RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 MKI67P46013 3256 aaKnown RBP6.16□□□□□ -1.42
COL4A6-210ENST00000621266 BRCA2P51587 3418 aa6.13□□□□□ -1.43
COL4A6-210ENST00000621266 S4R3F8 94 aa6.13□□□□□ -1.43
COL4A6-210ENST00000621266 CFAP46Q8IYW2 2715 aa6.12□□□□□ -1.43
COL4A6-210ENST00000621266 BPTFQ12830 3046 aa6.12□□□□□ -1.43
COL4A6-210ENST00000621266 Q6ZSA8 131 aa6.12□□□□□ -1.43
COL4A6-210ENST00000621266 CHD9Q3L8U1 2897 aa6.12□□□□□ -1.43
COL4A6-210ENST00000621266 Q5W150 140 aa6.12□□□□□ -1.43
COL4A6-210ENST00000621266 ZCCHC13Q8WW36 166 aaKnown RBP6.09□□□□□ -1.43
COL4A6-210ENST00000621266 CENPEQ02224 2701 aa6.09□□□□□ -1.43
COL4A6-210ENST00000621266 RPL37P61927 97 aaKnown RBP6.08□□□□□ -1.44
COL4A6-210ENST00000621266 Q8NDZ9 215 aa6.07□□□□□ -1.44
COL4A6-210ENST00000621266 H1FX-AS1Q4G0G2 97 aa6.05□□□□□ -1.44
COL4A6-210ENST00000621266 SPATA8Q6RVD6 105 aa6.04□□□□□ -1.44
COL4A6-210ENST00000621266 R4GN34 69 aa6.04□□□□□ -1.44
COL4A6-210ENST00000621266 HTTP42858 3142 aa6.04□□□□□ -1.44
COL4A6-210ENST00000621266 XIRP2A4UGR9 3374 aa6.03□□□□□ -1.44
COL4A6-210ENST00000621266 Q5VSD8 79 aa6.03□□□□□ -1.44
COL4A6-210ENST00000621266 ZNF292O60281 2723 aa6.03□□□□□ -1.44
COL4A6-210ENST00000621266 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.03□□□□□ -1.44
COL4A6-210ENST00000621266 RANBP2P49792 3224 aaKnown RBP6.03□□□□□ -1.44
COL4A6-210ENST00000621266 LINC00472Q9H8W2 130 aa6.02□□□□□ -1.45
COL4A6-210ENST00000621266 CDH23Q9H251 3354 aa6.01□□□□□ -1.45
COL4A6-210ENST00000621266 LAMA3Q16787 3333 aa6.01□□□□□ -1.45
COL4A6-210ENST00000621266 ASB16-AS1Q495Z4 193 aa6□□□□□ -1.45
COL4A6-210ENST00000621266 LCE6AA0A183 80 aa5.99□□□□□ -1.45
COL4A6-210ENST00000621266 NDUFAF8A1L188 74 aa5.99□□□□□ -1.45
COL4A6-210ENST00000621266 A6NN06 94 aa5.99□□□□□ -1.45
COL4A6-210ENST00000621266 TRANK1O15050 2925 aa5.98□□□□□ -1.45
COL4A6-210ENST00000621266 KRTAP25-1Q3LHN0 102 aa5.98□□□□□ -1.45
COL4A6-210ENST00000621266 ADM2Q7Z4H4 148 aa5.98□□□□□ -1.45
COL4A6-210ENST00000621266 KRTAP26-1Q6PEX3 210 aa5.96□□□□□ -1.46
COL4A6-210ENST00000621266 M0QZ58 72 aa5.95□□□□□ -1.46
COL4A6-210ENST00000621266 TEP1Q99973 2627 aaKnown RBP5.95□□□□□ -1.46
COL4A6-210ENST00000621266 SPRR1AP35321 89 aa5.94□□□□□ -1.46
COL4A6-210ENST00000621266 MGAQ8IWI9 3026 aa5.93□□□□□ -1.46
COL4A6-210ENST00000621266 STAB1Q9NY15 2570 aa5.93□□□□□ -1.46
COL4A6-210ENST00000621266 PLAC4Q8WY50 150 aa5.91□□□□□ -1.46
COL4A6-210ENST00000621266 PRUNE2Q8WUY3 3088 aa5.91□□□□□ -1.46
COL4A6-210ENST00000621266 TEX15Q9BXT5 2789 aa5.9□□□□□ -1.47
COL4A6-210ENST00000621266 SETXQ7Z333 2677 aaKnown RBP5.89□□□□□ -1.47
COL4A6-210ENST00000621266 KRTAP10-2P60368 255 aa5.89□□□□□ -1.47
COL4A6-210ENST00000621266 C20orf166-AS1Q96NR2 134 aa5.89□□□□□ -1.47
COL4A6-210ENST00000621266 A8MU10 97 aa5.88□□□□□ -1.47
COL4A6-210ENST00000621266 COL6A5A8TX70 2615 aa5.88□□□□□ -1.47
COL4A6-210ENST00000621266 PLAC8Q9NZF1 115 aa5.88□□□□□ -1.47
COL4A6-210ENST00000621266 UNC79Q9P2D8 2635 aa5.88□□□□□ -1.47
COL4A6-210ENST00000621266 SZT2Q5T011 3432 aa5.88□□□□□ -1.47
COL4A6-210ENST00000621266 AKAP13Q12802 2813 aa5.88□□□□□ -1.47
COL4A6-210ENST00000621266 Q6ZR54 194 aa5.88□□□□□ -1.47
COL4A6-210ENST00000621266 KRTAP10-1P60331 282 aa5.87□□□□□ -1.47
COL4A6-210ENST00000621266 CHD6Q8TD26 2715 aa5.87□□□□□ -1.47
COL4A6-210ENST00000621266 SPTBN5Q9NRC6 3674 aaKnown RBP5.86□□□□□ -1.47
COL4A6-210ENST00000621266 SPRR1BP22528 89 aa5.86□□□□□ -1.47
COL4A6-210ENST00000621266 DNAH14Q0VDD8 3507 aa5.85□□□□□ -1.47
COL4A6-210ENST00000621266 IGSF10Q6WRI0 2623 aa5.84□□□□□ -1.48
COL4A6-210ENST00000621266 KRTAP29-1A8MX34 341 aaPredicted RBP5.82□□□□□ -1.48
COL4A6-210ENST00000621266 DSPP15924 2871 aaKnown RBP5.82□□□□□ -1.48
COL4A6-210ENST00000621266 KRTAP1-5Q9BYS1 174 aa5.81□□□□□ -1.48
COL4A6-210ENST00000621266 UNC80Q8N2C7 3258 aa5.81□□□□□ -1.48
COL4A6-210ENST00000621266 CFAP54Q96N23 3096 aa5.81□□□□□ -1.48
COL4A6-210ENST00000621266 NOTCH1P46531 2555 aa5.8□□□□□ -1.48
COL4A6-210ENST00000621266 PANO1I0J062 215 aa5.8□□□□□ -1.48
COL4A6-210ENST00000621266 WDFY4Q6ZS81 3184 aa5.8□□□□□ -1.48
COL4A6-210ENST00000621266 BAHCC1Q9P281 2608 aa5.78□□□□□ -1.48
COL4A6-210ENST00000621266 GCN1Q92616 2671 aaKnown RBP5.77□□□□□ -1.49
COL4A6-210ENST00000621266 A0A0C4DFX4 3053 aa5.76□□□□□ -1.49
COL4A6-210ENST00000621266 A0A087X002 238 aa5.76□□□□□ -1.49
COL4A6-210ENST00000621266 NOTCH2NLQ7Z3S9 236 aa5.76□□□□□ -1.49
COL4A6-210ENST00000621266 CELSR3Q9NYQ7 3312 aa5.76□□□□□ -1.49
COL4A6-210ENST00000621266 NBEAL1Q6ZS30 2694 aa5.75□□□□□ -1.49
COL4A6-210ENST00000621266 A8MUU9 505 aa5.73□□□□□ -1.49
COL4A6-210ENST00000621266 SEC61BP60468 96 aaKnown RBP5.73□□□□□ -1.49
COL4A6-210ENST00000621266 C10orf95Q9H7T3 257 aa5.72□□□□□ -1.49
COL4A6-210ENST00000621266 UBR5O95071 2799 aaPredicted RBP5.71□□□□□ -1.49
COL4A6-210ENST00000621266 COL6A3P12111 3177 aa5.71□□□□□ -1.49
COL4A6-210ENST00000621266 LAMA2P24043 3122 aaKnown RBP5.71□□□□□ -1.5
COL4A6-210ENST00000621266 MAP1AP78559 2803 aaPredicted RBP5.71□□□□□ -1.5
COL4A6-210ENST00000621266 USP34Q70CQ2 3546 aa5.7□□□□□ -1.5
COL4A6-210ENST00000621266 KRTAP4-16G5E9R7 235 aaPredicted RBP5.68□□□□□ -1.5
COL4A6-210ENST00000621266 FLG2Q5D862 2391 aaPredicted RBP5.68□□□□□ -1.5
COL4A6-210ENST00000621266 TRIOO75962 3097 aa5.67□□□□□ -1.5
COL4A6-210ENST00000621266 NBEAL2Q6ZNJ1 2754 aa5.64□□□□□ -1.51
COL4A6-210ENST00000621266 KRTAP11-1Q8IUC1 163 aa5.64□□□□□ -1.51
COL4A6-210ENST00000621266 TNRC18O15417 2968 aaPredicted RBP5.64□□□□□ -1.51
COL4A6-210ENST00000621266 KRTAP21-3Q3LHN1 58 aa5.62□□□□□ -1.51
COL4A6-210ENST00000621266 NSD1Q96L73 2696 aaPredicted RBP5.62□□□□□ -1.51
COL4A6-210ENST00000621266 ITPR2Q14571 2701 aa5.61□□□□□ -1.51
COL4A6-210ENST00000621266 VPS13AQ96RL7 3174 aa5.61□□□□□ -1.51
COL4A6-210ENST00000621266 EYSQ5T1H1 3165 aa5.61□□□□□ -1.51
COL4A6-210ENST00000621266 FLNCQ14315 2725 aa5.61□□□□□ -1.51
COL4A6-210ENST00000621266 ITPR1Q14643 2758 aa5.6□□□□□ -1.51
COL4A6-210ENST00000621266 FRYQ5TBA9 3013 aa5.58□□□□□ -1.52
COL4A6-210ENST00000621266 STAB2Q8WWQ8 2551 aa5.56□□□□□ -1.52
COL4A6-210ENST00000621266 VCANP13611 3396 aa5.56□□□□□ -1.52
COL4A6-210ENST00000621266 Q6ZRN7 208 aaPredicted RBP5.54□□□□□ -1.52
COL4A6-210ENST00000621266 TNP1P09430 55 aa5.53□□□□□ -1.52
COL4A6-210ENST00000621266 DMBT1Q9UGM3 2413 aaPredicted RBP5.53□□□□□ -1.52
COL4A6-210ENST00000621266 ATMQ13315 3056 aa5.51□□□□□ -1.53
COL4A6-210ENST00000621266 TACC2O95359 2948 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms