RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 LRBAP50851 2863 aa6.14□□□□□ -1.43
CSMD1-217ENST00000602723 FLNCQ14315 2725 aa6.14□□□□□ -1.43
CSMD1-217ENST00000602723 SMR3BP02814 79 aaPredicted RBP6.14□□□□□ -1.43
CSMD1-217ENST00000602723 PRR26Q8N8Z3 221 aa6.14□□□□□ -1.43
CSMD1-217ENST00000602723 A0A1B0GU33 70 aa6.13□□□□□ -1.43
CSMD1-217ENST00000602723 WIPF1O43516 503 aa6.13□□□□□ -1.43
CSMD1-217ENST00000602723 LINC00483Q53H64 154 aa6.13□□□□□ -1.43
CSMD1-217ENST00000602723 ZNF575Q86XF7 245 aa6.12□□□□□ -1.43
CSMD1-217ENST00000602723 CASC10Q5T4H9 136 aa6.12□□□□□ -1.43
CSMD1-217ENST00000602723 IGLV7-46A0A075B6I9 117 aa6.09□□□□□ -1.43
CSMD1-217ENST00000602723 CHD9Q3L8U1 2897 aa6.09□□□□□ -1.44
CSMD1-217ENST00000602723 H3BS24 57 aa6.08□□□□□ -1.44
CSMD1-217ENST00000602723 HRES1P13985 223 aa6.08□□□□□ -1.44
CSMD1-217ENST00000602723 CAMK2N1Q7Z7J9 78 aa6.07□□□□□ -1.44
CSMD1-217ENST00000602723 FRYQ5TBA9 3013 aa6.07□□□□□ -1.44
CSMD1-217ENST00000602723 FAM229BQ4G0N7 80 aa6.06□□□□□ -1.44
CSMD1-217ENST00000602723 TRIOO75962 3097 aa6.06□□□□□ -1.44
CSMD1-217ENST00000602723 A0A096LNT2 108 aa6.06□□□□□ -1.44
CSMD1-217ENST00000602723 HIVEP1P15822 2718 aa6.05□□□□□ -1.44
CSMD1-217ENST00000602723 KRTAP10-3P60369 221 aa6.04□□□□□ -1.44
CSMD1-217ENST00000602723 CHD7Q9P2D1 2997 aa6.04□□□□□ -1.44
CSMD1-217ENST00000602723 Q5XG85 94 aa6.03□□□□□ -1.44
CSMD1-217ENST00000602723 Q6ZSA8 131 aa6.03□□□□□ -1.44
CSMD1-217ENST00000602723 Q8N9P0 234 aaPredicted RBP6.02□□□□□ -1.45
CSMD1-217ENST00000602723 PRAC1Q96KF2 57 aa6.02□□□□□ -1.45
CSMD1-217ENST00000602723 ASH1LQ9NR48 2969 aaKnown RBP6.02□□□□□ -1.45
CSMD1-217ENST00000602723 FRYLO94915 3013 aa6.01□□□□□ -1.45
CSMD1-217ENST00000602723 DMAC1Q96GE9 116 aa6□□□□□ -1.45
CSMD1-217ENST00000602723 CSAG1Q6PB30 78 aa6□□□□□ -1.45
CSMD1-217ENST00000602723 LINC01558Q9Y6Z2 57 aa6□□□□□ -1.45
CSMD1-217ENST00000602723 KALRNO60229 2985 aa6□□□□□ -1.45
CSMD1-217ENST00000602723 A0A0A0MQY5 61 aa6□□□□□ -1.45
CSMD1-217ENST00000602723 FP248Q71RG6 208 aaPredicted RBP6□□□□□ -1.45
CSMD1-217ENST00000602723 VPS13AQ96RL7 3174 aa5.99□□□□□ -1.45
CSMD1-217ENST00000602723 NF1P21359 2839 aa5.99□□□□□ -1.45
CSMD1-217ENST00000602723 Q5VV11 94 aa5.98□□□□□ -1.45
CSMD1-217ENST00000602723 S4R3F8 94 aa5.98□□□□□ -1.45
CSMD1-217ENST00000602723 UTRNP46939 3433 aa5.98□□□□□ -1.45
CSMD1-217ENST00000602723 CYSTM1Q9H1C7 97 aa5.97□□□□□ -1.45
CSMD1-217ENST00000602723 MMP24-AS1A0A0U1RRL7 71 aa5.97□□□□□ -1.45
CSMD1-217ENST00000602723 ZCCHC13Q8WW36 166 aaKnown RBP5.97□□□□□ -1.45
CSMD1-217ENST00000602723 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.97□□□□□ -1.45
CSMD1-217ENST00000602723 TENM1Q9UKZ4 2725 aa5.96□□□□□ -1.46
CSMD1-217ENST00000602723 CELSR2Q9HCU4 2923 aa5.95□□□□□ -1.46
CSMD1-217ENST00000602723 M0R2T5 61 aa5.94□□□□□ -1.46
CSMD1-217ENST00000602723 SPINK7P58062 85 aa5.94□□□□□ -1.46
CSMD1-217ENST00000602723 Q5W150 140 aa5.94□□□□□ -1.46
CSMD1-217ENST00000602723 TACC2O95359 2948 aa5.92□□□□□ -1.46
CSMD1-217ENST00000602723 TENM3Q9P273 2699 aa5.91□□□□□ -1.46
CSMD1-217ENST00000602723 NBEAQ8NFP9 2946 aa5.91□□□□□ -1.46
CSMD1-217ENST00000602723 TNP2Q05952 138 aa5.91□□□□□ -1.46
CSMD1-217ENST00000602723 NIPBLQ6KC79 2804 aaeCLIP5.9□□□□□ -1.47
CSMD1-217ENST00000602723 PRUNE2Q8WUY3 3088 aa5.88□□□□□ -1.47
CSMD1-217ENST00000602723 DMXL2Q8TDJ6 3036 aa5.88□□□□□ -1.47
CSMD1-217ENST00000602723 KRTAP1-3Q8IUG1 177 aa5.88□□□□□ -1.47
CSMD1-217ENST00000602723 LINC00472Q9H8W2 130 aa5.88□□□□□ -1.47
CSMD1-217ENST00000602723 WDFY4Q6ZS81 3184 aa5.88□□□□□ -1.47
CSMD1-217ENST00000602723 Q8NDZ9 215 aa5.87□□□□□ -1.47
CSMD1-217ENST00000602723 R4GN34 69 aa5.87□□□□□ -1.47
CSMD1-217ENST00000602723 ROMO1P60602 79 aa5.86□□□□□ -1.47
CSMD1-217ENST00000602723 SPRR1AP35321 89 aa5.86□□□□□ -1.47
CSMD1-217ENST00000602723 KRTAP1-1Q07627 177 aa5.86□□□□□ -1.47
CSMD1-217ENST00000602723 PLAC8Q9NZF1 115 aa5.85□□□□□ -1.47
CSMD1-217ENST00000602723 FREM2Q5SZK8 3169 aa5.84□□□□□ -1.47
CSMD1-217ENST00000602723 RPL37P61927 97 aaKnown RBP5.83□□□□□ -1.48
CSMD1-217ENST00000602723 CRYBG3Q68DQ2 2970 aa5.82□□□□□ -1.48
CSMD1-217ENST00000602723 RANBP2P49792 3224 aaKnown RBP5.81□□□□□ -1.48
CSMD1-217ENST00000602723 ZZEF1O43149 2961 aa5.81□□□□□ -1.48
CSMD1-217ENST00000602723 OXTP01178 125 aa5.8□□□□□ -1.48
CSMD1-217ENST00000602723 COL12A1Q99715 3063 aa5.8□□□□□ -1.48
CSMD1-217ENST00000602723 ZANQ9Y493 2812 aa5.8□□□□□ -1.48
CSMD1-217ENST00000602723 H1FX-AS1Q4G0G2 97 aa5.8□□□□□ -1.48
CSMD1-217ENST00000602723 SPRR1BP22528 89 aa5.79□□□□□ -1.48
CSMD1-217ENST00000602723 TNRC18O15417 2968 aaPredicted RBP5.78□□□□□ -1.48
CSMD1-217ENST00000602723 PDZD2O15018 2839 aa5.77□□□□□ -1.49
CSMD1-217ENST00000602723 M0QZ58 72 aa5.77□□□□□ -1.49
CSMD1-217ENST00000602723 ASB16-AS1Q495Z4 193 aa5.76□□□□□ -1.49
CSMD1-217ENST00000602723 KRTAP26-1Q6PEX3 210 aa5.75□□□□□ -1.49
CSMD1-217ENST00000602723 DCHS2Q6V1P9 2916 aa5.75□□□□□ -1.49
CSMD1-217ENST00000602723 Q6ZR54 194 aa5.75□□□□□ -1.49
CSMD1-217ENST00000602723 SEC61BP60468 96 aaKnown RBP5.73□□□□□ -1.49
CSMD1-217ENST00000602723 HTTP42858 3142 aa5.71□□□□□ -1.5
CSMD1-217ENST00000602723 ADM2Q7Z4H4 148 aa5.71□□□□□ -1.5
CSMD1-217ENST00000602723 SPATA8Q6RVD6 105 aa5.7□□□□□ -1.5
CSMD1-217ENST00000602723 KRTAP1-5Q9BYS1 174 aa5.7□□□□□ -1.5
CSMD1-217ENST00000602723 LAMA1P25391 3075 aa5.7□□□□□ -1.5
CSMD1-217ENST00000602723 TENM4Q6N022 2769 aa5.69□□□□□ -1.5
CSMD1-217ENST00000602723 PANO1I0J062 215 aa5.68□□□□□ -1.5
CSMD1-217ENST00000602723 TGP01266 2768 aa5.68□□□□□ -1.5
CSMD1-217ENST00000602723 KRTAP16-1A8MUX0 517 aa5.67□□□□□ -1.5
CSMD1-217ENST00000602723 MKI67P46013 3256 aaKnown RBP5.67□□□□□ -1.5
CSMD1-217ENST00000602723 Q5VSD8 79 aa5.67□□□□□ -1.5
CSMD1-217ENST00000602723 FBN2P35556 2912 aa5.67□□□□□ -1.5
CSMD1-217ENST00000602723 PLAC4Q8WY50 150 aa5.65□□□□□ -1.5
CSMD1-217ENST00000602723 XIRP2A4UGR9 3374 aa5.65□□□□□ -1.5
CSMD1-217ENST00000602723 VWFP04275 2813 aa5.64□□□□□ -1.51
CSMD1-217ENST00000602723 KRTAP29-1A8MX34 341 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-217ENST00000602723 KRTAP10-1P60331 282 aa5.62□□□□□ -1.51
CSMD1-217ENST00000602723 KRTAP4-16G5E9R7 235 aaPredicted RBP5.62□□□□□ -1.51
CSMD1-217ENST00000602723 REV3LO60673 3130 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms