RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 LCE3BQ5TA77 95 aa4.88□□□□□ -1.63
KPNB1-210ENST00000580573 FAM19A1Q7Z5A9 133 aa4.88□□□□□ -1.63
KPNB1-210ENST00000580573 SPRR1BP22528 89 aa4.87□□□□□ -1.63
KPNB1-210ENST00000580573 XGP55808 180 aa4.87□□□□□ -1.63
KPNB1-210ENST00000580573 Q8N377 158 aa4.86□□□□□ -1.63
KPNB1-210ENST00000580573 ZNF861PO60384 105 aa4.85□□□□□ -1.63
KPNB1-210ENST00000580573 VPS13BQ7Z7G8 4022 aa4.85□□□□□ -1.63
KPNB1-210ENST00000580573 TEX49A0A1B0GTD5 131 aa4.84□□□□□ -1.63
KPNB1-210ENST00000580573 JMJD7-PLA2G4BH0Y9G9 81 aa4.84□□□□□ -1.63
KPNB1-210ENST00000580573 IGLV7-43P04211 117 aa4.84□□□□□ -1.63
KPNB1-210ENST00000580573 UBE2AP49459 152 aa4.84□□□□□ -1.63
KPNB1-210ENST00000580573 C1orf137Q5JT78 98 aa4.84□□□□□ -1.63
KPNB1-210ENST00000580573 ST20-AS1Q8NBB2 130 aa4.84□□□□□ -1.63
KPNB1-210ENST00000580573 LINC00483Q53H64 154 aa4.83□□□□□ -1.64
KPNB1-210ENST00000580573 SMIM29Q86T20 159 aa4.83□□□□□ -1.64
KPNB1-210ENST00000580573 HIGD2AQ9BW72 106 aa4.83□□□□□ -1.64
KPNB1-210ENST00000580573 IGLV8-61A0A075B6I0 122 aa4.82□□□□□ -1.64
KPNB1-210ENST00000580573 NDUFV3P56181 108 aaKnown RBP4.82□□□□□ -1.64
KPNB1-210ENST00000580573 KRTAP10-4P60372 401 aaPredicted RBP4.82□□□□□ -1.64
KPNB1-210ENST00000580573 HAMPP81172 84 aa4.82□□□□□ -1.64
KPNB1-210ENST00000580573 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
KPNB1-210ENST00000580573 SPRR4Q96PI1 79 aa4.82□□□□□ -1.64
KPNB1-210ENST00000580573 LOC110117498A0A087WWA1 95 aa4.81□□□□□ -1.64
KPNB1-210ENST00000580573 TRBV7-4A0A0J9YYF1 115 aa4.81□□□□□ -1.64
KPNB1-210ENST00000580573 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
KPNB1-210ENST00000580573 CDK2AP2O75956 126 aa4.81□□□□□ -1.64
KPNB1-210ENST00000580573 FAM240AA0A1B0GVK7 77 aa4.8□□□□□ -1.64
KPNB1-210ENST00000580573 K7ERU9 68 aa4.8□□□□□ -1.64
KPNB1-210ENST00000580573 ZNF706Q9Y5V0 76 aaPredicted RBP4.8□□□□□ -1.64
KPNB1-210ENST00000580573 RBM3P98179 157 aaKnown RBP4.79□□□□□ -1.64
KPNB1-210ENST00000580573 Q6ZQT0 140 aa4.79□□□□□ -1.64
KPNB1-210ENST00000580573 Q8N1X5 172 aa4.79□□□□□ -1.64
KPNB1-210ENST00000580573 C14orf132Q9NPU4 83 aa4.79□□□□□ -1.64
KPNB1-210ENST00000580573 J3QR89 54 aa4.78□□□□□ -1.64
KPNB1-210ENST00000580573 PDE6GP18545 87 aa4.78□□□□□ -1.64
KPNB1-210ENST00000580573 C3orf22Q8N5N4 141 aa4.78□□□□□ -1.64
KPNB1-210ENST00000580573 DEFB105AQ8NG35 78 aa4.78□□□□□ -1.64
KPNB1-210ENST00000580573 LAMTOR3Q9UHA4 124 aa4.78□□□□□ -1.64
KPNB1-210ENST00000580573 RYR1P21817 5038 aa4.77□□□□□ -1.65
KPNB1-210ENST00000580573 EPPK1P58107 5090 aaKnown RBP4.77□□□□□ -1.65
KPNB1-210ENST00000580573 CCKP06307 115 aa4.77□□□□□ -1.65
KPNB1-210ENST00000580573 PCP4P48539 62 aa4.77□□□□□ -1.65
KPNB1-210ENST00000580573 RPL37AP61513 92 aaKnown RBP4.77□□□□□ -1.65
KPNB1-210ENST00000580573 FAT1Q14517 4588 aa4.77□□□□□ -1.65
KPNB1-210ENST00000580573 HSPG2P98160 4391 aa4.77□□□□□ -1.65
KPNB1-210ENST00000580573 ACYP1P07311 99 aa4.76□□□□□ -1.65
KPNB1-210ENST00000580573 KRTAP1-4P0C5Y4 121 aa4.76□□□□□ -1.65
KPNB1-210ENST00000580573 GAGE2AQ6NT46 116 aa4.76□□□□□ -1.65
KPNB1-210ENST00000580573 A0A1B0GW54 56 aa4.75□□□□□ -1.65
KPNB1-210ENST00000580573 FAM229BQ4G0N7 80 aa4.75□□□□□ -1.65
KPNB1-210ENST00000580573 SPINK6Q6UWN8 80 aa4.75□□□□□ -1.65
KPNB1-210ENST00000580573 DSCR8Q96T75 97 aa4.75□□□□□ -1.65
KPNB1-210ENST00000580573 PKHD1L1Q86WI1 4243 aa4.74□□□□□ -1.65
KPNB1-210ENST00000580573 Q6JHZ5 121 aa4.74□□□□□ -1.65
KPNB1-210ENST00000580573 A0A1B0GV72 72 aa4.73□□□□□ -1.65
KPNB1-210ENST00000580573 A0A1W2PNM2 257 aa4.73□□□□□ -1.65
KPNB1-210ENST00000580573 F8WEM9 126 aa4.73□□□□□ -1.65
KPNB1-210ENST00000580573 SMR3BP02814 79 aaPredicted RBP4.73□□□□□ -1.65
KPNB1-210ENST00000580573 Q6Q795 121 aa4.73□□□□□ -1.65
KPNB1-210ENST00000580573 IGFL1Q6UW32 110 aa4.73□□□□□ -1.65
KPNB1-210ENST00000580573 Q8NBF4 154 aa4.73□□□□□ -1.65
KPNB1-210ENST00000580573 KIAA1109Q2LD37 5005 aa4.73□□□□□ -1.65
KPNB1-210ENST00000580573 CRYGAP11844 174 aa4.71□□□□□ -1.66
KPNB1-210ENST00000580573 KRTAP17-1Q9BYP8 105 aa4.71□□□□□ -1.66
KPNB1-210ENST00000580573 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
KPNB1-210ENST00000580573 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
KPNB1-210ENST00000580573 A0A087X002 238 aa4.7□□□□□ -1.66
KPNB1-210ENST00000580573 KRTAP13-2Q52LG2 175 aa4.7□□□□□ -1.66
KPNB1-210ENST00000580573 LINC00846Q9NV44 126 aa4.7□□□□□ -1.66
KPNB1-210ENST00000580573 ANAPC11Q9NYG5 84 aa4.7□□□□□ -1.66
KPNB1-210ENST00000580573 TRBV7-7A0A0K0K1E9 115 aa4.69□□□□□ -1.66
KPNB1-210ENST00000580573 SSBP3-AS1Q7Z2R9 100 aa4.69□□□□□ -1.66
KPNB1-210ENST00000580573 CD164Q04900 197 aa4.68□□□□□ -1.66
KPNB1-210ENST00000580573 MOBPQ13875 183 aa4.68□□□□□ -1.66
KPNB1-210ENST00000580573 Q5VSD8 79 aa4.68□□□□□ -1.66
KPNB1-210ENST00000580573 IGLV9-49A0A0B4J1Y8 123 aa4.67□□□□□ -1.66
KPNB1-210ENST00000580573 A0A0G2JQZ4 141 aa4.67□□□□□ -1.66
KPNB1-210ENST00000580573 C9orf153Q5TBE3 101 aa4.67□□□□□ -1.66
KPNB1-210ENST00000580573 LINC00643Q86TS7 51 aa4.66□□□□□ -1.66
KPNB1-210ENST00000580573 Q6ZVQ6 151 aa4.65□□□□□ -1.67
KPNB1-210ENST00000580573 VPS25Q9BRG1 176 aa4.65□□□□□ -1.67
KPNB1-210ENST00000580573 BIRC6Q9NR09 4857 aa4.64□□□□□ -1.67
KPNB1-210ENST00000580573 ATP5EP2Q5VTU8 51 aa4.64□□□□□ -1.67
KPNB1-210ENST00000580573 Q5XG85 94 aa4.64□□□□□ -1.67
KPNB1-210ENST00000580573 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
KPNB1-210ENST00000580573 UBL5Q9BZL1 73 aa4.64□□□□□ -1.67
KPNB1-210ENST00000580573 A0A087WSZ3 146 aa4.63□□□□□ -1.67
KPNB1-210ENST00000580573 RPS29P62273 56 aaKnown RBP4.62□□□□□ -1.67
KPNB1-210ENST00000580573 CXCL6P80162 114 aa4.62□□□□□ -1.67
KPNB1-210ENST00000580573 ASB16-AS1Q495Z4 193 aa4.62□□□□□ -1.67
KPNB1-210ENST00000580573 LINC00472Q9H8W2 130 aa4.62□□□□□ -1.67
KPNB1-210ENST00000580573 MT-ATP8P03928 68 aa4.61□□□□□ -1.67
KPNB1-210ENST00000580573 PRR26Q8N8Z3 221 aa4.61□□□□□ -1.67
KPNB1-210ENST00000580573 Q96NJ1 140 aa4.61□□□□□ -1.67
KPNB1-210ENST00000580573 IMUPQ9GZP8 106 aa4.61□□□□□ -1.67
KPNB1-210ENST00000580573 SS18L2Q9UHA2 77 aa4.61□□□□□ -1.67
KPNB1-210ENST00000580573 LRP1Q07954 4544 aaKnown RBP4.61□□□□□ -1.67
KPNB1-210ENST00000580573 FLG2Q5D862 2391 aaPredicted RBP4.61□□□□□ -1.67
KPNB1-210ENST00000580573 HERC2O95714 4834 aa4.6□□□□□ -1.67
KPNB1-210ENST00000580573 NREPQ16612 68 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms