RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 LINC00575Q6W349 94 aa10.92□□□□□ -0.66
TRAPPC3-208ENST00000616074 VAMP3Q15836 100 aa10.91□□□□□ -0.66
TRAPPC3-208ENST00000616074 Q6ZQY7 126 aa10.91□□□□□ -0.66
TRAPPC3-208ENST00000616074 TRBV7-7A0A0K0K1E9 115 aa10.89□□□□□ -0.67
TRAPPC3-208ENST00000616074 IGFL1Q6UW32 110 aa10.89□□□□□ -0.67
TRAPPC3-208ENST00000616074 CLEC2BQ92478 149 aa10.89□□□□□ -0.67
TRAPPC3-208ENST00000616074 hADV29S1A0JD25 119 aa10.88□□□□□ -0.67
TRAPPC3-208ENST00000616074 Q6JHZ5 121 aa10.88□□□□□ -0.67
TRAPPC3-208ENST00000616074 SNRPEP62304 92 aaKnown RBP10.86□□□□□ -0.67
TRAPPC3-208ENST00000616074 OBSCN-AS1Q96MR7 158 aa10.84□□□□□ -0.67
TRAPPC3-208ENST00000616074 OCIAD2Q56VL3 154 aa10.83□□□□□ -0.68
TRAPPC3-208ENST00000616074 Q75L30 129 aa10.82□□□□□ -0.68
TRAPPC3-208ENST00000616074 ATP11AUNQ6ZP68 121 aa10.81□□□□□ -0.68
TRAPPC3-208ENST00000616074 Q6Q795 121 aa10.79□□□□□ -0.68
TRAPPC3-208ENST00000616074 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC3-208ENST00000616074 C12orf57Q99622 126 aa10.76□□□□□ -0.69
TRAPPC3-208ENST00000616074 HSBP1L1C9JCN9 74 aa10.75□□□□□ -0.69
TRAPPC3-208ENST00000616074 H3BUT2 72 aa10.75□□□□□ -0.69
TRAPPC3-208ENST00000616074 LST1O00453 97 aa10.75□□□□□ -0.69
TRAPPC3-208ENST00000616074 PPDPFLQ8WWR9 84 aa10.75□□□□□ -0.69
TRAPPC3-208ENST00000616074 BVES-AS1Q5T3Y7 98 aa10.74□□□□□ -0.69
TRAPPC3-208ENST00000616074 HIST3H2BBQ8N257 126 aa10.74□□□□□ -0.69
TRAPPC3-208ENST00000616074 HIST1H2BLQ99880 126 aa10.74□□□□□ -0.69
TRAPPC3-208ENST00000616074 SNHG12Q9BXW3 62 aa10.74□□□□□ -0.69
TRAPPC3-208ENST00000616074 Q96NJ1 140 aa10.72□□□□□ -0.69
TRAPPC3-208ENST00000616074 SCGB1D1O95968 90 aa10.69□□□□□ -0.7
TRAPPC3-208ENST00000616074 S100A2P29034 98 aa10.69□□□□□ -0.7
TRAPPC3-208ENST00000616074 HIST1H4GQ99525 98 aa10.68□□□□□ -0.7
TRAPPC3-208ENST00000616074 C20orf166-AS1Q96NR2 134 aa10.66□□□□□ -0.7
TRAPPC3-208ENST00000616074 SS18L2Q9UHA2 77 aa10.66□□□□□ -0.7
TRAPPC3-208ENST00000616074 A8MUU9 505 aa10.63□□□□□ -0.71
TRAPPC3-208ENST00000616074 USH2AO75445 5202 aa10.62□□□□□ -0.71
TRAPPC3-208ENST00000616074 SSPOA2VEC9 5147 aa10.61□□□□□ -0.71
TRAPPC3-208ENST00000616074 TEN1Q86WV5 123 aa10.61□□□□□ -0.71
TRAPPC3-208ENST00000616074 COX8AP10176 69 aa10.6□□□□□ -0.71
TRAPPC3-208ENST00000616074 KRTAP9-8Q9BYQ0 159 aa10.6□□□□□ -0.71
TRAPPC3-208ENST00000616074 A0A087WSZ3 146 aa10.59□□□□□ -0.71
TRAPPC3-208ENST00000616074 CFC1P0CG37 223 aa10.59□□□□□ -0.71
TRAPPC3-208ENST00000616074 NDUFV3P56181 108 aaKnown RBP10.59□□□□□ -0.71
TRAPPC3-208ENST00000616074 FAM218AQ96MZ4 157 aa10.59□□□□□ -0.71
TRAPPC3-208ENST00000616074 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
TRAPPC3-208ENST00000616074 KRTAP3-2Q9BYR7 98 aa10.59□□□□□ -0.71
TRAPPC3-208ENST00000616074 RAB37Q96AX2 223 aa10.56□□□□□ -0.72
TRAPPC3-208ENST00000616074 TRBV20-1A0A075B6N2 111 aa10.55□□□□□ -0.72
TRAPPC3-208ENST00000616074 H0YGX0 51 aa10.55□□□□□ -0.72
TRAPPC3-208ENST00000616074 SNCGO76070 127 aa10.55□□□□□ -0.72
TRAPPC3-208ENST00000616074 DSCR10P59022 87 aa10.55□□□□□ -0.72
TRAPPC3-208ENST00000616074 DLEU1O43261 78 aa10.54□□□□□ -0.72
TRAPPC3-208ENST00000616074 S100A6P06703 90 aa10.54□□□□□ -0.72
TRAPPC3-208ENST00000616074 A0A0B4J2C4 111 aa10.52□□□□□ -0.73
TRAPPC3-208ENST00000616074 H3BMG7 143 aa10.52□□□□□ -0.73
TRAPPC3-208ENST00000616074 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC3-208ENST00000616074 C14orf144Q96I85 54 aa10.49□□□□□ -0.73
TRAPPC3-208ENST00000616074 SIGMAR1Q99720 223 aa10.49□□□□□ -0.73
TRAPPC3-208ENST00000616074 A0A1W2PNM2 257 aa10.48□□□□□ -0.73
TRAPPC3-208ENST00000616074 FABP2P12104 132 aa10.48□□□□□ -0.73
TRAPPC3-208ENST00000616074 KRTAP16-1A8MUX0 517 aa10.47□□□□□ -0.73
TRAPPC3-208ENST00000616074 HIGD1BQ9P298 99 aa10.47□□□□□ -0.73
TRAPPC3-208ENST00000616074 A0A1B0GX51 115 aa10.45□□□□□ -0.74
TRAPPC3-208ENST00000616074 KRTAP9-7A8MTY7 169 aa10.44□□□□□ -0.74
TRAPPC3-208ENST00000616074 GHRHP01286 108 aa10.44□□□□□ -0.74
TRAPPC3-208ENST00000616074 C2orf91Q6ZV80 131 aa10.44□□□□□ -0.74
TRAPPC3-208ENST00000616074 LINC00313P59037 77 aa10.43□□□□□ -0.74
TRAPPC3-208ENST00000616074 PAM16Q9Y3D7 125 aa10.43□□□□□ -0.74
TRAPPC3-208ENST00000616074 MT2AP02795 61 aa10.42□□□□□ -0.74
TRAPPC3-208ENST00000616074 SPATA45Q537H7 98 aa10.42□□□□□ -0.74
TRAPPC3-208ENST00000616074 FAM236DA0A1B0GTK5 79 aa10.41□□□□□ -0.74
TRAPPC3-208ENST00000616074 FAM236CP0DP71 79 aa10.41□□□□□ -0.74
TRAPPC3-208ENST00000616074 IGKV4-1P06312 121 aa10.4□□□□□ -0.74
TRAPPC3-208ENST00000616074 CEND1Q8N111 149 aa10.4□□□□□ -0.74
TRAPPC3-208ENST00000616074 PRO1854Q9UHT4 67 aa10.4□□□□□ -0.74
TRAPPC3-208ENST00000616074 TRIAP1O43715 76 aa10.38□□□□□ -0.75
TRAPPC3-208ENST00000616074 NOTCH2NLQ7Z3S9 236 aa10.38□□□□□ -0.75
TRAPPC3-208ENST00000616074 TRBV7-4A0A0J9YYF1 115 aa10.37□□□□□ -0.75
TRAPPC3-208ENST00000616074 A0A1B0GV72 72 aa10.37□□□□□ -0.75
TRAPPC3-208ENST00000616074 HRES1P13985 223 aa10.37□□□□□ -0.75
TRAPPC3-208ENST00000616074 ANKRD29Q8N6D5 301 aa10.37□□□□□ -0.75
TRAPPC3-208ENST00000616074 MPLKIPQ8TAP9 179 aa10.37□□□□□ -0.75
TRAPPC3-208ENST00000616074 FCGBPQ9Y6R7 5405 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC3-208ENST00000616074 TMEM238LA0A1B0GVL6 79 aa10.35□□□□□ -0.75
TRAPPC3-208ENST00000616074 A6NJY4 79 aa10.35□□□□□ -0.75
TRAPPC3-208ENST00000616074 MT1FP04733 61 aa10.35□□□□□ -0.75
TRAPPC3-208ENST00000616074 FXYD2P54710 66 aa10.35□□□□□ -0.75
TRAPPC3-208ENST00000616074 DEFB116Q30KQ4 102 aa10.34□□□□□ -0.75
TRAPPC3-208ENST00000616074 VAMP8Q9BV40 100 aa10.34□□□□□ -0.75
TRAPPC3-208ENST00000616074 RBM12B-AS1Q9P1G2 102 aa10.34□□□□□ -0.75
TRAPPC3-208ENST00000616074 S100A1P23297 94 aa10.33□□□□□ -0.76
TRAPPC3-208ENST00000616074 LINC00472Q9H8W2 130 aa10.32□□□□□ -0.76
TRAPPC3-208ENST00000616074 ORMDL1Q9P0S3 153 aa10.32□□□□□ -0.76
TRAPPC3-208ENST00000616074 LCE2BO14633 110 aa10.31□□□□□ -0.76
TRAPPC3-208ENST00000616074 DNAL4O96015 105 aa10.31□□□□□ -0.76
TRAPPC3-208ENST00000616074 IGHV6-1A0A0B4J1U7 121 aa10.29□□□□□ -0.76
TRAPPC3-208ENST00000616074 CCKP06307 115 aa10.28□□□□□ -0.76
TRAPPC3-208ENST00000616074 KRTAP9-3Q9BYQ3 159 aa10.27□□□□□ -0.77
TRAPPC3-208ENST00000616074 H3BQ85 93 aa10.26□□□□□ -0.77
TRAPPC3-208ENST00000616074 TRACP01848 142 aa10.26□□□□□ -0.77
TRAPPC3-208ENST00000616074 KRTAP10-10P60014 251 aa10.26□□□□□ -0.77
TRAPPC3-208ENST00000616074 KRTAP19-1Q8IUB9 90 aa10.26□□□□□ -0.77
TRAPPC3-208ENST00000616074 TMEM256-PLSCR3K7ERE1 68 aa10.25□□□□□ -0.77
TRAPPC3-208ENST00000616074 PSMB2P49721 201 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms