ENST00000621715 NOTCH2NLQ7Z3S9 236 aa8.24□□□□□ -1.09
TARDBP-225ENST00000621715 TEN1Q86WV5 123 aa8.24□□□□□ -1.09
TARDBP-225ENST00000621715 FAM218AQ96MZ4 157 aa8.23□□□□□ -1.09
TARDBP-225ENST00000621715 SCGB1D1O95968 90 aa8.22□□□□□ -1.09
TARDBP-225ENST00000621715 BVES-AS1Q5T3Y7 98 aa8.22□□□□□ -1.09
TARDBP-225ENST00000621715 NDUFV3P56181 108 aaKnown RBP8.2□□□□□ -1.1
TARDBP-225ENST00000621715 SNRPEP62304 92 aaKnown RBP8.2□□□□□ -1.1
TARDBP-225ENST00000621715 KRTAP19-6Q3LI70 58 aa8.2□□□□□ -1.1
TARDBP-225ENST00000621715 A0A1W2PNM2 257 aa8.19□□□□□ -1.1
TARDBP-225ENST00000621715 SIGMAR1Q99720 223 aa8.19□□□□□ -1.1
TARDBP-225ENST00000621715 LINC00313P59037 77 aa8.16□□□□□ -1.1
TARDBP-225ENST00000621715 RBM12B-AS1Q9P1G2 102 aa8.16□□□□□ -1.1
TARDBP-225ENST00000621715 H3BMG7 143 aa8.14□□□□□ -1.11
TARDBP-225ENST00000621715 HIST1H4GQ99525 98 aa8.13□□□□□ -1.11
TARDBP-225ENST00000621715 HIST1H2BLQ99880 126 aa8.13□□□□□ -1.11
TARDBP-225ENST00000621715 IGKV4-1P06312 121 aa8.12□□□□□ -1.11
TARDBP-225ENST00000621715 DEFB116Q30KQ4 102 aa8.12□□□□□ -1.11
TARDBP-225ENST00000621715 HIST3H2BBQ8N257 126 aa8.12□□□□□ -1.11
TARDBP-225ENST00000621715 HSBP1L1C9JCN9 74 aa8.09□□□□□ -1.11
TARDBP-225ENST00000621715 FABP2P12104 132 aa8.07□□□□□ -1.12
TARDBP-225ENST00000621715 A0A1B0GV72 72 aa8.06□□□□□ -1.12
TARDBP-225ENST00000621715 H0YGX0 51 aa8.06□□□□□ -1.12
TARDBP-225ENST00000621715 LINC00472Q9H8W2 130 aa8.06□□□□□ -1.12
TARDBP-225ENST00000621715 COX8AP10176 69 aa8.05□□□□□ -1.12
TARDBP-225ENST00000621715 IGHV6-1A0A0B4J1U7 121 aa8.04□□□□□ -1.12
TARDBP-225ENST00000621715 RAB37Q96AX2 223 aa8.04□□□□□ -1.12
TARDBP-225ENST00000621715 KRTAP6-3Q3LI67 103 aa8.03□□□□□ -1.12
TARDBP-225ENST00000621715 A0A0B4J2C4 111 aa8.02□□□□□ -1.13
TARDBP-225ENST00000621715 TRBV7-4A0A0J9YYF1 115 aa8.02□□□□□ -1.13
TARDBP-225ENST00000621715 LINC00846Q9NV44 126 aa8□□□□□ -1.13
TARDBP-225ENST00000621715 SNCGO76070 127 aa7.99□□□□□ -1.13
TARDBP-225ENST00000621715 S100A2P29034 98 aa7.99□□□□□ -1.13
TARDBP-225ENST00000621715 SPINK7P58062 85 aa7.99□□□□□ -1.13
TARDBP-225ENST00000621715 ANKRD29Q8N6D5 301 aa7.99□□□□□ -1.13
TARDBP-225ENST00000621715 Q8N9P0 234 aaPredicted RBP7.99□□□□□ -1.13
TARDBP-225ENST00000621715 DLEU1O43261 78 aa7.98□□□□□ -1.13
TARDBP-225ENST00000621715 C14orf144Q96I85 54 aa7.98□□□□□ -1.13
TARDBP-225ENST00000621715 A0A1B0GX51 115 aa7.97□□□□□ -1.13
TARDBP-225ENST00000621715 TRIAP1O43715 76 aa7.97□□□□□ -1.13
TARDBP-225ENST00000621715 C2orf91Q6ZV80 131 aa7.97□□□□□ -1.13
TARDBP-225ENST00000621715 ZCCHC13Q8WW36 166 aaKnown RBP7.97□□□□□ -1.13
TARDBP-225ENST00000621715 A0A1B0GVX0 72 aa7.94□□□□□ -1.14
TARDBP-225ENST00000621715 CCKP06307 115 aa7.94□□□□□ -1.14
TARDBP-225ENST00000621715 MTURNQ8N3F0 131 aa7.94□□□□□ -1.14
TARDBP-225ENST00000621715 HIGD1BQ9P298 99 aa7.94□□□□□ -1.14
TARDBP-225ENST00000621715 NEBP20929 6669 aa7.93□□□□□ -1.14
TARDBP-225ENST00000621715 A8MWP4 228 aa7.93□□□□□ -1.14
TARDBP-225ENST00000621715 PRO1854Q9UHT4 67 aa7.92□□□□□ -1.14
TARDBP-225ENST00000621715 FXYD2P54710 66 aa7.91□□□□□ -1.14
TARDBP-225ENST00000621715 C8orf87E5RJ46 101 aa7.9□□□□□ -1.14
TARDBP-225ENST00000621715 GHRHP01286 108 aa7.9□□□□□ -1.14
TARDBP-225ENST00000621715 TRACP01848 142 aa7.9□□□□□ -1.14
TARDBP-225ENST00000621715 WFDC13Q8IUB5 93 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms