RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 C5orf47Q569G3 176 aa9.76□□□□□ -0.85
NR1H3-235ENST00000616973 LINC00476Q8WZB0 136 aa9.76□□□□□ -0.85
NR1H3-235ENST00000616973 SCXQ7RTU7 201 aa9.76□□□□□ -0.85
NR1H3-235ENST00000616973 RTL8CO15255 209 aa9.75□□□□□ -0.85
NR1H3-235ENST00000616973 DPH3Q96FX2 82 aa9.75□□□□□ -0.85
NR1H3-235ENST00000616973 UBE2AP49459 152 aa9.74□□□□□ -0.85
NR1H3-235ENST00000616973 C1orf134Q5TEV5 83 aa9.74□□□□□ -0.85
NR1H3-235ENST00000616973 KRTAP13-1Q8IUC0 172 aa9.74□□□□□ -0.85
NR1H3-235ENST00000616973 BPY2O14599 106 aa9.73□□□□□ -0.85
NR1H3-235ENST00000616973 IGFL1Q6UW32 110 aa9.73□□□□□ -0.85
NR1H3-235ENST00000616973 FBN3Q75N90 2809 aa9.72□□□□□ -0.85
NR1H3-235ENST00000616973 TGP01266 2768 aa9.71□□□□□ -0.86
NR1H3-235ENST00000616973 IGKV4-1P06312 121 aa9.7□□□□□ -0.86
NR1H3-235ENST00000616973 TMEM258P61165 79 aa9.69□□□□□ -0.86
NR1H3-235ENST00000616973 PLAC8Q9NZF1 115 aa9.68□□□□□ -0.86
NR1H3-235ENST00000616973 TRAV7A0A075B6U4 112 aa9.68□□□□□ -0.86
NR1H3-235ENST00000616973 LY6G6CO95867 125 aa9.68□□□□□ -0.86
NR1H3-235ENST00000616973 WWC2-AS2Q96NR7 200 aa9.67□□□□□ -0.86
NR1H3-235ENST00000616973 IGLV5-52A0A0A0MRZ9 124 aa9.66□□□□□ -0.86
NR1H3-235ENST00000616973 DNAH17Q9UFH2 4485 aa9.65□□□□□ -0.86
NR1H3-235ENST00000616973 Q8N9L7 120 aa9.65□□□□□ -0.86
NR1H3-235ENST00000616973 A0A0G2JQZ4 141 aa9.63□□□□□ -0.87
NR1H3-235ENST00000616973 DNAH6Q9C0G6 4158 aa9.61□□□□□ -0.87
NR1H3-235ENST00000616973 DSCR10P59022 87 aa9.6□□□□□ -0.87
NR1H3-235ENST00000616973 PSORS1C2Q9UIG4 136 aa9.6□□□□□ -0.87
NR1H3-235ENST00000616973 LINC00483Q53H64 154 aa9.6□□□□□ -0.87
NR1H3-235ENST00000616973 CYSTM1Q9H1C7 97 aa9.6□□□□□ -0.87
NR1H3-235ENST00000616973 DNAH2Q9P225 4427 aa9.59□□□□□ -0.87
NR1H3-235ENST00000616973 A0A087WSZ3 146 aa9.58□□□□□ -0.88
NR1H3-235ENST00000616973 ZNF706Q9Y5V0 76 aaPredicted RBP9.58□□□□□ -0.88
NR1H3-235ENST00000616973 KMT2AQ03164 3969 aa9.56□□□□□ -0.88
NR1H3-235ENST00000616973 C20orf197Q8N268 126 aa9.56□□□□□ -0.88
NR1H3-235ENST00000616973 ZNF861PO60384 105 aa9.55□□□□□ -0.88
NR1H3-235ENST00000616973 RPL37AP61513 92 aaKnown RBP9.55□□□□□ -0.88
NR1H3-235ENST00000616973 OCR1Q9BZK8 76 aa9.54□□□□□ -0.88
NR1H3-235ENST00000616973 K7EQZ3 153 aa9.53□□□□□ -0.88
NR1H3-235ENST00000616973 KLKP1Q107X0 134 aa9.53□□□□□ -0.88
NR1H3-235ENST00000616973 ALMS1Q8TCU4 4167 aa9.51□□□□□ -0.89
NR1H3-235ENST00000616973 HECTD4Q9Y4D8 3996 aa9.51□□□□□ -0.89
NR1H3-235ENST00000616973 KRTAP10-2P60368 255 aa9.5□□□□□ -0.89
NR1H3-235ENST00000616973 LINC00472Q9H8W2 130 aa9.49□□□□□ -0.89
NR1H3-235ENST00000616973 IGLV9-49A0A0B4J1Y8 123 aa9.48□□□□□ -0.89
NR1H3-235ENST00000616973 IGLV7-43P04211 117 aa9.48□□□□□ -0.89
NR1H3-235ENST00000616973 DEFB116Q30KQ4 102 aa9.47□□□□□ -0.89
NR1H3-235ENST00000616973 HCG22E2RYF7 251 aa9.46□□□□□ -0.89
NR1H3-235ENST00000616973 DNAH8Q96JB1 4490 aa9.45□□□□□ -0.9
NR1H3-235ENST00000616973 CIRBP-AS1Q8TBR5 109 aa9.45□□□□□ -0.9
NR1H3-235ENST00000616973 FAM30AQ9NZY2 134 aa9.45□□□□□ -0.9
NR1H3-235ENST00000616973 SRRM2Q9UQ35 2752 aaKnown RBP9.45□□□□□ -0.9
NR1H3-235ENST00000616973 H7BZZ5 65 aa9.44□□□□□ -0.9
NR1H3-235ENST00000616973 Q6ZSA8 131 aa9.44□□□□□ -0.9
NR1H3-235ENST00000616973 TMEM254Q8TBM7 123 aa9.44□□□□□ -0.9
NR1H3-235ENST00000616973 NDUFC1O43677 76 aa9.44□□□□□ -0.9
NR1H3-235ENST00000616973 SNURFQ9Y675 71 aa9.44□□□□□ -0.9
NR1H3-235ENST00000616973 Q5XG85 94 aa9.43□□□□□ -0.9
NR1H3-235ENST00000616973 LCE6AA0A183 80 aa9.43□□□□□ -0.9
NR1H3-235ENST00000616973 A8MWP4 228 aa9.43□□□□□ -0.9
NR1H3-235ENST00000616973 OXTP01178 125 aa9.43□□□□□ -0.9
NR1H3-235ENST00000616973 PRR15Q8IV56 129 aa9.42□□□□□ -0.9
NR1H3-235ENST00000616973 MOBPQ13875 183 aa9.41□□□□□ -0.9
NR1H3-235ENST00000616973 A0A0U1RQV1 116 aa9.4□□□□□ -0.9
NR1H3-235ENST00000616973 KRTAP10-1P60331 282 aa9.4□□□□□ -0.9
NR1H3-235ENST00000616973 FAM236DA0A1B0GTK5 79 aa9.39□□□□□ -0.91
NR1H3-235ENST00000616973 KRTAP29-1A8MX34 341 aaPredicted RBP9.39□□□□□ -0.91
NR1H3-235ENST00000616973 FAM236CP0DP71 79 aa9.39□□□□□ -0.91
NR1H3-235ENST00000616973 Q96NJ1 140 aa9.39□□□□□ -0.91
NR1H3-235ENST00000616973 ANAPC11Q9NYG5 84 aa9.39□□□□□ -0.91
NR1H3-235ENST00000616973 SERP1Q9Y6X1 66 aa9.39□□□□□ -0.91
NR1H3-235ENST00000616973 FRAS1Q86XX4 4008 aa9.38□□□□□ -0.91
NR1H3-235ENST00000616973 C4orf26Q17RF5 130 aa9.38□□□□□ -0.91
NR1H3-235ENST00000616973 DNAH11Q96DT5 4516 aa9.37□□□□□ -0.91
NR1H3-235ENST00000616973 WFDC13Q8IUB5 93 aa9.36□□□□□ -0.91
NR1H3-235ENST00000616973 HRCT1Q6UXD1 115 aa9.35□□□□□ -0.91
NR1H3-235ENST00000616973 NDUFB1O75438 58 aa9.34□□□□□ -0.91
NR1H3-235ENST00000616973 CASC2Q6XLA1 102 aa9.34□□□□□ -0.91
NR1H3-235ENST00000616973 DNAH5Q8TE73 4624 aa9.34□□□□□ -0.91
NR1H3-235ENST00000616973 CD164Q04900 197 aa9.32□□□□□ -0.92
NR1H3-235ENST00000616973 SSBP3-AS1Q7Z2R9 100 aa9.32□□□□□ -0.92
NR1H3-235ENST00000616973 HYDINQ4G0P3 5121 aa9.31□□□□□ -0.92
NR1H3-235ENST00000616973 ATP5EP56381 51 aaPredicted RBP9.31□□□□□ -0.92
NR1H3-235ENST00000616973 PKD1P98161 4303 aa9.3□□□□□ -0.92
NR1H3-235ENST00000616973 MMP24-AS1A0A0U1RRL7 71 aa9.3□□□□□ -0.92
NR1H3-235ENST00000616973 PRO0628Q9UI54 55 aa9.3□□□□□ -0.92
NR1H3-235ENST00000616973 ZCCHC13Q8WW36 166 aaKnown RBP9.29□□□□□ -0.92
NR1H3-235ENST00000616973 FAT2Q9NYQ8 4349 aa9.29□□□□□ -0.92
NR1H3-235ENST00000616973 SMIM26A0A096LP01 95 aa9.27□□□□□ -0.93
NR1H3-235ENST00000616973 ASB16-AS1Q495Z4 193 aa9.27□□□□□ -0.93
NR1H3-235ENST00000616973 FAM229BQ4G0N7 80 aa9.26□□□□□ -0.93
NR1H3-235ENST00000616973 A0A1B0GVX0 72 aa9.24□□□□□ -0.93
NR1H3-235ENST00000616973 hDV103S1A0JD37 113 aa9.24□□□□□ -0.93
NR1H3-235ENST00000616973 LINC00336Q6ZUF6 198 aa9.24□□□□□ -0.93
NR1H3-235ENST00000616973 C8orf17Q9NRJ1 99 aa9.23□□□□□ -0.93
NR1H3-235ENST00000616973 CDK2AP2O75956 126 aa9.23□□□□□ -0.93
NR1H3-235ENST00000616973 MP68P56378 58 aa9.23□□□□□ -0.93
NR1H3-235ENST00000616973 SACSQ9NZJ4 4579 aa9.22□□□□□ -0.93
NR1H3-235ENST00000616973 H3BPC8 53 aa9.21□□□□□ -0.93
NR1H3-235ENST00000616973 A0A087X002 238 aa9.2□□□□□ -0.94
NR1H3-235ENST00000616973 KRTAP13-2Q52LG2 175 aa9.19□□□□□ -0.94
NR1H3-235ENST00000616973 IGHV6-1A0A0B4J1U7 121 aa9.18□□□□□ -0.94
NR1H3-235ENST00000616973 KRTAP1-4P0C5Y4 121 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms