RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 SMIM20Q8N5G0 67 aa11.78□□□□□ -0.52
PSPC1-206ENST00000619300 CRYGAP11844 174 aa11.77□□□□□ -0.53
PSPC1-206ENST00000619300 KRTAP13-1Q8IUC0 172 aa11.77□□□□□ -0.53
PSPC1-206ENST00000619300 HAMPP81172 84 aa11.76□□□□□ -0.53
PSPC1-206ENST00000619300 F8WEM9 126 aa11.76□□□□□ -0.53
PSPC1-206ENST00000619300 ALMS1Q8TCU4 4167 aa11.75□□□□□ -0.53
PSPC1-206ENST00000619300 A0A1W2PNM2 257 aa11.75□□□□□ -0.53
PSPC1-206ENST00000619300 A0A1B0GW54 56 aa11.74□□□□□ -0.53
PSPC1-206ENST00000619300 SPRR1BP22528 89 aa11.73□□□□□ -0.53
PSPC1-206ENST00000619300 A0A087WVE0 104 aa11.72□□□□□ -0.53
PSPC1-206ENST00000619300 CXCL6P80162 114 aa11.72□□□□□ -0.53
PSPC1-206ENST00000619300 Q8NBF4 154 aa11.72□□□□□ -0.53
PSPC1-206ENST00000619300 IGLV8-61A0A075B6I0 122 aa11.7□□□□□ -0.54
PSPC1-206ENST00000619300 KRTAP10-2P60368 255 aa11.7□□□□□ -0.54
PSPC1-206ENST00000619300 NREPQ16612 68 aa11.7□□□□□ -0.54
PSPC1-206ENST00000619300 SPRR4Q96PI1 79 aa11.69□□□□□ -0.54
PSPC1-206ENST00000619300 PSORS1C2Q9UIG4 136 aa11.69□□□□□ -0.54
PSPC1-206ENST00000619300 SRRM2Q9UQ35 2752 aaKnown RBP11.68□□□□□ -0.54
PSPC1-206ENST00000619300 SERP2Q8N6R1 65 aa11.68□□□□□ -0.54
PSPC1-206ENST00000619300 IGFL1Q6UW32 110 aa11.67□□□□□ -0.54
PSPC1-206ENST00000619300 FRAS1Q86XX4 4008 aa11.64□□□□□ -0.55
PSPC1-206ENST00000619300 A0A0G2JQZ4 141 aa11.64□□□□□ -0.55
PSPC1-206ENST00000619300 RPS28P62857 69 aaKnown RBP11.64□□□□□ -0.55
PSPC1-206ENST00000619300 SCXQ7RTU7 201 aa11.64□□□□□ -0.55
PSPC1-206ENST00000619300 FAM30AQ9NZY2 134 aa11.62□□□□□ -0.55
PSPC1-206ENST00000619300 J3KT08 172 aa11.61□□□□□ -0.55
PSPC1-206ENST00000619300 TMEM258P61165 79 aa11.61□□□□□ -0.55
PSPC1-206ENST00000619300 DNAH11Q96DT5 4516 aa11.6□□□□□ -0.55
PSPC1-206ENST00000619300 ZNF861PO60384 105 aa11.6□□□□□ -0.55
PSPC1-206ENST00000619300 HYDINQ4G0P3 5121 aa11.6□□□□□ -0.55
PSPC1-206ENST00000619300 BPY2O14599 106 aa11.59□□□□□ -0.55
PSPC1-206ENST00000619300 CIRBP-AS1Q8TBR5 109 aa11.59□□□□□ -0.55
PSPC1-206ENST00000619300 DNAH8Q96JB1 4490 aa11.58□□□□□ -0.56
PSPC1-206ENST00000619300 LINC00483Q53H64 154 aa11.57□□□□□ -0.56
PSPC1-206ENST00000619300 ZNF706Q9Y5V0 76 aaPredicted RBP11.57□□□□□ -0.56
PSPC1-206ENST00000619300 KRTAP10-1P60331 282 aa11.56□□□□□ -0.56
PSPC1-206ENST00000619300 Q6ZSA8 131 aa11.55□□□□□ -0.56
PSPC1-206ENST00000619300 DNAH5Q8TE73 4624 aa11.55□□□□□ -0.56
PSPC1-206ENST00000619300 IGLV7-43P04211 117 aa11.53□□□□□ -0.56
PSPC1-206ENST00000619300 FAT2Q9NYQ8 4349 aa11.53□□□□□ -0.56
PSPC1-206ENST00000619300 PKD1P98161 4303 aa11.52□□□□□ -0.57
PSPC1-206ENST00000619300 A0A087WSZ3 146 aa11.52□□□□□ -0.57
PSPC1-206ENST00000619300 Q8N9L7 120 aa11.52□□□□□ -0.57
PSPC1-206ENST00000619300 IGKV4-1P06312 121 aa11.51□□□□□ -0.57
PSPC1-206ENST00000619300 IGLV9-49A0A0B4J1Y8 123 aa11.49□□□□□ -0.57
PSPC1-206ENST00000619300 CYSTM1Q9H1C7 97 aa11.49□□□□□ -0.57
PSPC1-206ENST00000619300 LCE6AA0A183 80 aa11.48□□□□□ -0.57
PSPC1-206ENST00000619300 RPL37AP61513 92 aaKnown RBP11.46□□□□□ -0.57
PSPC1-206ENST00000619300 DSCR10P59022 87 aa11.45□□□□□ -0.58
PSPC1-206ENST00000619300 ANAPC11Q9NYG5 84 aa11.45□□□□□ -0.58
PSPC1-206ENST00000619300 SACSQ9NZJ4 4579 aa11.43□□□□□ -0.58
PSPC1-206ENST00000619300 TRAV7A0A075B6U4 112 aa11.42□□□□□ -0.58
PSPC1-206ENST00000619300 LINC00336Q6ZUF6 198 aa11.42□□□□□ -0.58
PSPC1-206ENST00000619300 DEFB116Q30KQ4 102 aa11.4□□□□□ -0.58
PSPC1-206ENST00000619300 MOBPQ13875 183 aa11.4□□□□□ -0.59
PSPC1-206ENST00000619300 K7EQZ3 153 aa11.38□□□□□ -0.59
PSPC1-206ENST00000619300 LINC00472Q9H8W2 130 aa11.36□□□□□ -0.59
PSPC1-206ENST00000619300 C5orf47Q569G3 176 aa11.34□□□□□ -0.59
PSPC1-206ENST00000619300 LRP1BQ9NZR2 4599 aa11.34□□□□□ -0.59
PSPC1-206ENST00000619300 KLKP1Q107X0 134 aa11.33□□□□□ -0.6
PSPC1-206ENST00000619300 HRCT1Q6UXD1 115 aa11.33□□□□□ -0.6
PSPC1-206ENST00000619300 C20orf197Q8N268 126 aa11.31□□□□□ -0.6
PSPC1-206ENST00000619300 FAM236DA0A1B0GTK5 79 aa11.29□□□□□ -0.6
PSPC1-206ENST00000619300 OXTP01178 125 aa11.29□□□□□ -0.6
PSPC1-206ENST00000619300 FAM236CP0DP71 79 aa11.29□□□□□ -0.6
PSPC1-206ENST00000619300 A0A1B0GVY2 172 aa11.28□□□□□ -0.6
PSPC1-206ENST00000619300 H7BZZ5 65 aa11.27□□□□□ -0.61
PSPC1-206ENST00000619300 A8MWP4 228 aa11.26□□□□□ -0.61
PSPC1-206ENST00000619300 HCG22E2RYF7 251 aa11.26□□□□□ -0.61
PSPC1-206ENST00000619300 SSBP3-AS1Q7Z2R9 100 aa11.26□□□□□ -0.61
PSPC1-206ENST00000619300 OCR1Q9BZK8 76 aa11.26□□□□□ -0.61
PSPC1-206ENST00000619300 NDUFC1O43677 76 aa11.26□□□□□ -0.61
PSPC1-206ENST00000619300 PRR15Q8IV56 129 aa11.26□□□□□ -0.61
PSPC1-206ENST00000619300 Q96NJ1 140 aa11.25□□□□□ -0.61
PSPC1-206ENST00000619300 SERP1Q9Y6X1 66 aa11.25□□□□□ -0.61
PSPC1-206ENST00000619300 PKHD1P08F94 4074 aa11.22□□□□□ -0.61
PSPC1-206ENST00000619300 FAM229BQ4G0N7 80 aa11.22□□□□□ -0.61
PSPC1-206ENST00000619300 CD164Q04900 197 aa11.21□□□□□ -0.61
PSPC1-206ENST00000619300 ATP5EP56381 51 aaPredicted RBP11.21□□□□□ -0.62
PSPC1-206ENST00000619300 Q5XG85 94 aa11.21□□□□□ -0.62
PSPC1-206ENST00000619300 A0A087X002 238 aa11.2□□□□□ -0.62
PSPC1-206ENST00000619300 NDUFB1O75438 58 aa11.18□□□□□ -0.62
PSPC1-206ENST00000619300 KRTAP13-2Q52LG2 175 aa11.18□□□□□ -0.62
PSPC1-206ENST00000619300 WFDC13Q8IUB5 93 aa11.18□□□□□ -0.62
PSPC1-206ENST00000619300 VPS13BQ7Z7G8 4022 aa11.18□□□□□ -0.62
PSPC1-206ENST00000619300 RYR2Q92736 4967 aa11.18□□□□□ -0.62
PSPC1-206ENST00000619300 KRTAP1-4P0C5Y4 121 aa11.18□□□□□ -0.62
PSPC1-206ENST00000619300 KRTAP29-1A8MX34 341 aaPredicted RBP11.16□□□□□ -0.62
PSPC1-206ENST00000619300 DYNC1H1Q14204 4646 aaKnown RBP11.14□□□□□ -0.63
PSPC1-206ENST00000619300 CASC2Q6XLA1 102 aa11.14□□□□□ -0.63
PSPC1-206ENST00000619300 SNURFQ9Y675 71 aa11.14□□□□□ -0.63
PSPC1-206ENST00000619300 TMEM254Q8TBM7 123 aa11.13□□□□□ -0.63
PSPC1-206ENST00000619300 SPINK6Q6UWN8 80 aa11.12□□□□□ -0.63
PSPC1-206ENST00000619300 SMR3BP02814 79 aaPredicted RBP11.11□□□□□ -0.63
PSPC1-206ENST00000619300 KMT2CQ8NEZ4 4911 aaKnown RBP11.11□□□□□ -0.63
PSPC1-206ENST00000619300 PLA2G1BP04054 148 aaKnown RBP11.11□□□□□ -0.63
PSPC1-206ENST00000619300 MMP24-AS1A0A0U1RRL7 71 aa11.09□□□□□ -0.63
PSPC1-206ENST00000619300 CDK2AP2O75956 126 aa11.09□□□□□ -0.63
PSPC1-206ENST00000619300 C4orf26Q17RF5 130 aa11.09□□□□□ -0.63
PSPC1-206ENST00000619300 A0A1B0GVX0 72 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms