RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 OCIAD2Q56VL3 154 aa6.45□□□□□ -1.38
SS18-221ENST00000582448 MRPL55Q7Z7F7 128 aaKnown RBP6.45□□□□□ -1.38
SS18-221ENST00000582448 DPH3Q96FX2 82 aa6.45□□□□□ -1.38
SS18-221ENST00000582448 HMCN2Q8NDA2 5059 aa6.44□□□□□ -1.38
SS18-221ENST00000582448 hADV29S1A0JD25 119 aa6.44□□□□□ -1.38
SS18-221ENST00000582448 H3BQ85 93 aa6.44□□□□□ -1.38
SS18-221ENST00000582448 BAALC-AS2P0C853 105 aa6.44□□□□□ -1.38
SS18-221ENST00000582448 PPDPFLQ8WWR9 84 aa6.44□□□□□ -1.38
SS18-221ENST00000582448 FAM218AQ96MZ4 157 aa6.44□□□□□ -1.38
SS18-221ENST00000582448 ORMDL1Q9P0S3 153 aa6.44□□□□□ -1.38
SS18-221ENST00000582448 C22orf24Q9Y442 160 aa6.44□□□□□ -1.38
SS18-221ENST00000582448 FAM168BA1KXE4 195 aa6.43□□□□□ -1.38
SS18-221ENST00000582448 LINC00575Q6W349 94 aa6.43□□□□□ -1.38
SS18-221ENST00000582448 CIRBP-AS1Q8TBR5 109 aa6.43□□□□□ -1.38
SS18-221ENST00000582448 LINC01600Q96MT4 127 aa6.43□□□□□ -1.38
SS18-221ENST00000582448 KCNQ1DNQ9H478 68 aa6.43□□□□□ -1.38
SS18-221ENST00000582448 ETDCA0A1B0GVM5 59 aa6.42□□□□□ -1.38
SS18-221ENST00000582448 ELOF1P60002 83 aaKnown RBP6.42□□□□□ -1.38
SS18-221ENST00000582448 KRTAP10-4P60372 401 aaPredicted RBP6.42□□□□□ -1.38
SS18-221ENST00000582448 SVIPQ8NHG7 77 aa6.42□□□□□ -1.38
SS18-221ENST00000582448 LINC00167Q96N53 147 aa6.42□□□□□ -1.38
SS18-221ENST00000582448 IGLV1-50A0A075B6I6 118 aa6.41□□□□□ -1.38
SS18-221ENST00000582448 RPL37AP8A6NKH3 93 aa6.41□□□□□ -1.38
SS18-221ENST00000582448 RPL37AP61513 92 aaKnown RBP6.41□□□□□ -1.38
SS18-221ENST00000582448 SDIM1Q6ZPB5 146 aa6.41□□□□□ -1.38
SS18-221ENST00000582448 PRR26Q8N8Z3 221 aa6.41□□□□□ -1.38
SS18-221ENST00000582448 FAT3Q8TDW7 4589 aa6.41□□□□□ -1.38
SS18-221ENST00000582448 TMEM256-PLSCR3K7ERE1 68 aa6.4□□□□□ -1.38
SS18-221ENST00000582448 UBE2BP63146 152 aa6.4□□□□□ -1.38
SS18-221ENST00000582448 REG3GQ6UW15 175 aa6.39□□□□□ -1.39
SS18-221ENST00000582448 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.39□□□□□ -1.39
SS18-221ENST00000582448 DHRS4-AS1Q9P1J3 65 aa6.39□□□□□ -1.39
SS18-221ENST00000582448 TEX49A0A1B0GTD5 131 aa6.37□□□□□ -1.39
SS18-221ENST00000582448 A0A1W2PNN7 141 aa6.37□□□□□ -1.39
SS18-221ENST00000582448 CHTF8P0CG12 524 aa6.37□□□□□ -1.39
SS18-221ENST00000582448 JMJD7-PLA2G4BH0Y9G9 81 aa6.36□□□□□ -1.39
SS18-221ENST00000582448 Q6ZQY7 126 aa6.36□□□□□ -1.39
SS18-221ENST00000582448 SPACA4Q8TDM5 124 aa6.36□□□□□ -1.39
SS18-221ENST00000582448 VPS25Q9BRG1 176 aa6.36□□□□□ -1.39
SS18-221ENST00000582448 PCP4P48539 62 aa6.35□□□□□ -1.39
SS18-221ENST00000582448 Q6ZRX8 168 aa6.35□□□□□ -1.39
SS18-221ENST00000582448 KRTAP7-1Q8IUC3 87 aa6.35□□□□□ -1.39
SS18-221ENST00000582448 LAMTOR3Q9UHA4 124 aa6.35□□□□□ -1.39
SS18-221ENST00000582448 SPRR1AP35321 89 aa6.34□□□□□ -1.39
SS18-221ENST00000582448 A0A0A0MQY5 61 aa6.33□□□□□ -1.4
SS18-221ENST00000582448 MT1HL1P0DM35 61 aa6.33□□□□□ -1.4
SS18-221ENST00000582448 PHF5AQ7RTV0 110 aaKnown RBP6.33□□□□□ -1.4
SS18-221ENST00000582448 FAM19A1Q7Z5A9 133 aa6.33□□□□□ -1.4
SS18-221ENST00000582448 PKHD1L1Q86WI1 4243 aa6.32□□□□□ -1.4
SS18-221ENST00000582448 KRTAP4-16G5E9R7 235 aaPredicted RBP6.31□□□□□ -1.4
SS18-221ENST00000582448 ACYP1P07311 99 aa6.31□□□□□ -1.4
SS18-221ENST00000582448 UBE2AP49459 152 aa6.31□□□□□ -1.4
SS18-221ENST00000582448 KRTAP10-6P60371 365 aaPredicted RBP6.3□□□□□ -1.4
SS18-221ENST00000582448 RBM3P98179 157 aaKnown RBP6.3□□□□□ -1.4
SS18-221ENST00000582448 FAM240AA0A1B0GVK7 77 aa6.29□□□□□ -1.4
SS18-221ENST00000582448 H0Y9J4 135 aa6.29□□□□□ -1.4
SS18-221ENST00000582448 PANO1I0J062 215 aa6.29□□□□□ -1.4
SS18-221ENST00000582448 PDE6GP18545 87 aa6.29□□□□□ -1.4
SS18-221ENST00000582448 GAGE2AQ6NT46 116 aa6.29□□□□□ -1.4
SS18-221ENST00000582448 DEFB105AQ8NG35 78 aa6.29□□□□□ -1.4
SS18-221ENST00000582448 DSCR8Q96T75 97 aa6.29□□□□□ -1.4
SS18-221ENST00000582448 C14orf132Q9NPU4 83 aa6.29□□□□□ -1.4
SS18-221ENST00000582448 PLAC8Q9NZF1 115 aa6.29□□□□□ -1.4
SS18-221ENST00000582448 BCE1O60756 84 aa6.28□□□□□ -1.4
SS18-221ENST00000582448 NDUFV3P56181 108 aaKnown RBP6.28□□□□□ -1.4
SS18-221ENST00000582448 OBSCN-AS1Q96MR7 158 aa6.28□□□□□ -1.4
SS18-221ENST00000582448 HIGD2AQ9BW72 106 aa6.28□□□□□ -1.4
SS18-221ENST00000582448 A0A1B0GV72 72 aa6.27□□□□□ -1.41
SS18-221ENST00000582448 PRLHP81277 87 aa6.27□□□□□ -1.41
SS18-221ENST00000582448 Q9BRP9 147 aa6.27□□□□□ -1.41
SS18-221ENST00000582448 F8WEM9 126 aa6.26□□□□□ -1.41
SS18-221ENST00000582448 RNF213Q63HN8 5207 aa6.26□□□□□ -1.41
SS18-221ENST00000582448 SMCR5Q8TEV8 140 aa6.25□□□□□ -1.41
SS18-221ENST00000582448 LRP2P98164 4655 aa6.25□□□□□ -1.41
SS18-221ENST00000582448 IGLV5-48A0A075B6I7 105 aa6.24□□□□□ -1.41
SS18-221ENST00000582448 LOC110117498A0A087WWA1 95 aa6.24□□□□□ -1.41
SS18-221ENST00000582448 CCKP06307 115 aa6.24□□□□□ -1.41
SS18-221ENST00000582448 KRTAP10-7P60409 375 aaPredicted RBP6.24□□□□□ -1.41
SS18-221ENST00000582448 SIGMAR1Q99720 223 aa6.23□□□□□ -1.41
SS18-221ENST00000582448 ZNF706Q9Y5V0 76 aaPredicted RBP6.23□□□□□ -1.41
SS18-221ENST00000582448 ERC2-IT1O76042 136 aa6.22□□□□□ -1.41
SS18-221ENST00000582448 C1orf137Q5JT78 98 aa6.22□□□□□ -1.41
SS18-221ENST00000582448 KRTAP11-1Q8IUC1 163 aa6.22□□□□□ -1.41
SS18-221ENST00000582448 Q8N377 158 aa6.22□□□□□ -1.41
SS18-221ENST00000582448 ST20-AS1Q8NBB2 130 aa6.22□□□□□ -1.41
SS18-221ENST00000582448 TNXBP22105 4242 aa6.21□□□□□ -1.41
SS18-221ENST00000582448 PSORS1C2Q9UIG4 136 aa6.21□□□□□ -1.42
SS18-221ENST00000582448 Q6ZQT0 140 aa6.2□□□□□ -1.42
SS18-221ENST00000582448 LINC01547P58512 204 aaPredicted RBP6.19□□□□□ -1.42
SS18-221ENST00000582448 UBL5Q9BZL1 73 aa6.19□□□□□ -1.42
SS18-221ENST00000582448 TRBV7-4A0A0J9YYF1 115 aa6.18□□□□□ -1.42
SS18-221ENST00000582448 ZNF861PO60384 105 aa6.18□□□□□ -1.42
SS18-221ENST00000582448 LINC00643Q86TS7 51 aa6.18□□□□□ -1.42
SS18-221ENST00000582448 KRTAP13-1Q8IUC0 172 aa6.17□□□□□ -1.42
SS18-221ENST00000582448 A0A1B0GW54 56 aa6.16□□□□□ -1.42
SS18-221ENST00000582448 IGLV7-43P04211 117 aa6.16□□□□□ -1.42
SS18-221ENST00000582448 SPRR1BP22528 89 aa6.16□□□□□ -1.42
SS18-221ENST00000582448 C3orf22Q8N5N4 141 aa6.16□□□□□ -1.42
SS18-221ENST00000582448 Q6JHZ5 121 aa6.15□□□□□ -1.42
SS18-221ENST00000582448 LINC00846Q9NV44 126 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms