RNA–Protein interactions for RNA: ENST00000606347.1

UCHL3-204, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-204ENST00000606347 RPS27P42677 84 aaKnown RBP0.51□□□□□ -2.33
UCHL3-204ENST00000606347 RPS27LQ71UM5 84 aaKnown RBP0.51□□□□□ -2.33
UCHL3-204ENST00000606347 TMEM167BQ9NRX6 74 aa0.51□□□□□ -2.33
UCHL3-204ENST00000606347 BPTFQ12830 3046 aa0.51□□□□□ -2.33
UCHL3-204ENST00000606347 GVINP1Q7Z2Y8 2422 aa0.5□□□□□ -2.33
UCHL3-204ENST00000606347 IQGAP2Q13576 1575 aa0.5□□□□□ -2.33
UCHL3-204ENST00000606347 LYNX1G3V0Z9 82 aa0.5□□□□□ -2.33
UCHL3-204ENST00000606347 WFDC10BQ8IUB3 73 aa0.5□□□□□ -2.33
UCHL3-204ENST00000606347 APCP25054 2843 aa0.5□□□□□ -2.33
UCHL3-204ENST00000606347 KIAA0586Q9BVV6 1533 aa0.49□□□□□ -2.33
UCHL3-204ENST00000606347 CHD9Q3L8U1 2897 aa0.49□□□□□ -2.33
UCHL3-204ENST00000606347 PRLHP81277 87 aa0.49□□□□□ -2.33
UCHL3-204ENST00000606347 DEFB109BQ30KR1 87 aa0.49□□□□□ -2.33
UCHL3-204ENST00000606347 KAAG1Q9UBP8 84 aa0.49□□□□□ -2.33
UCHL3-204ENST00000606347 DDX60Q8IY21 1712 aaKnown RBP0.49□□□□□ -2.33
UCHL3-204ENST00000606347 ANK2Q01484 3957 aa0.49□□□□□ -2.33
UCHL3-204ENST00000606347 NCOR1O75376 2440 aa0.48□□□□□ -2.33
UCHL3-204ENST00000606347 SMIM2Q9BVW6 85 aa0.48□□□□□ -2.33
UCHL3-204ENST00000606347 LMO7Q8WWI1 1683 aa0.48□□□□□ -2.33
UCHL3-204ENST00000606347 FAM208AQ9UK61 1670 aaKnown RBP0.48□□□□□ -2.33
UCHL3-204ENST00000606347 CSMD3Q7Z407 3707 aa0.48□□□□□ -2.33
UCHL3-204ENST00000606347 AKAP6Q13023 2319 aa0.48□□□□□ -2.33
UCHL3-204ENST00000606347 PDE4DIPQ5VU43 2346 aa0.48□□□□□ -2.33
UCHL3-204ENST00000606347 NFAT5O94916 1531 aa0.48□□□□□ -2.33
UCHL3-204ENST00000606347 BDP1A6H8Y1 2624 aa0.48□□□□□ -2.33
UCHL3-204ENST00000606347 IQGAP1P46940 1657 aa0.47□□□□□ -2.33
UCHL3-204ENST00000606347 ABCA12Q86UK0 2595 aa0.47□□□□□ -2.33
UCHL3-204ENST00000606347 WT1-ASQ06250 92 aa0.47□□□□□ -2.33
UCHL3-204ENST00000606347 CDC42BPAQ5VT25 1732 aa0.47□□□□□ -2.33
UCHL3-204ENST00000606347 REV3LO60673 3130 aa0.47□□□□□ -2.33
UCHL3-204ENST00000606347 KRTAP2-3P0C7H8 128 aa0.46□□□□□ -2.34
UCHL3-204ENST00000606347 DEFB106AQ8N104 65 aa0.46□□□□□ -2.34
UCHL3-204ENST00000606347 KRTAP2-4Q9BYR9 128 aa0.46□□□□□ -2.34
UCHL3-204ENST00000606347 KRTAP2-1Q9BYU5 128 aa0.46□□□□□ -2.34
UCHL3-204ENST00000606347 S4R3F8 94 aa0.46□□□□□ -2.34
UCHL3-204ENST00000606347 TPRP12270 2363 aaKnown RBP0.46□□□□□ -2.34
UCHL3-204ENST00000606347 KIF21BO75037 1637 aa0.46□□□□□ -2.34
UCHL3-204ENST00000606347 USP24Q9UPU5 2620 aa0.45□□□□□ -2.34
UCHL3-204ENST00000606347 TRPM2O94759 1503 aa0.45□□□□□ -2.34
UCHL3-204ENST00000606347 NDUFA1O15239 70 aa0.45□□□□□ -2.34
UCHL3-204ENST00000606347 PCNX1Q96RV3 2341 aa0.45□□□□□ -2.34
UCHL3-204ENST00000606347 VWFP04275 2813 aa0.45□□□□□ -2.34
UCHL3-204ENST00000606347 SNRPGP62308 76 aaKnown RBP0.44□□□□□ -2.34
UCHL3-204ENST00000606347 SPINK6Q6UWN8 80 aa0.44□□□□□ -2.34
UCHL3-204ENST00000606347 PIEZO1Q92508 2521 aa0.44□□□□□ -2.34
UCHL3-204ENST00000606347 CSPG4Q6UVK1 2322 aa0.44□□□□□ -2.34
UCHL3-204ENST00000606347 ABCA2Q9BZC7 2435 aa0.44□□□□□ -2.34
UCHL3-204ENST00000606347 ALMS1Q8TCU4 4167 aa0.43□□□□□ -2.34
UCHL3-204ENST00000606347 SPINK1P00995 79 aa0.43□□□□□ -2.34
UCHL3-204ENST00000606347 SMR3AQ99954 134 aa0.43□□□□□ -2.34
UCHL3-204ENST00000606347 IGF2RP11717 2491 aa0.43□□□□□ -2.34
UCHL3-204ENST00000606347 CHD6Q8TD26 2715 aa0.43□□□□□ -2.34
UCHL3-204ENST00000606347 BSNQ9UPA5 3926 aa0.43□□□□□ -2.34
UCHL3-204ENST00000606347 H3BUA1 57 aa0.41□□□□□ -2.34
UCHL3-204ENST00000606347 DEFB135Q30KP9 77 aa0.41□□□□□ -2.34
UCHL3-204ENST00000606347 ATP7AQ04656 1500 aa0.41□□□□□ -2.34
UCHL3-204ENST00000606347 MUC5ACP98088 5654 aa0.41□□□□□ -2.34
UCHL3-204ENST00000606347 ATRQ13535 2644 aa0.41□□□□□ -2.34
UCHL3-204ENST00000606347 OTOGQ6ZRI0 2925 aa0.41□□□□□ -2.34
UCHL3-204ENST00000606347 NAV2Q8IVL1 2488 aa0.4□□□□□ -2.35
UCHL3-204ENST00000606347 MMP24-AS1A0A0U1RRL7 71 aa0.4□□□□□ -2.35
UCHL3-204ENST00000606347 H0YGG7 62 aa0.4□□□□□ -2.35
UCHL3-204ENST00000606347 KRTAP21-1Q3LI58 79 aa0.4□□□□□ -2.35
UCHL3-204ENST00000606347 DSPP15924 2871 aaKnown RBP0.39□□□□□ -2.35
UCHL3-204ENST00000606347 M0R2T5 61 aa0.39□□□□□ -2.35
UCHL3-204ENST00000606347 PRM1P04553 51 aa0.39□□□□□ -2.35
UCHL3-204ENST00000606347 RPL39P62891 51 aaKnown RBP0.39□□□□□ -2.35
UCHL3-204ENST00000606347 FAT2Q9NYQ8 4349 aa0.39□□□□□ -2.35
UCHL3-204ENST00000606347 SAMD9LQ8IVG5 1584 aa0.39□□□□□ -2.35
UCHL3-204ENST00000606347 SPTA1P02549 2419 aa0.38□□□□□ -2.35
UCHL3-204ENST00000606347 EP300Q09472 2414 aaPredicted RBP0.38□□□□□ -2.35
UCHL3-204ENST00000606347 IGLV5-48A0A075B6I7 105 aa0.38□□□□□ -2.35
UCHL3-204ENST00000606347 LEAP2Q969E1 77 aa0.38□□□□□ -2.35
UCHL3-204ENST00000606347 U3KQA8 63 aa0.38□□□□□ -2.35
UCHL3-204ENST00000606347 SYNE1Q8NF91 8797 aaKnown RBP0.38□□□□□ -2.35
UCHL3-204ENST00000606347 A8MTW9 85 aa0.37□□□□□ -2.35
UCHL3-204ENST00000606347 RPL39LQ96EH5 51 aaKnown RBP0.37□□□□□ -2.35
UCHL3-204ENST00000606347 CHD8Q9HCK8 2581 aa0.37□□□□□ -2.35
UCHL3-204ENST00000606347 PKD1L2Q7Z442 2459 aa0.37□□□□□ -2.35
UCHL3-204ENST00000606347 TNXBP22105 4242 aa0.37□□□□□ -2.35
UCHL3-204ENST00000606347 TENM4Q6N022 2769 aa0.36□□□□□ -2.35
UCHL3-204ENST00000606347 CELSR1Q9NYQ6 3014 aa0.36□□□□□ -2.35
UCHL3-204ENST00000606347 PRKDCP78527 4128 aaKnown RBP0.36□□□□□ -2.35
UCHL3-204ENST00000606347 DEFB131AP59861 70 aa0.36□□□□□ -2.35
UCHL3-204ENST00000606347 DEFB104AQ8WTQ1 72 aa0.36□□□□□ -2.35
UCHL3-204ENST00000606347 NOP10Q9NPE3 64 aaKnown RBP0.36□□□□□ -2.35
UCHL3-204ENST00000606347 TRANK1O15050 2925 aa0.36□□□□□ -2.35
UCHL3-204ENST00000606347 DUOX1Q9NRD9 1551 aa0.36□□□□□ -2.35
UCHL3-204ENST00000606347 NBASA2RRP1 2371 aa0.35□□□□□ -2.35
UCHL3-204ENST00000606347 ZFYVE26Q68DK2 2539 aa0.35□□□□□ -2.35
UCHL3-204ENST00000606347 CLTCL1P53675 1640 aa0.35□□□□□ -2.35
UCHL3-204ENST00000606347 H3BNG1 76 aa0.35□□□□□ -2.35
UCHL3-204ENST00000606347 POLR2KP53803 58 aaKnown RBP0.35□□□□□ -2.35
UCHL3-204ENST00000606347 FAT4Q6V0I7 4981 aa0.35□□□□□ -2.35
UCHL3-204ENST00000606347 M0QY20 66 aa0.34□□□□□ -2.36
UCHL3-204ENST00000606347 CLPSL2Q6UWE3 100 aa0.34□□□□□ -2.36
UCHL3-204ENST00000606347 HECTD1Q9ULT8 2610 aa0.34□□□□□ -2.36
UCHL3-204ENST00000606347 PRRC2CQ9Y520 2896 aaKnown RBP0.34□□□□□ -2.36
UCHL3-204ENST00000606347 CREBBPQ92793 2442 aa0.34□□□□□ -2.36
UCHL3-204ENST00000606347 UNC79Q9P2D8 2635 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms