RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 ZFYVE26Q68DK2 2539 aa7.46□□□□□ -1.22
HLCS-207ENST00000612277 BRCA2P51587 3418 aa7.45□□□□□ -1.22
HLCS-207ENST00000612277 SETD2Q9BYW2 2564 aaPredicted RBP7.43□□□□□ -1.22
HLCS-207ENST00000612277 PKD1L2Q7Z442 2459 aa7.41□□□□□ -1.22
HLCS-207ENST00000612277 ANKRD11Q6UB99 2663 aaPredicted RBP7.41□□□□□ -1.22
HLCS-207ENST00000612277 USP9YO00507 2555 aaPredicted RBP7.4□□□□□ -1.22
HLCS-207ENST00000612277 PANO1I0J062 215 aa7.39□□□□□ -1.23
HLCS-207ENST00000612277 CEP295Q9C0D2 2601 aa7.38□□□□□ -1.23
HLCS-207ENST00000612277 RANBP2P49792 3224 aaKnown RBP7.38□□□□□ -1.23
HLCS-207ENST00000612277 XIRP2A4UGR9 3374 aa7.36□□□□□ -1.23
HLCS-207ENST00000612277 F8P00451 2351 aa7.36□□□□□ -1.23
HLCS-207ENST00000612277 A8MU10 97 aa7.34□□□□□ -1.23
HLCS-207ENST00000612277 MKI67P46013 3256 aaKnown RBP7.34□□□□□ -1.24
HLCS-207ENST00000612277 KRTAP29-1A8MX34 341 aaPredicted RBP7.32□□□□□ -1.24
HLCS-207ENST00000612277 C10orf95Q9H7T3 257 aa7.3□□□□□ -1.24
HLCS-207ENST00000612277 ANKRD17O75179 2603 aaKnown RBP7.3□□□□□ -1.24
HLCS-207ENST00000612277 MTORP42345 2549 aa7.29□□□□□ -1.24
HLCS-207ENST00000612277 A0A087X002 238 aa7.27□□□□□ -1.25
HLCS-207ENST00000612277 UNC80Q8N2C7 3258 aa7.25□□□□□ -1.25
HLCS-207ENST00000612277 CHD8Q9HCK8 2581 aa7.24□□□□□ -1.25
HLCS-207ENST00000612277 CDH23Q9H251 3354 aa7.24□□□□□ -1.25
HLCS-207ENST00000612277 A8MUU9 505 aa7.23□□□□□ -1.25
HLCS-207ENST00000612277 POLQO75417 2590 aa7.23□□□□□ -1.25
HLCS-207ENST00000612277 PRUNE2Q8WUY3 3088 aa7.23□□□□□ -1.25
HLCS-207ENST00000612277 SPTBN4Q9H254 2564 aa7.22□□□□□ -1.25
HLCS-207ENST00000612277 ACANP16112 2415 aa7.18□□□□□ -1.26
HLCS-207ENST00000612277 TNP1P09430 55 aa7.17□□□□□ -1.26
HLCS-207ENST00000612277 KRTAP1-3Q8IUG1 177 aa7.17□□□□□ -1.26
HLCS-207ENST00000612277 KRTAP11-1Q8IUC1 163 aa7.16□□□□□ -1.26
HLCS-207ENST00000612277 Q5VSD8 79 aa7.14□□□□□ -1.27
HLCS-207ENST00000612277 VCANP13611 3396 aa7.14□□□□□ -1.27
HLCS-207ENST00000612277 LCE6AA0A183 80 aa7.13□□□□□ -1.27
HLCS-207ENST00000612277 KRTAP1-1Q07627 177 aa7.13□□□□□ -1.27
HLCS-207ENST00000612277 CFAP54Q96N23 3096 aa7.12□□□□□ -1.27
HLCS-207ENST00000612277 BPTFQ12830 3046 aa7.12□□□□□ -1.27
HLCS-207ENST00000612277 TRIOO75962 3097 aa7.11□□□□□ -1.27
HLCS-207ENST00000612277 NOTCH2NLQ7Z3S9 236 aa7.1□□□□□ -1.27
HLCS-207ENST00000612277 C5orf42Q9H799 3197 aa7.1□□□□□ -1.27
HLCS-207ENST00000612277 FASNP49327 2511 aaKnown RBP7.1□□□□□ -1.27
HLCS-207ENST00000612277 KRTAP4-16G5E9R7 235 aaPredicted RBP7.09□□□□□ -1.27
HLCS-207ENST00000612277 FREM2Q5SZK8 3169 aa7.08□□□□□ -1.28
HLCS-207ENST00000612277 PP632Q6XCG6 107 aa7.06□□□□□ -1.28
HLCS-207ENST00000612277 KRTAP10-1P60331 282 aa7.04□□□□□ -1.28
HLCS-207ENST00000612277 NBEAQ8NFP9 2946 aa7.03□□□□□ -1.28
HLCS-207ENST00000612277 KRTAP1-5Q9BYS1 174 aa7.02□□□□□ -1.29
HLCS-207ENST00000612277 VPS13AQ96RL7 3174 aa7.02□□□□□ -1.29
HLCS-207ENST00000612277 MAP1AP78559 2803 aaPredicted RBP7.02□□□□□ -1.29
HLCS-207ENST00000612277 CENPEQ02224 2701 aa7.02□□□□□ -1.29
HLCS-207ENST00000612277 FLNBO75369 2602 aaKnown RBP7□□□□□ -1.29
HLCS-207ENST00000612277 SPEGQ15772 3267 aa6.99□□□□□ -1.29
HLCS-207ENST00000612277 RPS29P62273 56 aaKnown RBP6.99□□□□□ -1.29
HLCS-207ENST00000612277 EPG5Q9HCE0 2579 aa6.97□□□□□ -1.29
HLCS-207ENST00000612277 KRTAP10-2P60368 255 aa6.97□□□□□ -1.29
HLCS-207ENST00000612277 HTTP42858 3142 aa6.96□□□□□ -1.29
HLCS-207ENST00000612277 P0C880 135 aa6.93□□□□□ -1.3
HLCS-207ENST00000612277 WDFY4Q6ZS81 3184 aa6.93□□□□□ -1.3
HLCS-207ENST00000612277 CHD7Q9P2D1 2997 aa6.92□□□□□ -1.3
HLCS-207ENST00000612277 FRYQ5TBA9 3013 aa6.89□□□□□ -1.31
HLCS-207ENST00000612277 USP24Q9UPU5 2620 aa6.87□□□□□ -1.31
HLCS-207ENST00000612277 DNAH14Q0VDD8 3507 aa6.86□□□□□ -1.31
HLCS-207ENST00000612277 FLG2Q5D862 2391 aaPredicted RBP6.86□□□□□ -1.31
HLCS-207ENST00000612277 MGAM2Q2M2H8 2515 aa6.86□□□□□ -1.31
HLCS-207ENST00000612277 ATRQ13535 2644 aa6.86□□□□□ -1.31
HLCS-207ENST00000612277 TRANK1O15050 2925 aa6.85□□□□□ -1.31
HLCS-207ENST00000612277 CELSR3Q9NYQ7 3312 aa6.84□□□□□ -1.31
HLCS-207ENST00000612277 HECTD1Q9ULT8 2610 aa6.83□□□□□ -1.32
HLCS-207ENST00000612277 LAMA1P25391 3075 aa6.8□□□□□ -1.32
HLCS-207ENST00000612277 KRTAP10-8P60410 259 aa6.8□□□□□ -1.32
HLCS-207ENST00000612277 USP34Q70CQ2 3546 aa6.8□□□□□ -1.32
HLCS-207ENST00000612277 SZT2Q5T011 3432 aa6.79□□□□□ -1.32
HLCS-207ENST00000612277 FLNAP21333 2647 aaKnown RBP6.77□□□□□ -1.33
HLCS-207ENST00000612277 FRYLO94915 3013 aa6.77□□□□□ -1.33
HLCS-207ENST00000612277 Q6ZRN7 208 aaPredicted RBP6.77□□□□□ -1.33
HLCS-207ENST00000612277 DSPP15924 2871 aaKnown RBP6.77□□□□□ -1.33
HLCS-207ENST00000612277 MAST4O15021 2626 aa6.77□□□□□ -1.33
HLCS-207ENST00000612277 COL6A3P12111 3177 aa6.76□□□□□ -1.33
HLCS-207ENST00000612277 H0YAA0 97 aa6.75□□□□□ -1.33
HLCS-207ENST00000612277 KRTAP13-2Q52LG2 175 aa6.73□□□□□ -1.33
HLCS-207ENST00000612277 ITPR3Q14573 2671 aa6.71□□□□□ -1.34
HLCS-207ENST00000612277 CFAP47Q6ZTR5 3102 aa6.7□□□□□ -1.34
HLCS-207ENST00000612277 DMBT1Q9UGM3 2413 aaPredicted RBP6.69□□□□□ -1.34
HLCS-207ENST00000612277 KRTAP13-1Q8IUC0 172 aa6.68□□□□□ -1.34
HLCS-207ENST00000612277 KRTAP7-1Q8IUC3 87 aa6.67□□□□□ -1.34
HLCS-207ENST00000612277 CHD9Q3L8U1 2897 aa6.65□□□□□ -1.34
HLCS-207ENST00000612277 BOD1L1Q8NFC6 3051 aa6.64□□□□□ -1.35
HLCS-207ENST00000612277 MGAQ8IWI9 3026 aa6.64□□□□□ -1.35
HLCS-207ENST00000612277 MYO15AQ9UKN7 3530 aa6.64□□□□□ -1.35
HLCS-207ENST00000612277 AKAP13Q12802 2813 aa6.62□□□□□ -1.35
HLCS-207ENST00000612277 EYSQ5T1H1 3165 aa6.61□□□□□ -1.35
HLCS-207ENST00000612277 REV3LO60673 3130 aa6.59□□□□□ -1.35
HLCS-207ENST00000612277 DMXL2Q8TDJ6 3036 aa6.58□□□□□ -1.36
HLCS-207ENST00000612277 ATMQ13315 3056 aa6.58□□□□□ -1.36
HLCS-207ENST00000612277 SETXQ7Z333 2677 aaKnown RBP6.58□□□□□ -1.36
HLCS-207ENST00000612277 HELZ2Q9BYK8 2649 aaKnown RBP6.57□□□□□ -1.36
HLCS-207ENST00000612277 PRO2289Q9P1D8 64 aa6.52□□□□□ -1.37
HLCS-207ENST00000612277 TEP1Q99973 2627 aaKnown RBP6.52□□□□□ -1.37
HLCS-207ENST00000612277 NBEAL1Q6ZS30 2694 aa6.51□□□□□ -1.37
HLCS-207ENST00000612277 ZZEF1O43149 2961 aa6.51□□□□□ -1.37
HLCS-207ENST00000612277 COL12A1Q99715 3063 aa6.51□□□□□ -1.37
HLCS-207ENST00000612277 A0A1B0GVY2 172 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms