RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.52□□□□□ -0.73
CNOT3-208ENST00000613073 STARD9Q9P2P6 4700 aa10.51□□□□□ -0.73
CNOT3-208ENST00000613073 A0A1W2PNM2 257 aa10.51□□□□□ -0.73
CNOT3-208ENST00000613073 K7EQZ3 153 aa10.51□□□□□ -0.73
CNOT3-208ENST00000613073 KRTAP7-1Q8IUC3 87 aa10.51□□□□□ -0.73
CNOT3-208ENST00000613073 DEFB116Q30KQ4 102 aa10.5□□□□□ -0.73
CNOT3-208ENST00000613073 KCNQ1DNQ9H478 68 aa10.49□□□□□ -0.73
CNOT3-208ENST00000613073 ETDCA0A1B0GVM5 59 aa10.49□□□□□ -0.73
CNOT3-208ENST00000613073 ZCCHC13Q8WW36 166 aaKnown RBP10.48□□□□□ -0.73
CNOT3-208ENST00000613073 IGKV2-24A0A0C4DH68 120 aa10.47□□□□□ -0.73
CNOT3-208ENST00000613073 DSCR10P59022 87 aa10.47□□□□□ -0.73
CNOT3-208ENST00000613073 PLA2G2DQ9UNK4 145 aa10.47□□□□□ -0.73
CNOT3-208ENST00000613073 CD164Q04900 197 aa10.46□□□□□ -0.73
CNOT3-208ENST00000613073 C1orf137Q5JT78 98 aa10.46□□□□□ -0.74
CNOT3-208ENST00000613073 IGLV1-50A0A075B6I6 118 aa10.45□□□□□ -0.74
CNOT3-208ENST00000613073 A0A0G2JQZ4 141 aa10.45□□□□□ -0.74
CNOT3-208ENST00000613073 LCE6AA0A183 80 aa10.45□□□□□ -0.74
CNOT3-208ENST00000613073 A0A1W2PNN7 141 aa10.45□□□□□ -0.74
CNOT3-208ENST00000613073 MRPL55Q7Z7F7 128 aaKnown RBP10.44□□□□□ -0.74
CNOT3-208ENST00000613073 NUPR2A6NF83 97 aa10.44□□□□□ -0.74
CNOT3-208ENST00000613073 IGLV5-48A0A075B6I7 105 aa10.43□□□□□ -0.74
CNOT3-208ENST00000613073 A0A096LNI7 61 aa10.43□□□□□ -0.74
CNOT3-208ENST00000613073 WFDC13Q8IUB5 93 aa10.43□□□□□ -0.74
CNOT3-208ENST00000613073 IGLV5-37A0A075B6J1 123 aa10.43□□□□□ -0.74
CNOT3-208ENST00000613073 NBDYA0A0U1RRE5 68 aa10.41□□□□□ -0.74
CNOT3-208ENST00000613073 Q9BRP9 147 aa10.4□□□□□ -0.74
CNOT3-208ENST00000613073 CNBPP62633 177 aaKnown RBP10.4□□□□□ -0.74
CNOT3-208ENST00000613073 Q6ZRX8 168 aa10.4□□□□□ -0.74
CNOT3-208ENST00000613073 Q8NBF4 154 aa10.4□□□□□ -0.74
CNOT3-208ENST00000613073 SPTSSBQ8NFR3 76 aa10.4□□□□□ -0.74
CNOT3-208ENST00000613073 KRTAP4-16G5E9R7 235 aaPredicted RBP10.39□□□□□ -0.75
CNOT3-208ENST00000613073 CHKB-CPT1BH3BT56 60 aa10.39□□□□□ -0.75
CNOT3-208ENST00000613073 Q5VV11 94 aa10.39□□□□□ -0.75
CNOT3-208ENST00000613073 HCG22E2RYF7 251 aa10.38□□□□□ -0.75
CNOT3-208ENST00000613073 C16orf90A8MZG2 172 aa10.38□□□□□ -0.75
CNOT3-208ENST00000613073 CHTF8P0CG12 524 aa10.38□□□□□ -0.75
CNOT3-208ENST00000613073 LINC00208Q96KT6 92 aa10.37□□□□□ -0.75
CNOT3-208ENST00000613073 CYP4F30PQ9H0H9 118 aa10.37□□□□□ -0.75
CNOT3-208ENST00000613073 VPS13DQ5THJ4 4388 aa10.37□□□□□ -0.75
CNOT3-208ENST00000613073 SPRR1AP35321 89 aa10.37□□□□□ -0.75
CNOT3-208ENST00000613073 KMT2AQ03164 3969 aa10.36□□□□□ -0.75
CNOT3-208ENST00000613073 TGP01266 2768 aa10.35□□□□□ -0.75
CNOT3-208ENST00000613073 UBE2BP63146 152 aa10.35□□□□□ -0.75
CNOT3-208ENST00000613073 C14orf177Q52M58 125 aa10.35□□□□□ -0.75
CNOT3-208ENST00000613073 DHRS4-AS1Q9P1J3 65 aa10.35□□□□□ -0.75
CNOT3-208ENST00000613073 REG3GQ6UW15 175 aa10.34□□□□□ -0.75
CNOT3-208ENST00000613073 PRR15LQ9BU68 103 aa10.34□□□□□ -0.75
CNOT3-208ENST00000613073 TNP2Q05952 138 aa10.32□□□□□ -0.76
CNOT3-208ENST00000613073 SRRM2Q9UQ35 2752 aaKnown RBP10.32□□□□□ -0.76
CNOT3-208ENST00000613073 MP68P56378 58 aa10.32□□□□□ -0.76
CNOT3-208ENST00000613073 Q6ZRN7 208 aaPredicted RBP10.32□□□□□ -0.76
CNOT3-208ENST00000613073 RPL37AP61513 92 aaKnown RBP10.31□□□□□ -0.76
CNOT3-208ENST00000613073 PHF5AQ7RTV0 110 aaKnown RBP10.3□□□□□ -0.76
CNOT3-208ENST00000613073 NDUFB1O75438 58 aa10.29□□□□□ -0.76
CNOT3-208ENST00000613073 PRLHP81277 87 aa10.29□□□□□ -0.76
CNOT3-208ENST00000613073 SPRR4Q96PI1 79 aa10.29□□□□□ -0.76
CNOT3-208ENST00000613073 C9orf163Q8N9P6 203 aa10.29□□□□□ -0.76
CNOT3-208ENST00000613073 Q8N9P0 234 aaPredicted RBP10.28□□□□□ -0.76
CNOT3-208ENST00000613073 FBN3Q75N90 2809 aa10.28□□□□□ -0.76
CNOT3-208ENST00000613073 DNAH2Q9P225 4427 aa10.28□□□□□ -0.76
CNOT3-208ENST00000613073 KRTAP11-1Q8IUC1 163 aa10.27□□□□□ -0.76
CNOT3-208ENST00000613073 UBE2AP49459 152 aa10.27□□□□□ -0.77
CNOT3-208ENST00000613073 RBM12B-AS1Q9P1G2 102 aa10.26□□□□□ -0.77
CNOT3-208ENST00000613073 PANO1I0J062 215 aa10.26□□□□□ -0.77
CNOT3-208ENST00000613073 LINC00476Q8WZB0 136 aa10.26□□□□□ -0.77
CNOT3-208ENST00000613073 A0A087WSZ3 146 aa10.25□□□□□ -0.77
CNOT3-208ENST00000613073 A0A1B0GW54 56 aa10.25□□□□□ -0.77
CNOT3-208ENST00000613073 HECTD4Q9Y4D8 3996 aa10.24□□□□□ -0.77
CNOT3-208ENST00000613073 A6NED7 52 aa10.24□□□□□ -0.77
CNOT3-208ENST00000613073 C4orf48Q5BLP8 95 aa10.24□□□□□ -0.77
CNOT3-208ENST00000613073 H0Y9P7 68 aa10.24□□□□□ -0.77
CNOT3-208ENST00000613073 LCA10Q71F78 164 aa10.23□□□□□ -0.77
CNOT3-208ENST00000613073 KTN1-AS1Q86SY8 53 aa10.23□□□□□ -0.77
CNOT3-208ENST00000613073 IGFL1Q6UW32 110 aa10.2□□□□□ -0.78
CNOT3-208ENST00000613073 LIMD2Q9BT23 127 aa10.2□□□□□ -0.78
CNOT3-208ENST00000613073 A0A087WTM6 91 aa10.2□□□□□ -0.78
CNOT3-208ENST00000613073 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.18□□□□□ -0.78
CNOT3-208ENST00000613073 CASC2Q6XLA1 102 aa10.16□□□□□ -0.78
CNOT3-208ENST00000613073 LY6G6CO95867 125 aa10.15□□□□□ -0.78
CNOT3-208ENST00000613073 Q6ZR54 194 aa10.15□□□□□ -0.78
CNOT3-208ENST00000613073 COA5Q86WW8 74 aa10.14□□□□□ -0.79
CNOT3-208ENST00000613073 KRTAP29-1A8MX34 341 aaPredicted RBP10.12□□□□□ -0.79
CNOT3-208ENST00000613073 RTL8CO15255 209 aa10.12□□□□□ -0.79
CNOT3-208ENST00000613073 PCOTHQ58A44 107 aa10.12□□□□□ -0.79
CNOT3-208ENST00000613073 SPANXA2-OT1Q8N9U9 137 aa10.12□□□□□ -0.79
CNOT3-208ENST00000613073 SPACA4Q8TDM5 124 aa10.12□□□□□ -0.79
CNOT3-208ENST00000613073 ATP11AUNQ6ZP68 121 aa10.11□□□□□ -0.79
CNOT3-208ENST00000613073 DNAH17Q9UFH2 4485 aa10.11□□□□□ -0.79
CNOT3-208ENST00000613073 SPAG11AQ6PDA7 123 aa10.1□□□□□ -0.79
CNOT3-208ENST00000613073 Q75L30 129 aa10.09□□□□□ -0.79
CNOT3-208ENST00000613073 C1orf134Q5TEV5 83 aa10.09□□□□□ -0.79
CNOT3-208ENST00000613073 FRAS1Q86XX4 4008 aa10.09□□□□□ -0.79
CNOT3-208ENST00000613073 A6NN06 94 aa10.09□□□□□ -0.79
CNOT3-208ENST00000613073 H0Y9J4 135 aa10.06□□□□□ -0.8
CNOT3-208ENST00000613073 DNAH8Q96JB1 4490 aa10.05□□□□□ -0.8
CNOT3-208ENST00000613073 DNAH6Q9C0G6 4158 aa10.05□□□□□ -0.8
CNOT3-208ENST00000613073 IGLV5-52A0A0A0MRZ9 124 aa10.04□□□□□ -0.8
CNOT3-208ENST00000613073 LOC101927531A0A1B0GV80 90 aa10.04□□□□□ -0.8
CNOT3-208ENST00000613073 NDUFS5O43920 106 aa10.03□□□□□ -0.8
CNOT3-208ENST00000613073 CDC42SE1Q9NRR8 79 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms