RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 Q6ZQY7 126 aa9.85□□□□□ -0.83
SHKBP1-204ENST00000594862 SNCGO76070 127 aa9.84□□□□□ -0.83
SHKBP1-204ENST00000594862 RAB37Q96AX2 223 aa9.84□□□□□ -0.83
SHKBP1-204ENST00000594862 A0A0B4J2C4 111 aa9.83□□□□□ -0.84
SHKBP1-204ENST00000594862 XP32Q5T750 250 aa9.83□□□□□ -0.84
SHKBP1-204ENST00000594862 Q6JHZ5 121 aa9.83□□□□□ -0.84
SHKBP1-204ENST00000594862 FAT4Q6V0I7 4981 aa9.82□□□□□ -0.84
SHKBP1-204ENST00000594862 TMEM238LA0A1B0GVL6 79 aa9.81□□□□□ -0.84
SHKBP1-204ENST00000594862 A6NJY4 79 aa9.81□□□□□ -0.84
SHKBP1-204ENST00000594862 TCL1BO95988 128 aa9.81□□□□□ -0.84
SHKBP1-204ENST00000594862 MUC17Q685J3 4493 aa9.81□□□□□ -0.84
SHKBP1-204ENST00000594862 CFC1BP0CG36 223 aa9.8□□□□□ -0.84
SHKBP1-204ENST00000594862 CFC1P0CG37 223 aa9.8□□□□□ -0.84
SHKBP1-204ENST00000594862 H0YGX0 51 aa9.79□□□□□ -0.84
SHKBP1-204ENST00000594862 C2orf91Q6ZV80 131 aa9.79□□□□□ -0.84
SHKBP1-204ENST00000594862 IGLV8-61A0A075B6I0 122 aa9.78□□□□□ -0.84
SHKBP1-204ENST00000594862 OCIAD2Q56VL3 154 aa9.78□□□□□ -0.84
SHKBP1-204ENST00000594862 CLEC2BQ92478 149 aa9.78□□□□□ -0.84
SHKBP1-204ENST00000594862 CEND1Q8N111 149 aa9.76□□□□□ -0.85
SHKBP1-204ENST00000594862 GHRHP01286 108 aa9.75□□□□□ -0.85
SHKBP1-204ENST00000594862 C1orf195Q5TG92 126 aa9.75□□□□□ -0.85
SHKBP1-204ENST00000594862 SNHG12Q9BXW3 62 aa9.75□□□□□ -0.85
SHKBP1-204ENST00000594862 KRTAP9-6A0A140TA67 174 aa9.74□□□□□ -0.85
SHKBP1-204ENST00000594862 A0A0G2JQZ4 141 aa9.73□□□□□ -0.85
SHKBP1-204ENST00000594862 PRO1854Q9UHT4 67 aa9.73□□□□□ -0.85
SHKBP1-204ENST00000594862 A0A1B0GX51 115 aa9.71□□□□□ -0.86
SHKBP1-204ENST00000594862 IGFL1Q6UW32 110 aa9.71□□□□□ -0.86
SHKBP1-204ENST00000594862 TRBV7-7A0A0K0K1E9 115 aa9.7□□□□□ -0.86
SHKBP1-204ENST00000594862 C9orf92A6NGG3 77 aa9.7□□□□□ -0.86
SHKBP1-204ENST00000594862 PYY3Q5JQD4 70 aa9.7□□□□□ -0.86
SHKBP1-204ENST00000594862 HSD52Q0P140 79 aa9.69□□□□□ -0.86
SHKBP1-204ENST00000594862 FXYD2P54710 66 aa9.66□□□□□ -0.86
SHKBP1-204ENST00000594862 FAM218AQ96MZ4 157 aa9.64□□□□□ -0.87
SHKBP1-204ENST00000594862 SS18L2Q9UHA2 77 aa9.64□□□□□ -0.87
SHKBP1-204ENST00000594862 H3BUT2 72 aa9.63□□□□□ -0.87
SHKBP1-204ENST00000594862 NDUFV3P56181 108 aaKnown RBP9.63□□□□□ -0.87
SHKBP1-204ENST00000594862 UQCR10Q9UDW1 63 aa9.63□□□□□ -0.87
SHKBP1-204ENST00000594862 TMA7Q9Y2S6 64 aaKnown RBP9.63□□□□□ -0.87
SHKBP1-204ENST00000594862 H3BQ85 93 aa9.62□□□□□ -0.87
SHKBP1-204ENST00000594862 Q6Q795 121 aa9.62□□□□□ -0.87
SHKBP1-204ENST00000594862 TRIAP1O43715 76 aa9.61□□□□□ -0.87
SHKBP1-204ENST00000594862 PCOTHQ58A44 107 aa9.61□□□□□ -0.87
SHKBP1-204ENST00000594862 KRTAP4-1Q9BYQ7 146 aa9.61□□□□□ -0.87
SHKBP1-204ENST00000594862 DNAL4O96015 105 aa9.6□□□□□ -0.87
SHKBP1-204ENST00000594862 COX6CP09669 75 aa9.6□□□□□ -0.87
SHKBP1-204ENST00000594862 TEN1Q86WV5 123 aa9.6□□□□□ -0.87
SHKBP1-204ENST00000594862 LST1O00453 97 aa9.59□□□□□ -0.87
SHKBP1-204ENST00000594862 PSMB2P49721 201 aa9.59□□□□□ -0.87
SHKBP1-204ENST00000594862 FABP2P12104 132 aa9.58□□□□□ -0.88
SHKBP1-204ENST00000594862 RPL37P61927 97 aaKnown RBP9.58□□□□□ -0.88
SHKBP1-204ENST00000594862 H3BMG7 143 aa9.57□□□□□ -0.88
SHKBP1-204ENST00000594862 ORMDL1Q9P0S3 153 aa9.55□□□□□ -0.88
SHKBP1-204ENST00000594862 K7ERJ3 54 aa9.54□□□□□ -0.88
SHKBP1-204ENST00000594862 TMEM256-PLSCR3K7ERE1 68 aa9.51□□□□□ -0.89
SHKBP1-204ENST00000594862 A0A087WSZ3 146 aa9.49□□□□□ -0.89
SHKBP1-204ENST00000594862 ANKRD29Q8N6D5 301 aa9.47□□□□□ -0.89
SHKBP1-204ENST00000594862 OBSCN-AS1Q96MR7 158 aa9.47□□□□□ -0.89
SHKBP1-204ENST00000594862 TRACP01848 142 aa9.46□□□□□ -0.9
SHKBP1-204ENST00000594862 TRBV7-4A0A0J9YYF1 115 aa9.45□□□□□ -0.9
SHKBP1-204ENST00000594862 Q75L30 129 aa9.45□□□□□ -0.9
SHKBP1-204ENST00000594862 UBE2V1Q13404 147 aa9.44□□□□□ -0.9
SHKBP1-204ENST00000594862 A0A1W2PNM2 257 aa9.43□□□□□ -0.9
SHKBP1-204ENST00000594862 SCGB1C2P0DMR2 95 aa9.43□□□□□ -0.9
SHKBP1-204ENST00000594862 LCE2DQ5TA82 110 aaPredicted RBP9.43□□□□□ -0.9
SHKBP1-204ENST00000594862 ATP11AUNQ6ZP68 121 aa9.43□□□□□ -0.9
SHKBP1-204ENST00000594862 M0R143 59 aa9.42□□□□□ -0.9
SHKBP1-204ENST00000594862 SMIM6P0DI80 62 aa9.39□□□□□ -0.91
SHKBP1-204ENST00000594862 LCE2CQ5TA81 110 aa9.39□□□□□ -0.91
SHKBP1-204ENST00000594862 Q96NJ1 140 aa9.39□□□□□ -0.91
SHKBP1-204ENST00000594862 CCKP06307 115 aa9.38□□□□□ -0.91
SHKBP1-204ENST00000594862 KRTAP19-2Q3LHN2 52 aa9.38□□□□□ -0.91
SHKBP1-204ENST00000594862 SIGMAR1Q99720 223 aa9.38□□□□□ -0.91
SHKBP1-204ENST00000594862 A0A1B0GV72 72 aa9.37□□□□□ -0.91
SHKBP1-204ENST00000594862 C21orf62-AS1Q17RA5 79 aa9.36□□□□□ -0.91
SHKBP1-204ENST00000594862 C20orf166-AS1Q96NR2 134 aa9.35□□□□□ -0.91
SHKBP1-204ENST00000594862 RBM3P98179 157 aaKnown RBP9.34□□□□□ -0.91
SHKBP1-204ENST00000594862 DSCR8Q96T75 97 aa9.34□□□□□ -0.91
SHKBP1-204ENST00000594862 CRCT1Q9UGL9 99 aa9.34□□□□□ -0.91
SHKBP1-204ENST00000594862 COX6B2Q6YFQ2 88 aa9.33□□□□□ -0.92
SHKBP1-204ENST00000594862 A8MUU9 505 aa9.32□□□□□ -0.92
SHKBP1-204ENST00000594862 IGKV4-1P06312 121 aa9.32□□□□□ -0.92
SHKBP1-204ENST00000594862 MT1HP80294 61 aa9.31□□□□□ -0.92
SHKBP1-204ENST00000594862 ATXN8Q156A1 80 aa9.31□□□□□ -0.92
SHKBP1-204ENST00000594862 FSIP2Q5CZC0 6907 aa9.31□□□□□ -0.92
SHKBP1-204ENST00000594862 LYRM7Q5U5X0 104 aa9.3□□□□□ -0.92
SHKBP1-204ENST00000594862 TSTD3H0UI37 97 aa9.29□□□□□ -0.92
SHKBP1-204ENST00000594862 BAALC-AS2P0C853 105 aa9.29□□□□□ -0.92
SHKBP1-204ENST00000594862 LINC00313P59037 77 aa9.29□□□□□ -0.92
SHKBP1-204ENST00000594862 DSCR10P59022 87 aa9.28□□□□□ -0.92
SHKBP1-204ENST00000594862 VPS25Q9BRG1 176 aa9.28□□□□□ -0.92
SHKBP1-204ENST00000594862 LINC00472Q9H8W2 130 aa9.28□□□□□ -0.92
SHKBP1-204ENST00000594862 C9JAW5 83 aa9.27□□□□□ -0.93
SHKBP1-204ENST00000594862 JMJD7-PLA2G4BH0Y9G9 81 aa9.25□□□□□ -0.93
SHKBP1-204ENST00000594862 A0A1B0GW54 56 aa9.22□□□□□ -0.93
SHKBP1-204ENST00000594862 J3KT08 172 aa9.22□□□□□ -0.93
SHKBP1-204ENST00000594862 TRBV20-1A0A075B6N2 111 aa9.21□□□□□ -0.94
SHKBP1-204ENST00000594862 C8orf87E5RJ46 101 aa9.21□□□□□ -0.94
SHKBP1-204ENST00000594862 PDE6GP18545 87 aa9.21□□□□□ -0.94
SHKBP1-204ENST00000594862 IGHV6-1A0A0B4J1U7 121 aa9.2□□□□□ -0.94
SHKBP1-204ENST00000594862 M0R2T5 61 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms