RNA–Protein interactions for RNA: ENST00000616552.4

MCM3-207, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-207ENST00000616552 PMAIP1Q13794 54 aa6.03□□□□□ -1.44
MCM3-207ENST00000616552 TNP2Q05952 138 aa6.03□□□□□ -1.44
MCM3-207ENST00000616552 LINC00476Q8WZB0 136 aa6.03□□□□□ -1.44
MCM3-207ENST00000616552 HCG22E2RYF7 251 aa6.02□□□□□ -1.45
MCM3-207ENST00000616552 KRTAP4-16G5E9R7 235 aaPredicted RBP6.01□□□□□ -1.45
MCM3-207ENST00000616552 SPTSSBQ8NFR3 76 aa6.01□□□□□ -1.45
MCM3-207ENST00000616552 TGP01266 2768 aa6.01□□□□□ -1.45
MCM3-207ENST00000616552 IGLV1-50A0A075B6I6 118 aa6.01□□□□□ -1.45
MCM3-207ENST00000616552 PLA2G2DQ9UNK4 145 aa6□□□□□ -1.45
MCM3-207ENST00000616552 IGFL1Q6UW32 110 aa6□□□□□ -1.45
MCM3-207ENST00000616552 Q5VV11 94 aa5.99□□□□□ -1.45
MCM3-207ENST00000616552 SPRR4Q96PI1 79 aa5.99□□□□□ -1.45
MCM3-207ENST00000616552 CHKB-CPT1BH3BT56 60 aa5.98□□□□□ -1.45
MCM3-207ENST00000616552 H3BNG1 76 aa5.97□□□□□ -1.45
MCM3-207ENST00000616552 IGLV5-37A0A075B6J1 123 aa5.97□□□□□ -1.45
MCM3-207ENST00000616552 PRR15LQ9BU68 103 aa5.97□□□□□ -1.45
MCM3-207ENST00000616552 DHRS4-AS1Q9P1J3 65 aa5.97□□□□□ -1.45
MCM3-207ENST00000616552 MRPL55Q7Z7F7 128 aaKnown RBP5.96□□□□□ -1.46
MCM3-207ENST00000616552 B9D2Q9BPU9 175 aa5.96□□□□□ -1.46
MCM3-207ENST00000616552 PCOTHQ58A44 107 aa5.95□□□□□ -1.46
MCM3-207ENST00000616552 DEFB131BA0A096LNP1 70 aa5.95□□□□□ -1.46
MCM3-207ENST00000616552 NDUFB1O75438 58 aa5.95□□□□□ -1.46
MCM3-207ENST00000616552 KRTAP11-1Q8IUC1 163 aa5.95□□□□□ -1.46
MCM3-207ENST00000616552 C16orf90A8MZG2 172 aa5.95□□□□□ -1.46
MCM3-207ENST00000616552 KRTAP10-11P60412 298 aa5.95□□□□□ -1.46
MCM3-207ENST00000616552 DNAH9Q9NYC9 4486 aa5.94□□□□□ -1.46
MCM3-207ENST00000616552 TLX1NBP0CAT3 122 aa5.94□□□□□ -1.46
MCM3-207ENST00000616552 DNAH1Q9P2D7 4330 aa5.94□□□□□ -1.46
MCM3-207ENST00000616552 H0Y9P7 68 aa5.94□□□□□ -1.46
MCM3-207ENST00000616552 H3BPC8 53 aa5.93□□□□□ -1.46
MCM3-207ENST00000616552 SPRR1AP35321 89 aa5.93□□□□□ -1.46
MCM3-207ENST00000616552 CHTF8P0CG12 524 aa5.93□□□□□ -1.46
MCM3-207ENST00000616552 SPANXA2-OT1Q8N9U9 137 aa5.93□□□□□ -1.46
MCM3-207ENST00000616552 MP68P56378 58 aa5.93□□□□□ -1.46
MCM3-207ENST00000616552 Q8N9P0 234 aaPredicted RBP5.93□□□□□ -1.46
MCM3-207ENST00000616552 REG3GQ6UW15 175 aa5.92□□□□□ -1.46
MCM3-207ENST00000616552 LCA10Q71F78 164 aa5.92□□□□□ -1.46
MCM3-207ENST00000616552 KRTAP24-1Q3LI83 254 aa5.92□□□□□ -1.46
MCM3-207ENST00000616552 LINC01556Q5JQF7 62 aa5.91□□□□□ -1.46
MCM3-207ENST00000616552 CNBPP62633 177 aaKnown RBP5.91□□□□□ -1.46
MCM3-207ENST00000616552 CASC2Q6XLA1 102 aa5.91□□□□□ -1.46
MCM3-207ENST00000616552 DNAH7Q8WXX0 4024 aa5.9□□□□□ -1.46
MCM3-207ENST00000616552 LINC00588Q9Y4M8 146 aa5.9□□□□□ -1.46
MCM3-207ENST00000616552 H0Y9J4 135 aa5.9□□□□□ -1.47
MCM3-207ENST00000616552 SPAG11AQ6PDA7 123 aa5.89□□□□□ -1.47
MCM3-207ENST00000616552 KRTAP29-1A8MX34 341 aaPredicted RBP5.89□□□□□ -1.47
MCM3-207ENST00000616552 C11orf45Q8TAV5 145 aa5.89□□□□□ -1.47
MCM3-207ENST00000616552 IGLV8-61A0A075B6I0 122 aa5.89□□□□□ -1.47
MCM3-207ENST00000616552 A6NED7 52 aa5.89□□□□□ -1.47
MCM3-207ENST00000616552 FBN3Q75N90 2809 aa5.88□□□□□ -1.47
MCM3-207ENST00000616552 MDFIQ99750 246 aa5.88□□□□□ -1.47
MCM3-207ENST00000616552 DNHD1Q96M86 4753 aa5.88□□□□□ -1.47
MCM3-207ENST00000616552 UBE2AP49459 152 aa5.88□□□□□ -1.47
MCM3-207ENST00000616552 PHF5AQ7RTV0 110 aaKnown RBP5.88□□□□□ -1.47
MCM3-207ENST00000616552 FRAS1Q86XX4 4008 aa5.88□□□□□ -1.47
MCM3-207ENST00000616552 COA5Q86WW8 74 aa5.86□□□□□ -1.47
MCM3-207ENST00000616552 CMYA5Q8N3K9 4069 aa5.86□□□□□ -1.47
MCM3-207ENST00000616552 ANAPC11Q9NYG5 84 aa5.85□□□□□ -1.47
MCM3-207ENST00000616552 LIMD2Q9BT23 127 aa5.84□□□□□ -1.47
MCM3-207ENST00000616552 KRTAP1-5Q9BYS1 174 aa5.84□□□□□ -1.47
MCM3-207ENST00000616552 DNAH10OSP0CZ25 163 aa5.84□□□□□ -1.47
MCM3-207ENST00000616552 RBM12B-AS1Q9P1G2 102 aa5.84□□□□□ -1.48
MCM3-207ENST00000616552 K7EIL1 84 aa5.83□□□□□ -1.48
MCM3-207ENST00000616552 CD164Q04900 197 aa5.83□□□□□ -1.48
MCM3-207ENST00000616552 C9orf163Q8N9P6 203 aa5.83□□□□□ -1.48
MCM3-207ENST00000616552 IGLV9-49A0A0B4J1Y8 123 aa5.82□□□□□ -1.48
MCM3-207ENST00000616552 NDUFS5O43920 106 aa5.82□□□□□ -1.48
MCM3-207ENST00000616552 SPINK7P58062 85 aa5.82□□□□□ -1.48
MCM3-207ENST00000616552 LINC00472Q9H8W2 130 aa5.82□□□□□ -1.48
MCM3-207ENST00000616552 LOC101927531A0A1B0GV80 90 aa5.81□□□□□ -1.48
MCM3-207ENST00000616552 HUWE1Q7Z6Z7 4374 aaKnown RBP5.81□□□□□ -1.48
MCM3-207ENST00000616552 RETNLBQ9BQ08 111 aa5.81□□□□□ -1.48
MCM3-207ENST00000616552 A0A087X002 238 aa5.8□□□□□ -1.48
MCM3-207ENST00000616552 PANO1I0J062 215 aa5.8□□□□□ -1.48
MCM3-207ENST00000616552 NOTCH2NLQ7Z3S9 236 aa5.8□□□□□ -1.48
MCM3-207ENST00000616552 A8MWP4 228 aa5.8□□□□□ -1.48
MCM3-207ENST00000616552 MMP24-AS1A0A0U1RRL7 71 aa5.8□□□□□ -1.48
MCM3-207ENST00000616552 Q75L30 129 aa5.79□□□□□ -1.48
MCM3-207ENST00000616552 KTN1-AS1Q86SY8 53 aa5.78□□□□□ -1.48
MCM3-207ENST00000616552 SPINK6Q6UWN8 80 aa5.78□□□□□ -1.48
MCM3-207ENST00000616552 IGHV6-1A0A0B4J1U7 121 aa5.78□□□□□ -1.48
MCM3-207ENST00000616552 PRR26Q8N8Z3 221 aa5.77□□□□□ -1.49
MCM3-207ENST00000616552 MOBPQ13875 183 aa5.77□□□□□ -1.49
MCM3-207ENST00000616552 DMBT1Q9UGM3 2413 aaPredicted RBP5.77□□□□□ -1.49
MCM3-207ENST00000616552 ATP11AUNQ6ZP68 121 aa5.76□□□□□ -1.49
MCM3-207ENST00000616552 PRAC1Q96KF2 57 aa5.76□□□□□ -1.49
MCM3-207ENST00000616552 A6NN06 94 aa5.76□□□□□ -1.49
MCM3-207ENST00000616552 SPRR1BP22528 89 aa5.76□□□□□ -1.49
MCM3-207ENST00000616552 ADM2Q7Z4H4 148 aa5.76□□□□□ -1.49
MCM3-207ENST00000616552 PLAC8Q9NZF1 115 aa5.76□□□□□ -1.49
MCM3-207ENST00000616552 UBE2DNLQ8IWF7 75 aa5.75□□□□□ -1.49
MCM3-207ENST00000616552 KRTAP21-3Q3LHN1 58 aa5.75□□□□□ -1.49
MCM3-207ENST00000616552 IGLV7-46A0A075B6I9 117 aa5.74□□□□□ -1.49
MCM3-207ENST00000616552 HRES1P13985 223 aa5.74□□□□□ -1.49
MCM3-207ENST00000616552 ASB16-AS1Q495Z4 193 aa5.74□□□□□ -1.49
MCM3-207ENST00000616552 FLG2Q5D862 2391 aaPredicted RBP5.73□□□□□ -1.49
MCM3-207ENST00000616552 Q96NJ1 140 aa5.72□□□□□ -1.49
MCM3-207ENST00000616552 CDC42SE1Q9NRR8 79 aa5.7□□□□□ -1.5
MCM3-207ENST00000616552 LINC01558Q9Y6Z2 57 aa5.7□□□□□ -1.5
MCM3-207ENST00000616552 DNAH8Q96JB1 4490 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms