RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 RNF213Q63HN8 5207 aa14.35□□□□□ -0.11
PMS1-220ENST00000618056 ELOF1P60002 83 aaKnown RBP14.34□□□□□ -0.11
PMS1-220ENST00000618056 Q8NBF4 154 aa14.33□□□□□ -0.12
PMS1-220ENST00000618056 MTURNQ8N3F0 131 aa14.32□□□□□ -0.12
PMS1-220ENST00000618056 TRBV7-6A0A0J9YX20 115 aa14.31□□□□□ -0.12
PMS1-220ENST00000618056 COX7BP24311 80 aa14.31□□□□□ -0.12
PMS1-220ENST00000618056 C4orf48Q5BLP8 95 aa14.31□□□□□ -0.12
PMS1-220ENST00000618056 ST20-AS1Q8NBB2 130 aa14.31□□□□□ -0.12
PMS1-220ENST00000618056 SSBP3-AS1Q7Z2R9 100 aa14.3□□□□□ -0.12
PMS1-220ENST00000618056 CLEC2BQ92478 149 aa14.3□□□□□ -0.12
PMS1-220ENST00000618056 IGLV9-49A0A0B4J1Y8 123 aa14.29□□□□□ -0.12
PMS1-220ENST00000618056 LST1O00453 97 aa14.29□□□□□ -0.12
PMS1-220ENST00000618056 MOBPQ13875 183 aa14.29□□□□□ -0.12
PMS1-220ENST00000618056 RETNLBQ9BQ08 111 aa14.29□□□□□ -0.12
PMS1-220ENST00000618056 SMIM11BQ8TCY0 68 aa14.28□□□□□ -0.12
PMS1-220ENST00000618056 C9JAW5 83 aa14.26□□□□□ -0.13
PMS1-220ENST00000618056 SPRR1BP22528 89 aa14.26□□□□□ -0.13
PMS1-220ENST00000618056 SPINK1P00995 79 aa14.25□□□□□ -0.13
PMS1-220ENST00000618056 SLC25A20O43772 301 aa14.24□□□□□ -0.13
PMS1-220ENST00000618056 SMCPP49901 116 aaPredicted RBP14.24□□□□□ -0.13
PMS1-220ENST00000618056 OCIAD2Q56VL3 154 aa14.24□□□□□ -0.13
PMS1-220ENST00000618056 H0YGX0 51 aa14.2□□□□□ -0.14
PMS1-220ENST00000618056 ETDBQ3ZM63 59 aa14.2□□□□□ -0.14
PMS1-220ENST00000618056 K7ERU9 68 aa14.19□□□□□ -0.14
PMS1-220ENST00000618056 RPS29P62273 56 aaKnown RBP14.19□□□□□ -0.14
PMS1-220ENST00000618056 C9orf153Q5TBE3 101 aa14.19□□□□□ -0.14
PMS1-220ENST00000618056 TRACP01848 142 aa14.18□□□□□ -0.14
PMS1-220ENST00000618056 H3BT86 120 aa14.18□□□□□ -0.14
PMS1-220ENST00000618056 ANKRD29Q8N6D5 301 aa14.18□□□□□ -0.14
PMS1-220ENST00000618056 IGLV7-46A0A075B6I9 117 aa14.16□□□□□ -0.14
PMS1-220ENST00000618056 TPRXLQ17RH7 258 aa14.15□□□□□ -0.14
PMS1-220ENST00000618056 FP248Q71RG6 208 aaPredicted RBP14.15□□□□□ -0.14
PMS1-220ENST00000618056 TEN1Q86WV5 123 aa14.15□□□□□ -0.14
PMS1-220ENST00000618056 FAM218AQ96MZ4 157 aa14.15□□□□□ -0.14
PMS1-220ENST00000618056 LAMTOR3Q9UHA4 124 aa14.14□□□□□ -0.15
PMS1-220ENST00000618056 TEX49A0A1B0GTD5 131 aa14.12□□□□□ -0.15
PMS1-220ENST00000618056 IGLV5-48A0A075B6I7 105 aa14.11□□□□□ -0.15
PMS1-220ENST00000618056 J3QR89 54 aa14.11□□□□□ -0.15
PMS1-220ENST00000618056 DNAL4O96015 105 aa14.11□□□□□ -0.15
PMS1-220ENST00000618056 DEFB105AQ8NG35 78 aa14.1□□□□□ -0.15
PMS1-220ENST00000618056 LINC01547P58512 204 aaPredicted RBP14.09□□□□□ -0.15
PMS1-220ENST00000618056 Q8N377 158 aa14.09□□□□□ -0.15
PMS1-220ENST00000618056 PPDPFLQ8WWR9 84 aa14.09□□□□□ -0.15
PMS1-220ENST00000618056 A0A1B0GX51 115 aa14.06□□□□□ -0.16
PMS1-220ENST00000618056 SMIM29Q86T20 159 aa14.05□□□□□ -0.16
PMS1-220ENST00000618056 LINC00575Q6W349 94 aa14.04□□□□□ -0.16
PMS1-220ENST00000618056 CDIP1Q9H305 208 aa14.04□□□□□ -0.16
PMS1-220ENST00000618056 SNCGO76070 127 aa14.03□□□□□ -0.16
PMS1-220ENST00000618056 BAALC-AS2P0C853 105 aa14.01□□□□□ -0.17
PMS1-220ENST00000618056 MUC2Q02817 5179 aa13.99□□□□□ -0.17
PMS1-220ENST00000618056 hADV29S1A0JD25 119 aa13.98□□□□□ -0.17
PMS1-220ENST00000618056 CD164Q04900 197 aa13.98□□□□□ -0.17
PMS1-220ENST00000618056 KRTAP13-3Q3SY46 172 aa13.97□□□□□ -0.17
PMS1-220ENST00000618056 ORMDL1Q9P0S3 153 aa13.97□□□□□ -0.17
PMS1-220ENST00000618056 VPS25Q9BRG1 176 aa13.96□□□□□ -0.17
PMS1-220ENST00000618056 LIMD2Q9BT23 127 aa13.96□□□□□ -0.17
PMS1-220ENST00000618056 Q6ZQY7 126 aa13.94□□□□□ -0.18
PMS1-220ENST00000618056 HRCT1Q6UXD1 115 aa13.93□□□□□ -0.18
PMS1-220ENST00000618056 MUC17Q685J3 4493 aa13.91□□□□□ -0.18
PMS1-220ENST00000618056 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.9□□□□□ -0.18
PMS1-220ENST00000618056 F8WEM9 126 aa13.86□□□□□ -0.19
PMS1-220ENST00000618056 Q5XG85 94 aa13.86□□□□□ -0.19
PMS1-220ENST00000618056 TMEM256-PLSCR3K7ERE1 68 aa13.85□□□□□ -0.19
PMS1-220ENST00000618056 H3BQ85 93 aa13.84□□□□□ -0.19
PMS1-220ENST00000618056 A0A0G2JQZ4 141 aa13.83□□□□□ -0.2
PMS1-220ENST00000618056 IGLV8-61A0A075B6I0 122 aa13.82□□□□□ -0.2
PMS1-220ENST00000618056 GHRHP01286 108 aa13.8□□□□□ -0.2
PMS1-220ENST00000618056 Q6JHZ5 121 aa13.79□□□□□ -0.2
PMS1-220ENST00000618056 OBSCN-AS1Q96MR7 158 aa13.79□□□□□ -0.2
PMS1-220ENST00000618056 FAM240AA0A1B0GVK7 77 aa13.77□□□□□ -0.21
PMS1-220ENST00000618056 JMJD7-PLA2G4BH0Y9G9 81 aa13.76□□□□□ -0.21
PMS1-220ENST00000618056 ASB16-AS1Q495Z4 193 aa13.74□□□□□ -0.21
PMS1-220ENST00000618056 C14orf132Q9NPU4 83 aa13.74□□□□□ -0.21
PMS1-220ENST00000618056 IGFL1Q6UW32 110 aa13.73□□□□□ -0.21
PMS1-220ENST00000618056 A0A0U1RQV1 116 aa13.72□□□□□ -0.21
PMS1-220ENST00000618056 XP32Q5T750 250 aa13.72□□□□□ -0.21
PMS1-220ENST00000618056 C1orf195Q5TG92 126 aa13.72□□□□□ -0.21
PMS1-220ENST00000618056 ACYP1P07311 99 aa13.71□□□□□ -0.21
PMS1-220ENST00000618056 A0A1B0GV72 72 aa13.7□□□□□ -0.22
PMS1-220ENST00000618056 SEC61BP60468 96 aaKnown RBP13.67□□□□□ -0.22
PMS1-220ENST00000618056 SIGMAR1Q99720 223 aa13.67□□□□□ -0.22
PMS1-220ENST00000618056 TRBV7-7A0A0K0K1E9 115 aa13.66□□□□□ -0.22
PMS1-220ENST00000618056 RBM3P98179 157 aaKnown RBP13.64□□□□□ -0.23
PMS1-220ENST00000618056 FAT4Q6V0I7 4981 aa13.63□□□□□ -0.23
PMS1-220ENST00000618056 NDUFV3P56181 108 aaKnown RBP13.61□□□□□ -0.23
PMS1-220ENST00000618056 CCKP06307 115 aa13.61□□□□□ -0.23
PMS1-220ENST00000618056 C9orf92A6NGG3 77 aa13.6□□□□□ -0.23
PMS1-220ENST00000618056 LOC110117498A0A087WWA1 95 aa13.59□□□□□ -0.23
PMS1-220ENST00000618056 DSCR8Q96T75 97 aa13.58□□□□□ -0.24
PMS1-220ENST00000618056 MT-ATP8P03928 68 aa13.56□□□□□ -0.24
PMS1-220ENST00000618056 PDE6GP18545 87 aa13.56□□□□□ -0.24
PMS1-220ENST00000618056 Q6Q795 121 aa13.56□□□□□ -0.24
PMS1-220ENST00000618056 Q6ZQT0 140 aa13.55□□□□□ -0.24
PMS1-220ENST00000618056 C21orf62-AS1Q17RA5 79 aa13.54□□□□□ -0.24
PMS1-220ENST00000618056 KRTAP4-1Q9BYQ7 146 aa13.52□□□□□ -0.25
PMS1-220ENST00000618056 TRBV7-4A0A0J9YYF1 115 aa13.51□□□□□ -0.25
PMS1-220ENST00000618056 LINC00643Q86TS7 51 aa13.48□□□□□ -0.25
PMS1-220ENST00000618056 SS18L2Q9UHA2 77 aa13.48□□□□□ -0.25
PMS1-220ENST00000618056 LINC00846Q9NV44 126 aa13.47□□□□□ -0.25
PMS1-220ENST00000618056 SCGB1A1P11684 91 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms