RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 Q6ZSA8 131 aa11.76□□□□□ -0.53
TUBB4B-202ENST00000604929 LINC00336Q6ZUF6 198 aa11.74□□□□□ -0.53
TUBB4B-202ENST00000604929 LRP1BQ9NZR2 4599 aa11.73□□□□□ -0.53
TUBB4B-202ENST00000604929 A0A0G2JQZ4 141 aa11.7□□□□□ -0.54
TUBB4B-202ENST00000604929 F8WEM9 126 aa11.69□□□□□ -0.54
TUBB4B-202ENST00000604929 ZNF861PO60384 105 aa11.69□□□□□ -0.54
TUBB4B-202ENST00000604929 LINC00643Q86TS7 51 aa11.69□□□□□ -0.54
TUBB4B-202ENST00000604929 IGLV7-43P04211 117 aa11.66□□□□□ -0.54
TUBB4B-202ENST00000604929 SPRR1BP22528 89 aa11.65□□□□□ -0.54
TUBB4B-202ENST00000604929 A0A1B0GVY2 172 aa11.65□□□□□ -0.54
TUBB4B-202ENST00000604929 UBL5Q9BZL1 73 aa11.65□□□□□ -0.54
TUBB4B-202ENST00000604929 A0A1W2PNM2 257 aa11.64□□□□□ -0.55
TUBB4B-202ENST00000604929 IGKV3D-7A0A0C4DH55 119 aa11.64□□□□□ -0.55
TUBB4B-202ENST00000604929 SPRR4Q96PI1 79 aa11.64□□□□□ -0.55
TUBB4B-202ENST00000604929 ANAPC11Q9NYG5 84 aa11.63□□□□□ -0.55
TUBB4B-202ENST00000604929 IGFL1Q6UW32 110 aa11.62□□□□□ -0.55
TUBB4B-202ENST00000604929 DYNC1H1Q14204 4646 aaKnown RBP11.61□□□□□ -0.55
TUBB4B-202ENST00000604929 Q6ZVQ6 151 aa11.6□□□□□ -0.55
TUBB4B-202ENST00000604929 IGLV9-49A0A0B4J1Y8 123 aa11.59□□□□□ -0.55
TUBB4B-202ENST00000604929 RYR3Q15413 4870 aa11.58□□□□□ -0.56
TUBB4B-202ENST00000604929 IGLV8-61A0A075B6I0 122 aa11.58□□□□□ -0.56
TUBB4B-202ENST00000604929 Q8NBF4 154 aa11.58□□□□□ -0.56
TUBB4B-202ENST00000604929 VPS13BQ7Z7G8 4022 aa11.57□□□□□ -0.56
TUBB4B-202ENST00000604929 ZNF706Q9Y5V0 76 aaPredicted RBP11.57□□□□□ -0.56
TUBB4B-202ENST00000604929 Q6JHZ5 121 aa11.57□□□□□ -0.56
TUBB4B-202ENST00000604929 TRBV7-7A0A0K0K1E9 115 aa11.56□□□□□ -0.56
TUBB4B-202ENST00000604929 C21orf62-AS1Q17RA5 79 aa11.55□□□□□ -0.56
TUBB4B-202ENST00000604929 LINC00483Q53H64 154 aa11.55□□□□□ -0.56
TUBB4B-202ENST00000604929 PCP4P48539 62 aa11.55□□□□□ -0.56
TUBB4B-202ENST00000604929 NREPQ16612 68 aa11.53□□□□□ -0.56
TUBB4B-202ENST00000604929 C9orf153Q5TBE3 101 aa11.53□□□□□ -0.56
TUBB4B-202ENST00000604929 SCGB1A1P11684 91 aa11.52□□□□□ -0.57
TUBB4B-202ENST00000604929 CRYGAP11844 174 aa11.52□□□□□ -0.57
TUBB4B-202ENST00000604929 Q6Q795 121 aa11.52□□□□□ -0.57
TUBB4B-202ENST00000604929 SMR3BP02814 79 aaPredicted RBP11.51□□□□□ -0.57
TUBB4B-202ENST00000604929 IMUPQ9GZP8 106 aa11.5□□□□□ -0.57
TUBB4B-202ENST00000604929 HIST1H4AP62805 103 aaKnown RBP11.5□□□□□ -0.57
TUBB4B-202ENST00000604929 A0A087WVE0 104 aa11.48□□□□□ -0.57
TUBB4B-202ENST00000604929 A0A087WSZ3 146 aa11.47□□□□□ -0.57
TUBB4B-202ENST00000604929 A0A1B0GW54 56 aa11.47□□□□□ -0.57
TUBB4B-202ENST00000604929 MOBPQ13875 183 aa11.47□□□□□ -0.57
TUBB4B-202ENST00000604929 ATP5EP2Q5VTU8 51 aa11.46□□□□□ -0.57
TUBB4B-202ENST00000604929 APOBP04114 4563 aaKnown RBP11.46□□□□□ -0.58
TUBB4B-202ENST00000604929 HRCT1Q6UXD1 115 aa11.44□□□□□ -0.58
TUBB4B-202ENST00000604929 FAM236AA0A1B0GUQ0 79 aa11.42□□□□□ -0.58
TUBB4B-202ENST00000604929 FAM236BA0A1B0GV22 79 aa11.42□□□□□ -0.58
TUBB4B-202ENST00000604929 RPL37AP61513 92 aaKnown RBP11.42□□□□□ -0.58
TUBB4B-202ENST00000604929 CXCL6P80162 114 aa11.42□□□□□ -0.58
TUBB4B-202ENST00000604929 FAT1Q14517 4588 aa11.41□□□□□ -0.58
TUBB4B-202ENST00000604929 BPY2O14599 106 aa11.41□□□□□ -0.58
TUBB4B-202ENST00000604929 DEFB116Q30KQ4 102 aa11.4□□□□□ -0.58
TUBB4B-202ENST00000604929 Q8N9L7 120 aa11.4□□□□□ -0.59
TUBB4B-202ENST00000604929 A0A087X002 238 aa11.37□□□□□ -0.59
TUBB4B-202ENST00000604929 KRTAP1-4P0C5Y4 121 aa11.33□□□□□ -0.6
TUBB4B-202ENST00000604929 ANAPC13Q9BS18 74 aa11.33□□□□□ -0.6
TUBB4B-202ENST00000604929 PLA2G1BP04054 148 aaKnown RBP11.31□□□□□ -0.6
TUBB4B-202ENST00000604929 KRTAP13-2Q52LG2 175 aa11.31□□□□□ -0.6
TUBB4B-202ENST00000604929 DSCR10P59022 87 aa11.3□□□□□ -0.6
TUBB4B-202ENST00000604929 SPINK6Q6UWN8 80 aa11.3□□□□□ -0.6
TUBB4B-202ENST00000604929 IGKV4-1P06312 121 aa11.28□□□□□ -0.6
TUBB4B-202ENST00000604929 SSBP3-AS1Q7Z2R9 100 aa11.28□□□□□ -0.6
TUBB4B-202ENST00000604929 FAM229BQ4G0N7 80 aa11.26□□□□□ -0.61
TUBB4B-202ENST00000604929 LINC00472Q9H8W2 130 aa11.26□□□□□ -0.61
TUBB4B-202ENST00000604929 K7EQZ3 153 aa11.25□□□□□ -0.61
TUBB4B-202ENST00000604929 KRTAP10-4P60372 401 aaPredicted RBP11.25□□□□□ -0.61
TUBB4B-202ENST00000604929 ATOX1O00244 68 aa11.2□□□□□ -0.62
TUBB4B-202ENST00000604929 SS18L2Q9UHA2 77 aa11.19□□□□□ -0.62
TUBB4B-202ENST00000604929 Q96NJ1 140 aa11.19□□□□□ -0.62
TUBB4B-202ENST00000604929 HSPG2P98160 4391 aa11.18□□□□□ -0.62
TUBB4B-202ENST00000604929 EPPK1P58107 5090 aaKnown RBP11.18□□□□□ -0.62
TUBB4B-202ENST00000604929 PRR26Q8N8Z3 221 aa11.18□□□□□ -0.62
TUBB4B-202ENST00000604929 TYMSOSQ8TAI1 123 aa11.18□□□□□ -0.62
TUBB4B-202ENST00000604929 CD164Q04900 197 aa11.16□□□□□ -0.62
TUBB4B-202ENST00000604929 FAM229AH3BQW9 127 aa11.16□□□□□ -0.62
TUBB4B-202ENST00000604929 A8MWP4 228 aa11.13□□□□□ -0.63
TUBB4B-202ENST00000604929 CDK2AP2O75956 126 aa11.13□□□□□ -0.63
TUBB4B-202ENST00000604929 CCDC179H3BU77 68 aa11.13□□□□□ -0.63
TUBB4B-202ENST00000604929 RYR1P21817 5038 aa11.12□□□□□ -0.63
TUBB4B-202ENST00000604929 J3KT08 172 aa11.11□□□□□ -0.63
TUBB4B-202ENST00000604929 PRR15Q8IV56 129 aa11.11□□□□□ -0.63
TUBB4B-202ENST00000604929 KIAA1109Q2LD37 5005 aa11.1□□□□□ -0.63
TUBB4B-202ENST00000604929 Q5VSD8 79 aa11.09□□□□□ -0.63
TUBB4B-202ENST00000604929 C4orf48Q5BLP8 95 aa11.09□□□□□ -0.63
TUBB4B-202ENST00000604929 HCG22E2RYF7 251 aa11.08□□□□□ -0.64
TUBB4B-202ENST00000604929 WFDC13Q8IUB5 93 aa11.08□□□□□ -0.64
TUBB4B-202ENST00000604929 SERP2Q8N6R1 65 aa11.08□□□□□ -0.64
TUBB4B-202ENST00000604929 NDUFB1O75438 58 aa11.08□□□□□ -0.64
TUBB4B-202ENST00000604929 KRTAP17-1Q9BYP8 105 aa11.07□□□□□ -0.64
TUBB4B-202ENST00000604929 COX7CP15954 63 aa11.06□□□□□ -0.64
TUBB4B-202ENST00000604929 IGHV6-1A0A0B4J1U7 121 aa11.03□□□□□ -0.64
TUBB4B-202ENST00000604929 UQCRQO14949 82 aa11.02□□□□□ -0.64
TUBB4B-202ENST00000604929 LINC00304Q8N9R0 145 aa11.01□□□□□ -0.65
TUBB4B-202ENST00000604929 TRAV7A0A075B6U4 112 aa11.01□□□□□ -0.65
TUBB4B-202ENST00000604929 SPINK1P00995 79 aa11□□□□□ -0.65
TUBB4B-202ENST00000604929 ASB16-AS1Q495Z4 193 aa11□□□□□ -0.65
TUBB4B-202ENST00000604929 C1orf195Q5TG92 126 aa11□□□□□ -0.65
TUBB4B-202ENST00000604929 CASC2Q6XLA1 102 aa10.99□□□□□ -0.65
TUBB4B-202ENST00000604929 A0A1B0GVX0 72 aa10.99□□□□□ -0.65
TUBB4B-202ENST00000604929 Q5XG85 94 aa10.99□□□□□ -0.65
TUBB4B-202ENST00000604929 SMIM20Q8N5G0 67 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms