RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 Q9BRP9 147 aa3.85□□□□□ -1.79
LIG3-206ENST00000586058 C14orf132Q9NPU4 83 aa3.85□□□□□ -1.79
LIG3-206ENST00000586058 PSORS1C2Q9UIG4 136 aa3.85□□□□□ -1.79
LIG3-206ENST00000586058 DNAH6Q9C0G6 4158 aa3.85□□□□□ -1.79
LIG3-206ENST00000586058 DNAH1Q9P2D7 4330 aa3.85□□□□□ -1.79
LIG3-206ENST00000586058 VPS25Q9BRG1 176 aa3.84□□□□□ -1.79
LIG3-206ENST00000586058 PLECQ15149 4684 aaKnown RBP3.84□□□□□ -1.8
LIG3-206ENST00000586058 IGLV5-48A0A075B6I7 105 aa3.83□□□□□ -1.8
LIG3-206ENST00000586058 FAM240AA0A1B0GVK7 77 aa3.83□□□□□ -1.8
LIG3-206ENST00000586058 A0A1B0GVY2 172 aa3.83□□□□□ -1.8
LIG3-206ENST00000586058 ZNF861PO60384 105 aa3.83□□□□□ -1.8
LIG3-206ENST00000586058 IGLV7-43P04211 117 aa3.83□□□□□ -1.8
LIG3-206ENST00000586058 LOC110117498A0A087WWA1 95 aa3.82□□□□□ -1.8
LIG3-206ENST00000586058 RPL37AP61513 92 aaKnown RBP3.82□□□□□ -1.8
LIG3-206ENST00000586058 C9orf153Q5TBE3 101 aa3.82□□□□□ -1.8
LIG3-206ENST00000586058 ST20-AS1Q8NBB2 130 aa3.82□□□□□ -1.8
LIG3-206ENST00000586058 FAM30AQ9NZY2 134 aa3.82□□□□□ -1.8
LIG3-206ENST00000586058 VPS13DQ5THJ4 4388 aa3.82□□□□□ -1.8
LIG3-206ENST00000586058 ERC2-IT1O76042 136 aa3.81□□□□□ -1.8
LIG3-206ENST00000586058 CCKP06307 115 aa3.81□□□□□ -1.8
LIG3-206ENST00000586058 Q6JHZ5 121 aa3.81□□□□□ -1.8
LIG3-206ENST00000586058 KRTAP11-1Q8IUC1 163 aa3.81□□□□□ -1.8
LIG3-206ENST00000586058 Q8N377 158 aa3.81□□□□□ -1.8
LIG3-206ENST00000586058 OBSCN-AS1Q96MR7 158 aa3.81□□□□□ -1.8
LIG3-206ENST00000586058 V9GYY9 64 aa3.81□□□□□ -1.8
LIG3-206ENST00000586058 KMT2AQ03164 3969 aa3.8□□□□□ -1.8
LIG3-206ENST00000586058 SPRR1BP22528 89 aa3.8□□□□□ -1.8
LIG3-206ENST00000586058 HAMPP81172 84 aa3.8□□□□□ -1.8
LIG3-206ENST00000586058 KRTAP13-1Q8IUC0 172 aa3.8□□□□□ -1.8
LIG3-206ENST00000586058 SPRR4Q96PI1 79 aa3.8□□□□□ -1.8
LIG3-206ENST00000586058 UBL5Q9BZL1 73 aa3.8□□□□□ -1.8
LIG3-206ENST00000586058 TRBV7-4A0A0J9YYF1 115 aa3.79□□□□□ -1.8
LIG3-206ENST00000586058 A0A1B0GW54 56 aa3.79□□□□□ -1.8
LIG3-206ENST00000586058 PLA2G1BP04054 148 aaKnown RBP3.79□□□□□ -1.8
LIG3-206ENST00000586058 LINC01547P58512 204 aaPredicted RBP3.79□□□□□ -1.8
LIG3-206ENST00000586058 Q6ZQT0 140 aa3.79□□□□□ -1.8
LIG3-206ENST00000586058 C3orf22Q8N5N4 141 aa3.79□□□□□ -1.8
LIG3-206ENST00000586058 Q8NBF4 154 aa3.79□□□□□ -1.8
LIG3-206ENST00000586058 IGLV9-49A0A0B4J1Y8 123 aa3.78□□□□□ -1.8
LIG3-206ENST00000586058 DNAH10Q8IVF4 4471 aa3.78□□□□□ -1.81
LIG3-206ENST00000586058 FRAS1Q86XX4 4008 aa3.77□□□□□ -1.81
LIG3-206ENST00000586058 LINC00483Q53H64 154 aa3.77□□□□□ -1.81
LIG3-206ENST00000586058 ATP5EP2Q5VTU8 51 aa3.77□□□□□ -1.81
LIG3-206ENST00000586058 SPINK6Q6UWN8 80 aa3.77□□□□□ -1.81
LIG3-206ENST00000586058 IGLV8-61A0A075B6I0 122 aa3.76□□□□□ -1.81
LIG3-206ENST00000586058 CDK2AP2O75956 126 aa3.76□□□□□ -1.81
LIG3-206ENST00000586058 SS18L2Q9UHA2 77 aa3.76□□□□□ -1.81
LIG3-206ENST00000586058 MOBPQ13875 183 aa3.75□□□□□ -1.81
LIG3-206ENST00000586058 NREPQ16612 68 aa3.75□□□□□ -1.81
LIG3-206ENST00000586058 FAM229BQ4G0N7 80 aa3.75□□□□□ -1.81
LIG3-206ENST00000586058 IGFL1Q6UW32 110 aa3.75□□□□□ -1.81
LIG3-206ENST00000586058 LINC00643Q86TS7 51 aa3.75□□□□□ -1.81
LIG3-206ENST00000586058 SMIM20Q8N5G0 67 aa3.75□□□□□ -1.81
LIG3-206ENST00000586058 SMR3BP02814 79 aaPredicted RBP3.74□□□□□ -1.81
LIG3-206ENST00000586058 CRYGAP11844 174 aa3.74□□□□□ -1.81
LIG3-206ENST00000586058 KRTAP5-3Q6L8H2 238 aa3.74□□□□□ -1.81
LIG3-206ENST00000586058 SMIM29Q86T20 159 aa3.74□□□□□ -1.81
LIG3-206ENST00000586058 SIGMAR1Q99720 223 aa3.74□□□□□ -1.81
LIG3-206ENST00000586058 OXTP01178 125 aa3.73□□□□□ -1.81
LIG3-206ENST00000586058 XGP55808 180 aa3.73□□□□□ -1.81
LIG3-206ENST00000586058 LINC00846Q9NV44 126 aa3.73□□□□□ -1.81
LIG3-206ENST00000586058 HYDINQ4G0P3 5121 aa3.73□□□□□ -1.81
LIG3-206ENST00000586058 A0A087WSZ3 146 aa3.72□□□□□ -1.81
LIG3-206ENST00000586058 Q6Q795 121 aa3.72□□□□□ -1.81
LIG3-206ENST00000586058 Q6ZVQ6 151 aa3.72□□□□□ -1.81
LIG3-206ENST00000586058 SSBP3-AS1Q7Z2R9 100 aa3.72□□□□□ -1.81
LIG3-206ENST00000586058 LIMD2Q9BT23 127 aa3.72□□□□□ -1.81
LIG3-206ENST00000586058 TRBV7-7A0A0K0K1E9 115 aa3.71□□□□□ -1.82
LIG3-206ENST00000586058 BPY2O14599 106 aa3.71□□□□□ -1.82
LIG3-206ENST00000586058 Q5VSD8 79 aa3.71□□□□□ -1.82
LIG3-206ENST00000586058 TYMSOSQ8TAI1 123 aa3.71□□□□□ -1.82
LIG3-206ENST00000586058 HECTD4Q9Y4D8 3996 aa3.7□□□□□ -1.82
LIG3-206ENST00000586058 DNAH17Q9UFH2 4485 aa3.7□□□□□ -1.82
LIG3-206ENST00000586058 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
LIG3-206ENST00000586058 A0A1W2PNM2 257 aa3.7□□□□□ -1.82
LIG3-206ENST00000586058 HIST1H4AP62805 103 aaKnown RBP3.7□□□□□ -1.82
LIG3-206ENST00000586058 CXCL6P80162 114 aa3.7□□□□□ -1.82
LIG3-206ENST00000586058 CD164Q04900 197 aa3.7□□□□□ -1.82
LIG3-206ENST00000586058 HRCT1Q6UXD1 115 aa3.7□□□□□ -1.82
LIG3-206ENST00000586058 IMUPQ9GZP8 106 aa3.7□□□□□ -1.82
LIG3-206ENST00000586058 J3KT08 172 aa3.69□□□□□ -1.82
LIG3-206ENST00000586058 ANAPC11Q9NYG5 84 aa3.69□□□□□ -1.82
LIG3-206ENST00000586058 DNAH2Q9P225 4427 aa3.69□□□□□ -1.82
LIG3-206ENST00000586058 IGKV3D-7A0A0C4DH55 119 aa3.68□□□□□ -1.82
LIG3-206ENST00000586058 NDUFB1O75438 58 aa3.68□□□□□ -1.82
LIG3-206ENST00000586058 MT-ATP8P03928 68 aa3.68□□□□□ -1.82
LIG3-206ENST00000586058 C4orf26Q17RF5 130 aa3.68□□□□□ -1.82
LIG3-206ENST00000586058 PKD1P98161 4303 aa3.68□□□□□ -1.82
LIG3-206ENST00000586058 A0A087X002 238 aa3.67□□□□□ -1.82
LIG3-206ENST00000586058 SPAG11AQ6PDA7 123 aa3.67□□□□□ -1.82
LIG3-206ENST00000586058 A0A0G2JQZ4 141 aa3.66□□□□□ -1.82
LIG3-206ENST00000586058 KRTAP1-4P0C5Y4 121 aa3.66□□□□□ -1.82
LIG3-206ENST00000586058 PRR26Q8N8Z3 221 aa3.66□□□□□ -1.82
LIG3-206ENST00000586058 LINC00304Q8N9R0 145 aa3.66□□□□□ -1.82
LIG3-206ENST00000586058 SPINK1P00995 79 aa3.65□□□□□ -1.83
LIG3-206ENST00000586058 Q8N1X5 172 aa3.65□□□□□ -1.83
LIG3-206ENST00000586058 PRO0628Q9UI54 55 aa3.65□□□□□ -1.83
LIG3-206ENST00000586058 FAT2Q9NYQ8 4349 aa3.64□□□□□ -1.83
LIG3-206ENST00000586058 FAM236AA0A1B0GUQ0 79 aa3.64□□□□□ -1.83
LIG3-206ENST00000586058 FAM236BA0A1B0GV22 79 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms