RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 RNASE13Q5GAN3 156 aaKnown RBP3.03□□□□□ -1.92
ZNF540-204ENST00000586792 LINC00269Q8N2A0 174 aa3.03□□□□□ -1.92
ZNF540-204ENST00000586792 C20orf203Q8NBC4 194 aa3.03□□□□□ -1.92
ZNF540-204ENST00000586792 RPL39LQ96EH5 51 aaKnown RBP3.03□□□□□ -1.92
ZNF540-204ENST00000586792 IGLV10-54A0A075B6I4 117 aa3.02□□□□□ -1.93
ZNF540-204ENST00000586792 IGKV3OR2-268A0A0C4DH90 116 aa3.02□□□□□ -1.93
ZNF540-204ENST00000586792 TRBV10-3A0A0K0K1G6 114 aa3.02□□□□□ -1.93
ZNF540-204ENST00000586792 hADV29S1A0JD25 119 aa3.02□□□□□ -1.93
ZNF540-204ENST00000586792 LRCOL1A6NCL2 159 aa3.02□□□□□ -1.93
ZNF540-204ENST00000586792 H7C423 109 aa3.02□□□□□ -1.93
ZNF540-204ENST00000586792 TCL1BO95988 128 aa3.02□□□□□ -1.93
ZNF540-204ENST00000586792 FUSP35637 526 aaKnown RBP eCLIP3.02□□□□□ -1.93
ZNF540-204ENST00000586792 UBE2D1P51668 147 aa3.02□□□□□ -1.93
ZNF540-204ENST00000586792 FXYD2P54710 66 aa3.02□□□□□ -1.93
ZNF540-204ENST00000586792 NTM-AS1Q6ZSK4 140 aa3.02□□□□□ -1.93
ZNF540-204ENST00000586792 FAM19A2Q8N3H0 131 aa3.02□□□□□ -1.93
ZNF540-204ENST00000586792 DEFB104AQ8WTQ1 72 aa3.02□□□□□ -1.93
ZNF540-204ENST00000586792 PKHD1P08F94 4074 aa3.01□□□□□ -1.93
ZNF540-204ENST00000586792 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.01□□□□□ -1.93
ZNF540-204ENST00000586792 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.01□□□□□ -1.93
ZNF540-204ENST00000586792 A0A0B4J2C4 111 aa3.01□□□□□ -1.93
ZNF540-204ENST00000586792 TRBV6-5A0A0K0K1A5 114 aa3.01□□□□□ -1.93
ZNF540-204ENST00000586792 IGKV2-29A2NJV5 120 aaPredicted RBP3.01□□□□□ -1.93
ZNF540-204ENST00000586792 K7EMI3 77 aa3.01□□□□□ -1.93
ZNF540-204ENST00000586792 LEPROTO15243 131 aa3.01□□□□□ -1.93
ZNF540-204ENST00000586792 CKS2P33552 79 aa3.01□□□□□ -1.93
ZNF540-204ENST00000586792 IFI27P40305 119 aaPredicted RBP3.01□□□□□ -1.93
ZNF540-204ENST00000586792 KLKP1Q107X0 134 aa3.01□□□□□ -1.93
ZNF540-204ENST00000586792 MRPL51Q4U2R6 128 aaKnown RBP3.01□□□□□ -1.93
ZNF540-204ENST00000586792 ENHOQ6UWT2 76 aa3.01□□□□□ -1.93
ZNF540-204ENST00000586792 SCGB3A1Q96QR1 104 aa3.01□□□□□ -1.93
ZNF540-204ENST00000586792 OPRPNQ99935 248 aaPredicted RBP3.01□□□□□ -1.93
ZNF540-204ENST00000586792 LINC01546A6NGU7 62 aa3□□□□□ -1.93
ZNF540-204ENST00000586792 TSPEAR-AS2P59090 65 aa3□□□□□ -1.93
ZNF540-204ENST00000586792 ASB16-AS1Q495Z4 193 aa3□□□□□ -1.93
ZNF540-204ENST00000586792 PRR34Q9NV39 138 aa3□□□□□ -1.93
ZNF540-204ENST00000586792 IGLV4-60A0A075B6I1 120 aa2.99□□□□□ -1.93
ZNF540-204ENST00000586792 TRBV30A0A0K0K1B3 111 aa2.99□□□□□ -1.93
ZNF540-204ENST00000586792 ERC2-IT1O76042 136 aa2.99□□□□□ -1.93
ZNF540-204ENST00000586792 SS18Q15532 418 aa2.99□□□□□ -1.93
ZNF540-204ENST00000586792 C7orf65Q6ZTY9 151 aa2.99□□□□□ -1.93
ZNF540-204ENST00000586792 PCP2Q8IVA1 136 aa2.99□□□□□ -1.93
ZNF540-204ENST00000586792 Q8N377 158 aa2.99□□□□□ -1.93
ZNF540-204ENST00000586792 LRP1BQ9NZR2 4599 aa2.98□□□□□ -1.93
ZNF540-204ENST00000586792 DNAH5Q8TE73 4624 aa2.98□□□□□ -1.93
ZNF540-204ENST00000586792 TRAV12-1A0A0B4J245 112 aa2.98□□□□□ -1.93
ZNF540-204ENST00000586792 LOC107984156A0A0G2JMH3 177 aa2.98□□□□□ -1.93
ZNF540-204ENST00000586792 A0A1B0GVX0 72 aa2.98□□□□□ -1.93
ZNF540-204ENST00000586792 D6R8Y8 96 aa2.98□□□□□ -1.93
ZNF540-204ENST00000586792 K7ERJ3 54 aa2.98□□□□□ -1.93
ZNF540-204ENST00000586792 SMR3BP02814 79 aaPredicted RBP2.98□□□□□ -1.93
ZNF540-204ENST00000586792 XCL1P47992 114 aa2.98□□□□□ -1.93
ZNF540-204ENST00000586792 POLR2KP53803 58 aaKnown RBP2.98□□□□□ -1.93
ZNF540-204ENST00000586792 HAMPP81172 84 aa2.98□□□□□ -1.93
ZNF540-204ENST00000586792 Q1RN00 199 aa2.98□□□□□ -1.93
ZNF540-204ENST00000586792 Q5VSD8 79 aa2.98□□□□□ -1.93
ZNF540-204ENST00000586792 Q6JHZ5 121 aa2.98□□□□□ -1.93
ZNF540-204ENST00000586792 ARL17AQ8IVW1 177 aa2.98□□□□□ -1.93
ZNF540-204ENST00000586792 DSCR8Q96T75 97 aa2.98□□□□□ -1.93
ZNF540-204ENST00000586792 TIMM21Q9BVV7 248 aa2.98□□□□□ -1.93
ZNF540-204ENST00000586792 MRPL35Q9NZE8 188 aaKnown RBP2.98□□□□□ -1.93
ZNF540-204ENST00000586792 PRO1854Q9UHT4 67 aa2.98□□□□□ -1.93
ZNF540-204ENST00000586792 HSPG2P98160 4391 aa2.97□□□□□ -1.93
ZNF540-204ENST00000586792 APOBP04114 4563 aaKnown RBP2.97□□□□□ -1.93
ZNF540-204ENST00000586792 IGHV3-64A0A075B6Q5 118 aa2.97□□□□□ -1.93
ZNF540-204ENST00000586792 TRAV13-2A0A0B4J235 113 aa2.97□□□□□ -1.93
ZNF540-204ENST00000586792 TMEM223A0PJW6 202 aa2.97□□□□□ -1.93
ZNF540-204ENST00000586792 A6NED7 52 aa2.97□□□□□ -1.93
ZNF540-204ENST00000586792 DIRC1Q969H9 104 aa2.97□□□□□ -1.93
ZNF540-204ENST00000586792 SMIM2Q9BVW6 85 aa2.97□□□□□ -1.93
ZNF540-204ENST00000586792 KIAA1109Q2LD37 5005 aa2.97□□□□□ -1.93
ZNF540-204ENST00000586792 LINC00959A0A1B0GUT2 108 aa2.96□□□□□ -1.94
ZNF540-204ENST00000586792 TIMM17BO60830 172 aa2.96□□□□□ -1.94
ZNF540-204ENST00000586792 CCKP06307 115 aa2.96□□□□□ -1.94
ZNF540-204ENST00000586792 CNBPP62633 177 aaKnown RBP2.96□□□□□ -1.94
ZNF540-204ENST00000586792 Q1T7F1 81 aa2.96□□□□□ -1.94
ZNF540-204ENST00000586792 HIGD2BQ4VC39 106 aa2.96□□□□□ -1.94
ZNF540-204ENST00000586792 C2orf82Q6UX34 121 aa2.96□□□□□ -1.94
ZNF540-204ENST00000586792 ATP11AUNQ6ZP68 121 aa2.96□□□□□ -1.94
ZNF540-204ENST00000586792 C9orf163Q8N9P6 203 aa2.96□□□□□ -1.94
ZNF540-204ENST00000586792 CDC42SE2Q9NRR3 84 aa2.96□□□□□ -1.94
ZNF540-204ENST00000586792 UBE2D4Q9Y2X8 147 aa2.96□□□□□ -1.94
ZNF540-204ENST00000586792 HERC2O95714 4834 aa2.95□□□□□ -1.94
ZNF540-204ENST00000586792 TRAV7A0A075B6U4 112 aa2.95□□□□□ -1.94
ZNF540-204ENST00000586792 GVQW2A0A096LPI5 108 aaPredicted RBP2.95□□□□□ -1.94
ZNF540-204ENST00000586792 KRTAP26-1Q6PEX3 210 aa2.95□□□□□ -1.94
ZNF540-204ENST00000586792 Q6ZSA8 131 aa2.95□□□□□ -1.94
ZNF540-204ENST00000586792 IGKV2-24A0A0C4DH68 120 aa2.94□□□□□ -1.94
ZNF540-204ENST00000586792 RPL39P62891 51 aaKnown RBP2.94□□□□□ -1.94
ZNF540-204ENST00000586792 SOSTDC1Q6X4U4 206 aa2.94□□□□□ -1.94
ZNF540-204ENST00000586792 FP248Q71RG6 208 aaPredicted RBP2.94□□□□□ -1.94
ZNF540-204ENST00000586792 Q8N8P6 123 aa2.94□□□□□ -1.94
ZNF540-204ENST00000586792 C15orf56Q8N910 161 aa2.94□□□□□ -1.94
ZNF540-204ENST00000586792 CIRBP-AS1Q8TBR5 109 aa2.94□□□□□ -1.94
ZNF540-204ENST00000586792 TTTY13Q9BZ97 58 aa2.94□□□□□ -1.94
ZNF540-204ENST00000586792 LINC00474Q9P2X8 69 aa2.94□□□□□ -1.94
ZNF540-204ENST00000586792 F8VRH5 84 aa2.93□□□□□ -1.94
ZNF540-204ENST00000586792 H7BZZ5 65 aa2.93□□□□□ -1.94
ZNF540-204ENST00000586792 TLX1NBP0CAT3 122 aa2.93□□□□□ -1.94
ZNF540-204ENST00000586792 RPL37AP61513 92 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms