RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 KRTAP10-4P60372 401 aaPredicted RBP6.72□□□□□ -1.33
TOP3A-216ENST00000583804 B5MCH6 92 aa6.7□□□□□ -1.34
TOP3A-216ENST00000583804 SPRR1AP35321 89 aa6.7□□□□□ -1.34
TOP3A-216ENST00000583804 NDUFV3P56181 108 aaKnown RBP6.7□□□□□ -1.34
TOP3A-216ENST00000583804 ELOF1P60002 83 aaKnown RBP6.7□□□□□ -1.34
TOP3A-216ENST00000583804 ANAPC13Q9BS18 74 aa6.7□□□□□ -1.34
TOP3A-216ENST00000583804 KRTAP4-5Q9BYR2 181 aa6.7□□□□□ -1.34
TOP3A-216ENST00000583804 KRTAP4-16G5E9R7 235 aaPredicted RBP6.69□□□□□ -1.34
TOP3A-216ENST00000583804 JMJD7-PLA2G4BH0Y9G9 81 aa6.69□□□□□ -1.34
TOP3A-216ENST00000583804 ZNF861PO60384 105 aa6.69□□□□□ -1.34
TOP3A-216ENST00000583804 HIGD2AQ9BW72 106 aa6.69□□□□□ -1.34
TOP3A-216ENST00000583804 VPS13BQ7Z7G8 4022 aa6.69□□□□□ -1.34
TOP3A-216ENST00000583804 H3BQ85 93 aa6.68□□□□□ -1.34
TOP3A-216ENST00000583804 TMEM256-PLSCR3K7ERE1 68 aa6.68□□□□□ -1.34
TOP3A-216ENST00000583804 SMCR5Q8TEV8 140 aa6.68□□□□□ -1.34
TOP3A-216ENST00000583804 Q9BRP9 147 aa6.68□□□□□ -1.34
TOP3A-216ENST00000583804 ERC2-IT1O76042 136 aa6.67□□□□□ -1.34
TOP3A-216ENST00000583804 GAGE2AQ6NT46 116 aa6.67□□□□□ -1.34
TOP3A-216ENST00000583804 LINC00575Q6W349 94 aa6.67□□□□□ -1.34
TOP3A-216ENST00000583804 Q6ZRX8 168 aa6.67□□□□□ -1.34
TOP3A-216ENST00000583804 ABCA13Q86UQ4 5058 aa6.67□□□□□ -1.34
TOP3A-216ENST00000583804 SRRM2Q9UQ35 2752 aaKnown RBP6.67□□□□□ -1.34
TOP3A-216ENST00000583804 TRBV7-6A0A0J9YX20 115 aa6.66□□□□□ -1.34
TOP3A-216ENST00000583804 C14orf132Q9NPU4 83 aa6.66□□□□□ -1.34
TOP3A-216ENST00000583804 hADV29S1A0JD25 119 aa6.66□□□□□ -1.34
TOP3A-216ENST00000583804 SPINK6Q6UWN8 80 aa6.66□□□□□ -1.34
TOP3A-216ENST00000583804 KRTAP13-1Q8IUC0 172 aa6.66□□□□□ -1.34
TOP3A-216ENST00000583804 ST20-AS1Q8NBB2 130 aa6.66□□□□□ -1.34
TOP3A-216ENST00000583804 DEFB105AQ8NG35 78 aa6.66□□□□□ -1.34
TOP3A-216ENST00000583804 H0Y9J4 135 aa6.64□□□□□ -1.35
TOP3A-216ENST00000583804 CCKP06307 115 aa6.64□□□□□ -1.35
TOP3A-216ENST00000583804 LORP23490 312 aaPredicted RBP6.64□□□□□ -1.35
TOP3A-216ENST00000583804 Q6JHZ5 121 aa6.64□□□□□ -1.35
TOP3A-216ENST00000583804 Q6ZQY7 126 aa6.64□□□□□ -1.35
TOP3A-216ENST00000583804 GHRHP01286 108 aa6.62□□□□□ -1.35
TOP3A-216ENST00000583804 KRTAP4-8Q9BYQ9 185 aa6.62□□□□□ -1.35
TOP3A-216ENST00000583804 DHRS4-AS1Q9P1J3 65 aa6.62□□□□□ -1.35
TOP3A-216ENST00000583804 LOC110117498A0A087WWA1 95 aa6.6□□□□□ -1.35
TOP3A-216ENST00000583804 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.6□□□□□ -1.35
TOP3A-216ENST00000583804 LINC00846Q9NV44 126 aa6.6□□□□□ -1.35
TOP3A-216ENST00000583804 ATP5EP2Q5VTU8 51 aa6.6□□□□□ -1.35
TOP3A-216ENST00000583804 ANAPC11Q9NYG5 84 aa6.6□□□□□ -1.35
TOP3A-216ENST00000583804 FAM236AA0A1B0GUQ0 79 aa6.59□□□□□ -1.36
TOP3A-216ENST00000583804 FAM236BA0A1B0GV22 79 aa6.59□□□□□ -1.36
TOP3A-216ENST00000583804 PDE6GP18545 87 aa6.59□□□□□ -1.36
TOP3A-216ENST00000583804 HIST1H4AP62805 103 aaKnown RBP6.59□□□□□ -1.36
TOP3A-216ENST00000583804 C3orf22Q8N5N4 141 aa6.59□□□□□ -1.36
TOP3A-216ENST00000583804 RBM3P98179 157 aaKnown RBP6.57□□□□□ -1.36
TOP3A-216ENST00000583804 Q6ZQT0 140 aa6.57□□□□□ -1.36
TOP3A-216ENST00000583804 ZNF706Q9Y5V0 76 aaPredicted RBP6.57□□□□□ -1.36
TOP3A-216ENST00000583804 FLG2Q5D862 2391 aaPredicted RBP6.56□□□□□ -1.36
TOP3A-216ENST00000583804 SPRR4Q96PI1 79 aa6.56□□□□□ -1.36
TOP3A-216ENST00000583804 CCDC179H3BU77 68 aa6.55□□□□□ -1.36
TOP3A-216ENST00000583804 LINC01547P58512 204 aaPredicted RBP6.55□□□□□ -1.36
TOP3A-216ENST00000583804 Q8N377 158 aa6.55□□□□□ -1.36
TOP3A-216ENST00000583804 SVIPQ8NHG7 77 aa6.54□□□□□ -1.36
TOP3A-216ENST00000583804 LAMTOR3Q9UHA4 124 aa6.54□□□□□ -1.36
TOP3A-216ENST00000583804 PKHD1L1Q86WI1 4243 aa6.54□□□□□ -1.36
TOP3A-216ENST00000583804 ATOX1O00244 68 aa6.53□□□□□ -1.36
TOP3A-216ENST00000583804 KRTAP1-4P0C5Y4 121 aa6.53□□□□□ -1.36
TOP3A-216ENST00000583804 UBL5Q9BZL1 73 aa6.53□□□□□ -1.36
TOP3A-216ENST00000583804 TRBV7-4A0A0J9YYF1 115 aa6.53□□□□□ -1.36
TOP3A-216ENST00000583804 IGLV5-48A0A075B6I7 105 aa6.52□□□□□ -1.37
TOP3A-216ENST00000583804 IGLV9-49A0A0B4J1Y8 123 aa6.52□□□□□ -1.37
TOP3A-216ENST00000583804 IGKV3D-7A0A0C4DH55 119 aa6.52□□□□□ -1.37
TOP3A-216ENST00000583804 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.52□□□□□ -1.37
TOP3A-216ENST00000583804 OXTP01178 125 aa6.52□□□□□ -1.37
TOP3A-216ENST00000583804 PRR26Q8N8Z3 221 aa6.52□□□□□ -1.37
TOP3A-216ENST00000583804 DSCR8Q96T75 97 aa6.52□□□□□ -1.37
TOP3A-216ENST00000583804 A0A0G2JQZ4 141 aa6.51□□□□□ -1.37
TOP3A-216ENST00000583804 UQCRQO14949 82 aa6.51□□□□□ -1.37
TOP3A-216ENST00000583804 CRYGAP11844 174 aa6.51□□□□□ -1.37
TOP3A-216ENST00000583804 FAM229BQ4G0N7 80 aa6.51□□□□□ -1.37
TOP3A-216ENST00000583804 A0A087X002 238 aa6.5□□□□□ -1.37
TOP3A-216ENST00000583804 LINC00483Q53H64 154 aa6.5□□□□□ -1.37
TOP3A-216ENST00000583804 C9orf153Q5TBE3 101 aa6.5□□□□□ -1.37
TOP3A-216ENST00000583804 KRTAP29-1A8MX34 341 aaPredicted RBP6.49□□□□□ -1.37
TOP3A-216ENST00000583804 COX7CP15954 63 aa6.49□□□□□ -1.37
TOP3A-216ENST00000583804 SMIM29Q86T20 159 aa6.49□□□□□ -1.37
TOP3A-216ENST00000583804 LRP1Q07954 4544 aaKnown RBP6.48□□□□□ -1.37
TOP3A-216ENST00000583804 F8WEM9 126 aa6.47□□□□□ -1.37
TOP3A-216ENST00000583804 SPRR1BP22528 89 aa6.47□□□□□ -1.37
TOP3A-216ENST00000583804 MOBPQ13875 183 aa6.47□□□□□ -1.37
TOP3A-216ENST00000583804 KRTAP9-2Q9BYQ4 174 aa6.47□□□□□ -1.37
TOP3A-216ENST00000583804 MYCBP2O75592 4640 aa6.47□□□□□ -1.37
TOP3A-216ENST00000583804 KRTAP10-8P60410 259 aa6.47□□□□□ -1.37
TOP3A-216ENST00000583804 TYMSOSQ8TAI1 123 aa6.47□□□□□ -1.37
TOP3A-216ENST00000583804 FAT3Q8TDW7 4589 aa6.46□□□□□ -1.38
TOP3A-216ENST00000583804 CXCL6P80162 114 aa6.46□□□□□ -1.38
TOP3A-216ENST00000583804 KRTAP13-2Q52LG2 175 aa6.46□□□□□ -1.38
TOP3A-216ENST00000583804 Q6ZVQ6 151 aa6.46□□□□□ -1.38
TOP3A-216ENST00000583804 SERP2Q8N6R1 65 aa6.46□□□□□ -1.38
TOP3A-216ENST00000583804 A0A087WVE0 104 aa6.45□□□□□ -1.38
TOP3A-216ENST00000583804 KRTAP9-6A0A140TA67 174 aa6.45□□□□□ -1.38
TOP3A-216ENST00000583804 HERC1Q15751 4861 aa6.45□□□□□ -1.38
TOP3A-216ENST00000583804 MT1HL1P0DM35 61 aa6.44□□□□□ -1.38
TOP3A-216ENST00000583804 SS18L2Q9UHA2 77 aa6.44□□□□□ -1.38
TOP3A-216ENST00000583804 A0A1B0GW54 56 aa6.43□□□□□ -1.38
TOP3A-216ENST00000583804 HRCT1Q6UXD1 115 aa6.43□□□□□ -1.38
TOP3A-216ENST00000583804 IGFL1Q6UW32 110 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms