RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 CCDC179H3BU77 68 aa3.68□□□□□ -1.82
SDF2-206ENST00000587788 Q6ZR54 194 aa3.68□□□□□ -1.82
SDF2-206ENST00000587788 Q6ZRX8 168 aa3.68□□□□□ -1.82
SDF2-206ENST00000587788 SERP2Q8N6R1 65 aa3.68□□□□□ -1.82
SDF2-206ENST00000587788 BIRC6Q9NR09 4857 aa3.68□□□□□ -1.82
SDF2-206ENST00000587788 DNAH2Q9P225 4427 aa3.68□□□□□ -1.82
SDF2-206ENST00000587788 IGLV5-48A0A075B6I7 105 aa3.67□□□□□ -1.82
SDF2-206ENST00000587788 KRTAP4-16G5E9R7 235 aaPredicted RBP3.67□□□□□ -1.82
SDF2-206ENST00000587788 RTL8CO15255 209 aa3.67□□□□□ -1.82
SDF2-206ENST00000587788 CRYGAP11844 174 aa3.67□□□□□ -1.82
SDF2-206ENST00000587788 C1orf134Q5TEV5 83 aa3.67□□□□□ -1.82
SDF2-206ENST00000587788 Q6ZVQ6 151 aa3.67□□□□□ -1.82
SDF2-206ENST00000587788 MRPL55Q7Z7F7 128 aaKnown RBP3.67□□□□□ -1.82
SDF2-206ENST00000587788 KRTAP1-5Q9BYS1 174 aa3.67□□□□□ -1.82
SDF2-206ENST00000587788 FAT2Q9NYQ8 4349 aa3.66□□□□□ -1.82
SDF2-206ENST00000587788 C16orf90A8MZG2 172 aa3.66□□□□□ -1.82
SDF2-206ENST00000587788 FUSP35637 526 aaKnown RBP eCLIP3.66□□□□□ -1.82
SDF2-206ENST00000587788 LINC01547P58512 204 aaPredicted RBP3.66□□□□□ -1.82
SDF2-206ENST00000587788 C9orf153Q5TBE3 101 aa3.66□□□□□ -1.82
SDF2-206ENST00000587788 HAMPP81172 84 aa3.65□□□□□ -1.83
SDF2-206ENST00000587788 REG3GQ6UW15 175 aa3.65□□□□□ -1.83
SDF2-206ENST00000587788 Q8N377 158 aa3.65□□□□□ -1.83
SDF2-206ENST00000587788 LINC00474Q9P2X8 69 aa3.65□□□□□ -1.83
SDF2-206ENST00000587788 DNAH17Q9UFH2 4485 aa3.65□□□□□ -1.83
SDF2-206ENST00000587788 A0A1B0GVY2 172 aa3.64□□□□□ -1.83
SDF2-206ENST00000587788 LRCOL1A6NCL2 159 aa3.64□□□□□ -1.83
SDF2-206ENST00000587788 RPL37AP8A6NKH3 93 aa3.64□□□□□ -1.83
SDF2-206ENST00000587788 NREPQ16612 68 aa3.64□□□□□ -1.83
SDF2-206ENST00000587788 Q6ZRN7 208 aaPredicted RBP3.64□□□□□ -1.83
SDF2-206ENST00000587788 FAM19A5Q7Z5A7 132 aaPredicted RBP3.64□□□□□ -1.83
SDF2-206ENST00000587788 C9orf163Q8N9P6 203 aa3.64□□□□□ -1.83
SDF2-206ENST00000587788 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
SDF2-206ENST00000587788 PKD1P98161 4303 aa3.63□□□□□ -1.83
SDF2-206ENST00000587788 TRAV7A0A075B6U4 112 aa3.63□□□□□ -1.83
SDF2-206ENST00000587788 A0A087WVE0 104 aa3.63□□□□□ -1.83
SDF2-206ENST00000587788 FAM168BA1KXE4 195 aa3.63□□□□□ -1.83
SDF2-206ENST00000587788 F8WEM9 126 aa3.63□□□□□ -1.83
SDF2-206ENST00000587788 H0Y9J4 135 aa3.63□□□□□ -1.83
SDF2-206ENST00000587788 UBE2BP63146 152 aa3.63□□□□□ -1.83
SDF2-206ENST00000587788 FAM19A1Q7Z5A9 133 aa3.63□□□□□ -1.83
SDF2-206ENST00000587788 DEFB105AQ8NG35 78 aa3.63□□□□□ -1.83
SDF2-206ENST00000587788 Q9BRP9 147 aa3.63□□□□□ -1.83
SDF2-206ENST00000587788 HECTD4Q9Y4D8 3996 aa3.62□□□□□ -1.83
SDF2-206ENST00000587788 A0A087WTM6 91 aa3.62□□□□□ -1.83
SDF2-206ENST00000587788 KRTAP7-1Q8IUC3 87 aa3.62□□□□□ -1.83
SDF2-206ENST00000587788 SS18L2Q9UHA2 77 aa3.62□□□□□ -1.83
SDF2-206ENST00000587788 A0A096LNI7 61 aa3.61□□□□□ -1.83
SDF2-206ENST00000587788 BPY2O14599 106 aa3.61□□□□□ -1.83
SDF2-206ENST00000587788 TMEM258P61165 79 aa3.61□□□□□ -1.83
SDF2-206ENST00000587788 C1orf137Q5JT78 98 aa3.61□□□□□ -1.83
SDF2-206ENST00000587788 LINC00336Q6ZUF6 198 aa3.61□□□□□ -1.83
SDF2-206ENST00000587788 PRR26Q8N8Z3 221 aa3.61□□□□□ -1.83
SDF2-206ENST00000587788 Q8NBF4 154 aa3.61□□□□□ -1.83
SDF2-206ENST00000587788 DPH3Q96FX2 82 aa3.61□□□□□ -1.83
SDF2-206ENST00000587788 DNAH11Q96DT5 4516 aa3.61□□□□□ -1.83
SDF2-206ENST00000587788 DYNC1H1Q14204 4646 aaKnown RBP3.61□□□□□ -1.83
SDF2-206ENST00000587788 PKHD1P08F94 4074 aa3.6□□□□□ -1.83
SDF2-206ENST00000587788 KIAA1109Q2LD37 5005 aa3.6□□□□□ -1.83
SDF2-206ENST00000587788 IGLV8-61A0A075B6I0 122 aa3.6□□□□□ -1.83
SDF2-206ENST00000587788 ERC2-IT1O76042 136 aa3.6□□□□□ -1.83
SDF2-206ENST00000587788 SPRR4Q96PI1 79 aa3.6□□□□□ -1.83
SDF2-206ENST00000587788 IGKV2-24A0A0C4DH68 120 aa3.59□□□□□ -1.83
SDF2-206ENST00000587788 A0A1W2PNN7 141 aa3.59□□□□□ -1.83
SDF2-206ENST00000587788 SPRR1BP22528 89 aa3.59□□□□□ -1.83
SDF2-206ENST00000587788 SEC61BP60468 96 aaKnown RBP3.59□□□□□ -1.83
SDF2-206ENST00000587788 RPS28P62857 69 aaKnown RBP3.59□□□□□ -1.83
SDF2-206ENST00000587788 ST20-AS1Q8NBB2 130 aa3.59□□□□□ -1.83
SDF2-206ENST00000587788 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.58□□□□□ -1.84
SDF2-206ENST00000587788 A0A1W2PNM2 257 aa3.58□□□□□ -1.84
SDF2-206ENST00000587788 NDUFC1O43677 76 aa3.58□□□□□ -1.84
SDF2-206ENST00000587788 SMIM29Q86T20 159 aa3.58□□□□□ -1.84
SDF2-206ENST00000587788 IGLV5-52A0A0A0MRZ9 124 aa3.57□□□□□ -1.84
SDF2-206ENST00000587788 EPM2AB3EWF7 344 aa3.57□□□□□ -1.84
SDF2-206ENST00000587788 IGKV4-1P06312 121 aa3.57□□□□□ -1.84
SDF2-206ENST00000587788 DNAH5Q8TE73 4624 aa3.57□□□□□ -1.84
SDF2-206ENST00000587788 HERC2O95714 4834 aa3.56□□□□□ -1.84
SDF2-206ENST00000587788 J3KT08 172 aa3.56□□□□□ -1.84
SDF2-206ENST00000587788 UBE2AP49459 152 aa3.56□□□□□ -1.84
SDF2-206ENST00000587788 KLKP1Q107X0 134 aa3.56□□□□□ -1.84
SDF2-206ENST00000587788 SCXQ7RTU7 201 aa3.56□□□□□ -1.84
SDF2-206ENST00000587788 HIGD2AQ9BW72 106 aa3.56□□□□□ -1.84
SDF2-206ENST00000587788 KRTAP17-1Q9BYP8 105 aa3.56□□□□□ -1.84
SDF2-206ENST00000587788 RPL37AP61513 92 aaKnown RBP3.55□□□□□ -1.84
SDF2-206ENST00000587788 PRLHP81277 87 aa3.55□□□□□ -1.84
SDF2-206ENST00000587788 Q75L30 129 aa3.55□□□□□ -1.84
SDF2-206ENST00000587788 PHF5AQ7RTV0 110 aaKnown RBP3.55□□□□□ -1.84
SDF2-206ENST00000587788 C20orf197Q8N268 126 aa3.55□□□□□ -1.84
SDF2-206ENST00000587788 RYR1P21817 5038 aa3.55□□□□□ -1.84
SDF2-206ENST00000587788 CHTF8P0CG12 524 aa3.54□□□□□ -1.84
SDF2-206ENST00000587788 ATP5EP56381 51 aaPredicted RBP3.54□□□□□ -1.84
SDF2-206ENST00000587788 IGFL1Q6UW32 110 aa3.54□□□□□ -1.84
SDF2-206ENST00000587788 SPACA4Q8TDM5 124 aa3.54□□□□□ -1.84
SDF2-206ENST00000587788 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
SDF2-206ENST00000587788 ZNF706Q9Y5V0 76 aaPredicted RBP3.54□□□□□ -1.84
SDF2-206ENST00000587788 LRP1BQ9NZR2 4599 aa3.54□□□□□ -1.84
SDF2-206ENST00000587788 APOBP04114 4563 aaKnown RBP3.53□□□□□ -1.84
SDF2-206ENST00000587788 KRTAP13-1Q8IUC0 172 aa3.53□□□□□ -1.84
SDF2-206ENST00000587788 OCR1Q9BZK8 76 aa3.53□□□□□ -1.84
SDF2-206ENST00000587788 PLAC8Q9NZF1 115 aa3.53□□□□□ -1.84
SDF2-206ENST00000587788 HSPG2P98160 4391 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms